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PI0019594 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019594
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpathogenesis-related gene 1
Genome locationchr01:1196254..1196742
RNA-Seq ExpressionPI0019594
SyntenyPI0019594
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR018244 - Allergen V5/Tpx-1-related, conserved site
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN43828.1 hypothetical protein Csa_017229 [Cucumis sativus]8.7e-3589.66Show/hide
Query:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITSRQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        MSKM L + LSALCIVAL LTPIV AQNSPQDF DAHNALTLKI SR+RLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
Subjt:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITSRQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

XP_004137081.1 basic form of pathogenesis-related protein 1 [Cucumis sativus]1.1e-1844.03Show/hide
Query:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLK-------------------ITS--------------------------------------
        M L + LSALCIVAL LTPIV AQNSPQDF DAHNA+  K                   ITS                                      
Subjt:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLK-------------------ITS--------------------------------------

Query:  ------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                          RQ +  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
Subjt:  ------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

XP_004137082.3 basic form of pathogenesis-related protein 1 [Cucumis sativus]3.0e-1131.9Show/hide
Query:  MSKMTLVSVLSALCIVALTLT-PIVFAQNSPQDFVDAHNALTLKITS-----------------------------------------------------
        MS M L +  S++C++ LTLT P++ A N+PQ++VDAHNA+  ++ +                                                     
Subjt:  MSKMTLVSVLSALCIVALTLT-PIVFAQNSPQDFVDAHNALTLKITS-----------------------------------------------------

Query:  ----------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                               Q +  NSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE PY
Subjt:  ----------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

XP_008455067.1 PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo]2.7e-1232.72Show/hide
Query:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------
        MSKM L ++ S++C++ LTL P++ A N+PQ++VDAHNA                       L  K+++                               
Subjt:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------

Query:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                              Q +  NSFL+GCA +KCKNNWSLVSCNYSP+GNV GE PY
Subjt:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

XP_016901700.1 PREDICTED: pathogenesis-related protein PR-1 type-like [Cucumis melo]1.5e-1847.45Show/hide
Query:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITS----------------------------------------------------RQRLK
        M LV+ LS LCIVALTLTPIV AQNSPQDFVDAHNA+  KI +                                                     Q + 
Subjt:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITS----------------------------------------------------RQRLK

Query:  LNSFLVGCATVKCKNNW-SLVSCNYSPSGNVVGERPY
         NSFLVGCATVKCK+NW S++SCNYSPS NVVGERPY
Subjt:  LNSFLVGCATVKCKNNW-SLVSCNYSPSGNVVGERPY

TrEMBL top hitse value%identityAlignment
A0A0A0K2V2 Uncharacterized protein4.2e-3589.66Show/hide
Query:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITSRQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        MSKM L + LSALCIVAL LTPIV AQNSPQDF DAHNALTLKI SR+RLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
Subjt:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITSRQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

A0A0A0K4C6 SCP domain-containing protein1.5e-1131.9Show/hide
Query:  MSKMTLVSVLSALCIVALTLT-PIVFAQNSPQDFVDAHNALTLKITS-----------------------------------------------------
        MS M L +  S++C++ LTLT P++ A N+PQ++VDAHNA+  ++ +                                                     
Subjt:  MSKMTLVSVLSALCIVALTLT-PIVFAQNSPQDFVDAHNALTLKITS-----------------------------------------------------

Query:  ----------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                               Q +  NSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE PY
Subjt:  ----------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

A0A1S3C055 pathogenesis-related protein 1A-like1.3e-1232.72Show/hide
Query:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------
        MSKM L ++ S++C++ LTL P++ A N+PQ++VDAHNA                       L  K+++                               
Subjt:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------

Query:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                              Q +  NSFL+GCA +KCKNNWSLVSCNYSP+GNV GE PY
Subjt:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

