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PI0019606 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019606
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr09:8582197..8582751
RNA-Seq ExpressionPI0019606
SyntenyPI0019606
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046934.1 uncharacterized protein E6C27_scaffold230G001030 [Cucumis melo var. makuwa]5.5e-4768.39Show/hide
Query:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS
        +P S+ + +F   NLVP+ LDSTNY+LWKYQVS ILKAH LF H+D+SLPCP K L SP      E N EYLQWLS DQALITLINATLS S L HVVGS
Subjt:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS

Query:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA
         SSK LW SL+KRYSSN  +NILDLRSALYTIKK+ S+TI QYT +IKA V+K+A
Subjt:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.8e-6174.05Show/hide
Query:  MAASSSESDFTPVIPTSTKSSP--SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEY
        MA  SS+SD    +P ++   P  SSN  VPTSTLFLL NICNLVPI LDSTNY+LWKYQVSSILKAHSLF H+D++LPCP K L S T   + EINPEY
Subjt:  MAASSSESDFTPVIPTSTKSSP--SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEY

Query:  LQWLSRDQALITLINATLSFSTLTHVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA
        LQWLSRDQALITLIN TLS S L HVV SVSSK LWLSLEKRYSSNT SNILDLRSALYTI K+PSE+I+QYTSRIKA V+K+AA
Subjt:  LQWLSRDQALITLINATLSFSTLTHVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA

TYK03217.1 uncharacterized protein E5676_scaffold298G00290 [Cucumis melo var. makuwa]5.5e-4768.39Show/hide
Query:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS
        +P S+ + +F   NLVP+ LDSTNY+LWKYQVS ILKAH LF H+D+SLPCP K L SP      E N EYLQWLS DQALITLINATLS S L HVVGS
Subjt:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS

Query:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA
         SSK LW SL+KRYSSN  +NILDLRSALYTIKK+ S+TI QYT +IKA V+K+A
Subjt:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.5e-4868.71Show/hide
Query:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT
        SSN  VPTSTLFLL NICNLVPI LDSTNY+LWKYQVSSILKAHSLF H+D++LPCP K   S T   + EINPEY+QWLSRDQALITLINATLS S L 
Subjt:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT

Query:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSE----TINQYTSRIKAFVNKI
        HVVGSVSSK LWLSLEKRYSSN  SNILDL  A  +I     E    T+N   +   AF   I
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSE----TINQYTSRIKAFVNKI

XP_016902970.1 PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo]4.1e-5875.78Show/hide
Query:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT
        SSN  +PTSTLFLL +ICNLVPI LDSTNY+LWKYQVSSILKA+S F H+D++LPCP K L   T   + +INPEYLQWLS DQALITLIN TLS S L 
Subjt:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT

Query:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA
        +VVGSVSSK LWLSLEKRYSSNT SNILDL SALYT+KK+PSE+I+QYTSRIKAFV+K+AA
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA

TrEMBL top hitse value%identityAlignment
A0A1S4E4S1 uncharacterized protein LOC1079919682.0e-5875.78Show/hide
Query:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT
        SSN  +PTSTLFLL +ICNLVPI LDSTNY+LWKYQVSSILKA+S F H+D++LPCP K L   T   + +INPEYLQWLS DQALITLIN TLS S L 
Subjt:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT

Query:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA
        +VVGSVSSK LWLSLEKRYSSNT SNILDL SALYT+KK+PSE+I+QYTSRIKAFV+K+AA
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA

A0A5A7T8B0 Retrotransposon protein2.0e-5875.78Show/hide
Query:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT
        SSN  +PTSTLFLL +ICNLVPI LDSTNY+LWKYQVSSILKA+S F H+D++LPCP K L   T   + +INPEYLQWLS DQALITLIN TLS S L 
Subjt:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT

Query:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA
        +VVGSVSSK LWLSLEKRYSSNT SNILDL SALYT+KK+PSE+I+QYTSRIKAFV+K+AA
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA

A0A5A7TVE6 Integrase catalytic domain-containing protein2.7e-4768.39Show/hide
Query:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS
        +P S+ + +F   NLVP+ LDSTNY+LWKYQVS ILKAH LF H+D+SLPCP K L SP      E N EYLQWLS DQALITLINATLS S L HVVGS
Subjt:  VPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLTHVVGS

Query:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA
         SSK LW SL+KRYSSN  +NILDLRSALYTIKK+ S+TI QYT +IKA V+K+A
Subjt:  VSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIA

A0A5A7UZE5 Putative mitochondrial protein8.6e-6274.05Show/hide
Query:  MAASSSESDFTPVIPTSTKSSP--SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEY
        MA  SS+SD    +P ++   P  SSN  VPTSTLFLL NICNLVPI LDSTNY+LWKYQVSSILKAHSLF H+D++LPCP K L S T   + EINPEY
Subjt:  MAASSSESDFTPVIPTSTKSSP--SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEY

Query:  LQWLSRDQALITLINATLSFSTLTHVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA
        LQWLSRDQALITLIN TLS S L HVV SVSSK LWLSLEKRYSSNT SNILDLRSALYTI K+PSE+I+QYTSRIKA V+K+AA
Subjt:  LQWLSRDQALITLINATLSFSTLTHVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAA

A0A5D3CH60 Putative mitochondrial protein4.1e-4868.71Show/hide
Query:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT
        SSN  VPTSTLFLL NICNLVPI LDSTNY+LWKYQVSSILKAHSLF H+D++LPCP K   S T   + EINPEY+QWLSRDQALITLINATLS S L 
Subjt:  SSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALITLINATLSFSTLT

Query:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSE----TINQYTSRIKAFVNKI
        HVVGSVSSK LWLSLEKRYSSN  SNILDL  A  +I     E    T+N   +   AF   I
Subjt:  HVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSE----TINQYTSRIKAFVNKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTAGCTCAGAATCCGACTTCACCCCAGTCATCCCAACCTCCACCAAATCATCTCCTTCAAGCAATACCTTTGTCCCTACTTCCACTCTCTTCTTACTATT
CAATATTTGCAATCTTGTACCCATTTGTTTAGATTCCACCAATTACATCCTTTGGAAGTATCAAGTCTCTTCTATTCTCAAAGCACACTCTCTTTTTGACCACCTTGATG
AATCCCTGCCCTGCCCATCAAAACAGCTTGCCTCACCCACCGCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACATTATCGTTCTCTACCCTTACCCATGTAGTTGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCATATC
CAACATCCTTGATTTAAGGTCTGCCCTTTATACCATAAAAAAATCTCCTTCTGAAACAATCAACCAGTACACCAGCCGCATCAAAGCATTCGTCAACAAAATTGCTGCCA
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCTAGCTCAGAATCCGACTTCACCCCAGTCATCCCAACCTCCACCAAATCATCTCCTTCAAGCAATACCTTTGTCCCTACTTCCACTCTCTTCTTACTATT
CAATATTTGCAATCTTGTACCCATTTGTTTAGATTCCACCAATTACATCCTTTGGAAGTATCAAGTCTCTTCTATTCTCAAAGCACACTCTCTTTTTGACCACCTTGATG
AATCCCTGCCCTGCCCATCAAAACAGCTTGCCTCACCCACCGCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACATTATCGTTCTCTACCCTTACCCATGTAGTTGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCATATC
CAACATCCTTGATTTAAGGTCTGCCCTTTATACCATAAAAAAATCTCCTTCTGAAACAATCAACCAGTACACCAGCCGCATCAAAGCATTCGTCAACAAAATTGCTGCCA
CATAA
Protein sequenceShow/hide protein sequence
MAASSSESDFTPVIPTSTKSSPSSNTFVPTSTLFLLFNICNLVPICLDSTNYILWKYQVSSILKAHSLFDHLDESLPCPSKQLASPTADAHPEINPEYLQWLSRDQALIT
LINATLSFSTLTHVVGSVSSKDLWLSLEKRYSSNTISNILDLRSALYTIKKSPSETINQYTSRIKAFVNKIAAT