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PI0019590 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019590
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:20590121..20590875
RNA-Seq ExpressionPI0019590
SyntenyPI0019590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-6560.19Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN PPG++ FA     D +   M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SSGSKRK  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR E+V+QL+ + EL+ +DR R MRILMR+VDDMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-6559.72Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN PPG++  A     D + P M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SSGSKRK  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR E+VR L+ + EL+ +DR R MRILMR+VDDMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+++LQ++
Subjt:  LDYCTIVLQDD

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-6661.06Show/hide
Query:  EQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSIRM
        ++KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN P G++ FA  D +D +   M S GL+MSPDD+M  R+ R+
Subjt:  EQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSIRM

Query:  SEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELKLDY
        SE R  SSGSKRK  G A ++ +I+R+AMEY N+QL  IA+WP  QRQDA+ TR E+VRQL+ + EL+ +DR R MRI+MR+VDDMKAFL+VPD +K  Y
Subjt:  SEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELKLDY

Query:  CTIVLQDD
        C+I+LQ++
Subjt:  CTIVLQDD

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-6761.14Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN P G++ FA     D + P M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SSGSK K  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR E+VRQL+ + EL+ +DR R MRI+MR+VDDMKAFL VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]8.5e-6660.19Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN PPG++ FA     D + P M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SS SKRK  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR ++VRQL+ + EL+ +DR R MRILMR+VDDMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein7.0e-6660.19Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN PPG++ FA     D +   M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SSGSKRK  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR E+V+QL+ + EL+ +DR R MRILMR+VDDMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

A0A5A7TYQ6 Retrotransposon protein2.4e-6661.06Show/hide
Query:  EQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSIRM
        ++KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN P G++ FA  D +D +   M S GL+MSPDD+M  R+ R+
Subjt:  EQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRSIRM

Query:  SEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELKLDY
        SE R  SSGSKRK  G A ++ +I+R+AMEY N+QL  IA+WP  QRQDA+ TR E+VRQL+ + EL+ +DR R MRI+MR+VDDMKAFL+VPD +K  Y
Subjt:  SEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELKLDY

Query:  CTIVLQDD
        C+I+LQ++
Subjt:  CTIVLQDD

A0A5A7TZA5 Retrotransposon protein9.1e-6658.77Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDEQKCI+AEK++FD WV+SHPAAKGLLNK FPHYD+L YVF +D ATGGR+E+F DVGSN P G++ FA    +D +   M S+GL+MSPD++M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SEGR  SSGSK+K GG  +++ +I+R+A+EY N+QL  IA+W   QRQDA+ TR EVVRQL+ + EL+ +DR R MRIL+ +V+DMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+L+++
Subjt:  LDYCTIVLQDD

A0A5A7U4M2 Retrotransposon protein9.8e-6861.14Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCIIAEK++FD WVKSHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN P G++ FA     D + P M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SSGSK K  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR E+VRQL+ + EL+ +DR R MRI+MR+VDDMKAFL VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

A0A5A7VF53 Retrotransposon protein4.1e-6660.19Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS
        WNDE+KCI+AEK++FD W  SHPAAKGLLNK F HYD+L YVFG+DRATGGR+E+F D+GSN PPG++ FA     D + P M S GL+MSPDD+M  R+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTPRS

Query:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK
         R+SE R  SS SKRK  G A ++ +I+R+A+EY N+QL  IA+WP  QRQDA+ TR ++VRQL+ + EL+ +DR R MRILMR+VDDMKAFL+VPD +K
Subjt:  IRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELK

Query:  LDYCTIVLQDD
          YC+I+LQ++
Subjt:  LDYCTIVLQDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein4.4e-0428.81Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDV
        W+   + +I +  L+  ++K+HP A+    KP  ++ DLC ++G   A G  S +  D+
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDV

AT2G24960.2 unknown protein3.6e-0630Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATG
        W+  +  +IA+ D++++++++HP A+    K  P Y +LC++FG++ + G
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATG

AT4G02210.1 unknown protein1.2e-0429.55Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFG
        W++E++ + A+ +++  ++K+H  A+  + +P P+Y DLC + G
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFG

AT4G02210.2 unknown protein1.2e-0429.55Show/hide
Query:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFG
        W++E++ + A+ +++  ++K+H  A+  + +P P+Y DLC + G
Subjt:  WNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCGACCTCGTGTGTCGTCAAAGTACGCGAATGGAATGATGAGCAGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGC
AAAGGGGCTCCTGAACAAACCCTTTCCCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGATCTGAAACCTTCGGTGATGTTGGGTCGA
ACGTGCCTCCAGGCTTCGAAGGGTTTGCCCAGTACGACGGAAACGATGTGGAGAACCCGACGATGTGCAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCA
AGATCGATTCGTATGTCTGAGGGTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAGGGCAGGCATTGGAGGCGGCTGAAATAATTCGCAGTGCCATGGAATATGC
AAATGACCAACTTAAGGCAATTGCAGATTGGCCCAAAGAACAACGACAAGATGCAAGTGTGACACGTGCGGAAGTCGTTAGACAGCTACAGGGAATGTCGGAGCTGAGTC
GACTAGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGATGACATGAAAGCATTTTTAGACGTCCCGGACGAGCTTAAGTTGGATTACTGCACGATCGTACTC
CAGGATGACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCGACCTCGTGTGTCGTCAAAGTACGCGAATGGAATGATGAGCAGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGC
AAAGGGGCTCCTGAACAAACCCTTTCCCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGATCTGAAACCTTCGGTGATGTTGGGTCGA
ACGTGCCTCCAGGCTTCGAAGGGTTTGCCCAGTACGACGGAAACGATGTGGAGAACCCGACGATGTGCAGTCAGGGCCTAGACATGTCACCTGACGACATAATGACTCCA
AGATCGATTCGTATGTCTGAGGGTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAGGGCAGGCATTGGAGGCGGCTGAAATAATTCGCAGTGCCATGGAATATGC
AAATGACCAACTTAAGGCAATTGCAGATTGGCCCAAAGAACAACGACAAGATGCAAGTGTGACACGTGCGGAAGTCGTTAGACAGCTACAGGGAATGTCGGAGCTGAGTC
GACTAGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGATGACATGAAAGCATTTTTAGACGTCCCGGACGAGCTTAAGTTGGATTACTGCACGATCGTACTC
CAGGATGACGCTTGA
Protein sequenceShow/hide protein sequence
MRATSCVVKVREWNDEQKCIIAEKDLFDSWVKSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRSETFGDVGSNVPPGFEGFAQYDGNDVENPTMCSQGLDMSPDDIMTP
RSIRMSEGRPGSSGSKRKHGGQALEAAEIIRSAMEYANDQLKAIADWPKEQRQDASVTRAEVVRQLQGMSELSRLDRARCMRILMRSVDDMKAFLDVPDELKLDYCTIVL
QDDA