A0A1S4E137 pathogenesis-related protein PR-1 type-like7.2e-1947.45Show/hide
Query:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITS----------------------------------------------------RQRLK
        M LV+ LS LCIVALTLTPIV AQNSPQDFVDAHNA+  KI +                                                     Q + 
Subjt:  MTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITS----------------------------------------------------RQRLK

Query:  LNSFLVGCATVKCKNNW-SLVSCNYSPSGNVVGERPY
         NSFLVGCATVKCK+NW S++SCNYSPS NVVGERPY
Subjt:  LNSFLVGCATVKCKNNW-SLVSCNYSPSGNVVGERPY

A0A5D3C911 Pathogenesis-related protein 1A-like1.3e-1232.72Show/hide
Query:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------
        MSKM L ++ S++C++ LTL P++ A N+PQ++VDAHNA                       L  K+++                               
Subjt:  MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNA-----------------------LTLKITS-------------------------------

Query:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
                              Q +  NSFL+GCA +KCKNNWSLVSCNYSP+GNV GE PY
Subjt:  ---------------------RQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

SwissProt top hitse value%identityAlignment
P04284 Pathogenesis-related leaf protein 68.8e-0651.43Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  +GC   +C N W  +SCNY P GN +G+RPY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

P07053 Pathogenesis-related protein 1B1.8e-0662.86Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  VGCA VKC N   +VSCNY P GNV+G+ PY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

P09042 Pathogenesis-related protein 1C5.2e-0660Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  VGCA V+C N   +VSCNY P GNV+G+ PY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

Q04108 Pathogenesis-related leaf protein 43.0e-0657.14Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  +GC   +C N W  +SCNY P GN VGERPY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

Q41359 Pathogenesis-related protein PR-1 type2.0e-0554.29Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  +GCA V+C N    ++CNYSP GN  G+RPY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

Q41359 Pathogenesis-related protein PR-1 type2.7e-0256.67Show/hide
Query:  LSALCIVALTLTPIVFAQNSPQDFVDAHNA
        ++ +C+VAL +     AQNSPQD+VDAHNA
Subjt:  LSALCIVALTLTPIVFAQNSPQDFVDAHNA

Arabidopsis top hitse value%identityAlignment
AT2G14580.1 basic pathogenesis-related protein 15.3e-0648.57Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  +GCA V+C N  +++SCNY P GN   ++PY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

AT2G14610.1 pathogenesis-related gene 14.1e-0652.94Show/hide
Query:  SFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        S  +GCA V+C N  +++SCNY P GN V E+PY
Subjt:  SFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

AT4G33710.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.4e-0662.86Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  VGCA VKC N  + V+CNYS  GNV G RPY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein6.9e-0654.29Show/hide
Query:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        NS  +GCA V+C N  + ++CNY P GN VGE PY
Subjt:  NSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY

AT4G33730.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.5e-0554.84Show/hide
Query:  VGCATVKCKNNWSLVSCNYSPSGNVVGERPY
        +GC   KC N  S+V CNY P+GN +G RPY
Subjt:  VGCATVKCKNNWSLVSCNYSPSGNVVGERPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAATGACACTCGTCTCTGTCCTCTCCGCCCTTTGCATCGTTGCACTAACCCTAACCCCAATCGTCTTTGCTCAAAACAGCCCTCAAGACTTTGTCGACGCGCA
CAATGCACTTACGCTAAAAATTACATCACGTCAAAGATTAAAACTTAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTAGTCTCATGCA
ACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGACCTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAATGACACTCGTCTCTGTCCTCTCCGCCCTTTGCATCGTTGCACTAACCCTAACCCCAATCGTCTTTGCTCAAAACAGCCCTCAAGACTTTGTCGACGCGCA
CAATGCACTTACGCTAAAAATTACATCACGTCAAAGATTAAAACTTAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTAGTCTCATGCA
ACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGACCTTATTAG
Protein sequenceShow/hide protein sequence
MSKMTLVSVLSALCIVALTLTPIVFAQNSPQDFVDAHNALTLKITSRQRLKLNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY