CuGenDBv2

Gene ID	PI0019608
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome location	chr02:10958007..10961639
RNA-Seq Expression	PI0019608
Synteny	PI0019608
Gene Ontology terms	NA
InterPro domains	IPR032845 - U11/U12 small nuclear ribonucleoprotein 48kDa protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038392.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa]

0.0e+00

84.28

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

TYJ97003.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa]

0.0e+00

84.28

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

XP_008443753.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo]

0.0e+00

84.26

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKS
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKS
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKS

XP_031743009.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus]

0.0e+00

83.51

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRAINPSLPFPP QTFPNFLPPNPNPN HIHDSSHS+SQHPPLDLSSS SSLNNLIH ANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFYV+CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEG SGNSCFKCPILIQVLMWLA QLSVLYGETNG FFA+NMLRQCILDAA  LLLL SEQKS ESLTL EG HDLEISCSDT+SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNG+      VNC VILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYN I QRACEERKRRCNYRPIIEHDGLPKQQ H           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                +QDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQP+D N+T+NI ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        NDSYGDARHSSG                                 KISSKDKYDRDHYHR  DQSS PSQS KWKRYPNDRDDEV AETRHHETKKL SS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SGGGSSARK S+KLRASDSWK NT DNHSSEHLVFNSF+DRY PS+CHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

XP_031743015.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus]

0.0e+00

83.38

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRAINPSLPFPP QTFPNFLPPNPNPN HIHDSSHS+SQHPPLDLSSS SSLNNLIH ANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFYV+CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEG SGNSCFKCPILIQVLMWLA QLSVLYGETNG FFA+NMLRQCILDAA  LLLL SEQKS ESLTL EG HDLEISCSDT+SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNG+      VNC VILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYN I QRACEERKRRCNYRPIIEHDGLPKQQ H           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQP+D N+T+NI ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        NDSYGDARHSSG                                 KISSKDKYDRDHYHR  DQSS PSQS KWKRYPNDRDDEV AETRHHETKKL SS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SGGGSSARK S+KLRASDSWK NT DNHSSEHLVFNSF+DRY PS+CHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9I2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

84.26

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKS
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKS
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKS

A0A5A7T4I0 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

84.28

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

A0A5D3BCH1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

84.28

Show/hide

Query:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS
        MRA+NPSLPFPPNQTFP+FLPPNPNPN HIHDSSHSESQHP LDL SS SSLN LIHLANQTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHS
Subjt:  MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHS

Query:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------
        LLCPSASL PI+PTQLFQSLLYPQTLHSS QLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFY +CPGVVALSNLDEMSKVFTLP             
Subjt:  LLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP-------------

Query:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL
            MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDH+FLLFRLCFMAIYKEALGFQVAL
Subjt:  ----MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVAL

Query:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV
        EKGNGMEGGS NSCFKCPILIQVLMWLA QLSVLYGETNGKFFA+NMLRQCILDAALR LLLPSEQKS E LTL +GCHDLEISCSD +SVKMNELDQKV
Subjt:  EKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKV

Query:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM
        VNNGNVTG ETVNCRVILVSQVAAAVAALHERFLLEEKIK LRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQ +           
Subjt:  VNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMM

Query:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS
                 +DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIG FVKGPEERGIKSEQP+D NITRNI+ADVHTRGS
Subjt:  FPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHTRGS

Query:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS
        ND  GDARHSSG                                 KIS KDKYDRDHYHR SDQSS PSQS KWKRYPNDRDDEVPAETRHHETKKLASS
Subjt:  NDSYGDARHSSG--------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASS

Query:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR
        SSHGRSSSSS+SG GSSARKDSHKLRASDSWKRNT DNHSSEHLV NSFSDRY PSECHDELED+  TVSRLSKSR
Subjt:  SSHGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD--TVSRLSKSR

A0A6J1KPX5 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2

4.4e-279

69.43

Show/hide

Query:  INPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRH
        +NPSLP   N TFP F P NPNPN  + D     S+ PPLDLSSSLSSL NLIH+ANQTLQSLSYL    TPS   + S  + C+FDRRHRVPPHSLF H
Subjt:  INPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRH

Query:  SLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP------------
        SLLCPSA  P I+PTQL QSLLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DY+D +SNFFY++CPGVVALSN DEMSKVFTLP            
Subjt:  SLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP------------

Query:  -------MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQ
               M S+L GIR+LPSDLW LR EVE+WNDYP+ YS +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDH+FLLFRLCFMAI KEA+GFQ
Subjt:  -------MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQ

Query:  VALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELD
        +ALE GNGMEGGSGN  FKCPIL+QVL+WLA QLSVLYGE +GKFFAINMLRQ IL AA  L LLP EQK  ES TL EG H+L  SCSDT+SV + +LD
Subjt:  VALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELD

Query:  QKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQL
         KV+NN  VTGEETVNCRVI VSQVAAAVAALHERFLLEEKIK LRFSHLQTK+Q VSE+NYISQRACEERKRRC+YRPIIEHDGLPKQQ H        
Subjt:  QKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQL

Query:  PMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHT
                    +D +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVKG EERGIKSEQPTD  ITR+ IAD HT
Subjt:  PMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHT

Query:  RGSNDSYGDARHSSG---------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKK
        +GSN SYG+ RH S                                   K  SKDKYDR+HYHR S++SSSPSQS KWKRYP+DRDDE PAETRHH+++ 
Subjt:  RGSNDSYGDARHSSG---------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKK

Query:  LASSSS--HG-RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD
        L+SSSS  HG RSSSSS+SGG SSARKD HKLRASDSWKRNT DNHSS+ LV NSF+DRY PS+CHD+LEDD
Subjt:  LASSSS--HG-RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD

A0A6J1KU07 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1

1.2e-279

69.56

Show/hide

Query:  INPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRH
        +NPSLP   N TFP F P NPNPN  + D     S+ PPLDLSSSLSSL NLIH+ANQTLQSLSYL    TPS   + S  + C+FDRRHRVPPHSLF H
Subjt:  INPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYL----TPSDFANHSHLLHCHFDRRHRVPPHSLFRH

Query:  SLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP------------
        SLLCPSA  P I+PTQL QSLLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DY+D +SNFFY++CPGVVALSN DEMSKVFTLP            
Subjt:  SLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLP------------

Query:  -------MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQ
               M S+L GIR+LPSDLW LR EVE+WNDYP+ YS +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDH+FLLFRLCFMAI KEA+GFQ
Subjt:  -------MNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQ

Query:  VALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELD
        +ALE GNGMEGGSGN  FKCPIL+QVL+WLA QLSVLYGE +GKFFAINMLRQ IL AA  L LLP EQK  ES TL EG H+L  SCSDT+SV + +LD
Subjt:  VALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELD

Query:  QKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQL
         KV+NN  VTGEETVNCRVI VSQVAAAVAALHERFLLEEKIK LRFSHLQTK+Q VSE+NYISQRACEERKRRC+YRPIIEHDGLPKQQ H        
Subjt:  QKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQL

Query:  PMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHT
                   +QD +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVKG EERGIKSEQPTD  ITR+ IAD HT
Subjt:  PMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGPEERGIKSEQPTDRNITRNIIADVHT

Query:  RGSNDSYGDARHSSG---------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKK
        +GSN SYG+ RH S                                   K  SKDKYDR+HYHR S++SSSPSQS KWKRYP+DRDDE PAETRHH+++ 
Subjt:  RGSNDSYGDARHSSG---------------------------------LKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKK

Query:  LASSSS--HG-RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD
        L+SSSS  HG RSSSSS+SGG SSARKD HKLRASDSWKRNT DNHSS+ LV NSF+DRY PS+CHD+LEDD
Subjt:  LASSSS--HG-RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDD

SwissProt top hits

e value

%identity

Alignment

Q9M8X2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

6.5e-102

38.78

Show/hide

Query:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR
        NP+L   +PP  + PNF    PP P  NP  ++ S   S  P  +LS +LSSL +L+    +TL SLS     D   HS LL          C FD  H 
Subjt:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR

Query:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS
        +PP +LF HSL CP+ +L  I+  + F S  Y  TL    +L         L + D DLC SL D  D  SNFFY +CPG V  S LD   +  TLP   
Subjt:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS

Query:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI
        ++                    + +LPSDL  +++E++ W D+P+ YS  VL SI+GS++   S L  WI+ NS RYGV+ID  +RDH+FLLFRLC  + 
Subjt:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI

Query:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS
         KEA GF++   A + G        +S F+CP+ IQVL WLA QL+VLYGE NGKFFA++M +QCI+++A +++L   E   ++   + E   D  +   
Subjt:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS

Query:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQ
        D    K  E      ++G   G+   + +VI VS+V+AAVAAL+ER LLEEKI+ +R++   T+YQR +E  +++ +A EER RRC+YRPII+HDG P+Q
Subjt:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQ

Query:  QFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQPTD
            R LN               QD +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIG F KG   + R        +
Subjt:  QFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQPTD

Query:  RNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSSHG
         +   +I   D   +G N +   Y      +  K+   D+YD     R   HR    SD+     + R+  ++ + RDDE     RH     +   S   
Subjt:  RNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSSHG

Query:  RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE
          SS  KS      ++D            +  D  S +    N F DRYIP+E
Subjt:  RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE

Arabidopsis top hits

e value

%identity

Alignment

AT3G04160.1 unknown protein

4.6e-103

38.78

Show/hide

Query:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR
        NP+L   +PP  + PNF    PP P  NP  ++ S   S  P  +LS +LSSL +L+    +TL SLS     D   HS LL          C FD  H 
Subjt:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR

Query:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS
        +PP +LF HSL CP+ +L  I+  + F S  Y  TL    +L         L + D DLC SL D  D  SNFFY +CPG V  S LD   +  TLP   
Subjt:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS

Query:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI
        ++                    + +LPSDL  +++E++ W D+P+ YS  VL SI+GS++   S L  WI+ NS RYGV+ID  +RDH+FLLFRLC  + 
Subjt:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI

Query:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS
         KEA GF++   A + G        +S F+CP+ IQVL WLA QL+VLYGE NGKFFA++M +QCI+++A +++L   E   ++   + E   D  +   
Subjt:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS

Query:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQ
        D    K  E      ++G   G+   + +VI VS+V+AAVAAL+ER LLEEKI+ +R++   T+YQR +E  +++ +A EER RRC+YRPII+HDG P+Q
Subjt:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQ

Query:  QFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQPTD
            R LN               QD +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIG F KG   + R        +
Subjt:  QFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQPTD

Query:  RNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSSHG
         +   +I   D   +G N +   Y      +  K+   D+YD     R   HR    SD+     + R+  ++ + RDDE     RH     +   S   
Subjt:  RNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSSHG

Query:  RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE
          SS  KS      ++D            +  D  S +    N F DRYIP+E
Subjt:  RSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE

AT3G04160.2 unknown protein

1.4e-99

38.41

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Query:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR
        NP+L   +PP  + PNF    PP P  NP  ++ S   S  P  +LS +LSSL +L+    +TL SLS     D   HS LL          C FD  H 
Subjt:  NPSL--PFPPNQTFPNFL---PPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLL---------HCHFDRRHR

Query:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS
        +PP +LF HSL CP+ +L  I+  + F S  Y  TL    +L         L + D DLC SL D  D  SNFFY +CPG V  S LD   +  TLP   
Subjt:  VPPHSLFRHSLLCPSASLPPINPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNS

Query:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI
        ++                    + +LPSDL  +++E++ W D+P+ YS  VL SI+GS++   S L  WI+ NS RYGV+ID  +RDH+FLLFRLC  + 
Subjt:  TL------------------NGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAI

Query:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS
         KEA GF++   A + G        +S F+CP+ IQVL WLA QL+VLYGE NGKFFA++M +QCI+++A +++L   E   ++   + E   D  +   
Subjt:  YKEALGFQV---ALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINMLRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCS

Query:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYIS--QRACEERKRRCNYRPIIEHDGLP
        D    K  E      ++G   G+   + +VI VS+V+AAVAAL+ER LLEEKI+ +R++   T+YQR+    ++S       ER RRC+YRPII+HDG P
Subjt:  DTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEYNYIS--QRACEERKRRCNYRPIIEHDGLP

Query:  KQQFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQP
        +Q    R LN               QD +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIG F KG   + R       
Subjt:  KQQFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGRFVKGP--EERGIKSEQP

Query:  TDRNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSS
         + +   +I   D   +G N +   Y      +  K+   D+YD     R   HR    SD+     + R+  ++ + RDDE     RH     +   S 
Subjt:  TDRNITRNI-IADVHTRGSNDS---YGDARHSSGLKISSKDKYD-----RDHYHRL---SDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSS

Query:  HGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE
            SS  KS      ++D            +  D  S +    N F DRYIP+E
Subjt:  HGRSSSSSKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSE

Sequences

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CDS sequence

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ATGAGAGCCATCAACCCTTCTCTTCCATTTCCTCCTAACCAAACATTCCCCAATTTCCTTCCTCCAAACCCTAACCCTAATCCCCATATCCATGATTCTTCACATTCTGA
ATCTCAACATCCTCCTCTCGACTTGTCTTCTTCCCTTTCCTCCCTCAATAACCTCATCCATCTCGCCAATCAAACTCTTCAATCTCTCTCCTACCTCACCCCATCTGATT
TCGCTAACCATTCTCATCTTCTTCACTGCCATTTTGATCGGCGCCACCGTGTCCCCCCGCATTCTCTCTTTCGCCACTCCCTCCTCTGCCCTTCCGCTTCCCTGCCCCCT
ATTAACCCCACCCAACTTTTTCAATCCTTGCTTTACCCTCAAACTCTTCATTCATCTCGTCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCTGATTCGGATGC
AGACCTTTGCTTTTCTCTCACTGATTATACTGATGCCACTTCCAATTTCTTCTATGTTAATTGCCCTGGCGTCGTTGCCTTGTCTAACCTCGATGAAATGTCCAAAGTCT
TCACTCTTCCCATGAACAGTACTTTGAATGGGATACGAATACTTCCATCTGACTTGTGGATTCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAATAAGTATTCG
TTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGGCTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTTT
GAGGGATCATATGTTTTTGCTGTTTAGGTTGTGTTTTATGGCAATCTATAAGGAAGCTTTAGGGTTTCAAGTTGCGTTGGAAAAAGGTAACGGAATGGAGGGTGGATCAG
GGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTAGCATTGCAGCTTTCCGTGTTGTACGGGGAAACAAACGGGAAATTCTTTGCTATTAACATG
CTTAGACAATGTATACTAGATGCTGCATTGCGGTTGTTGCTTTTACCATCCGAACAAAAATCTGCGGAGAGTCTGACTTTAGAAGAGGGTTGTCATGATCTGGAAATTAG
TTGTAGTGATACAAAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCAATGTTACTGGAGAAGAAACGGTCAATTGTAGGGTGATTCTTGTGTCCC
AAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATAAAAAATTTACGCTTTTCTCATCTGCAAACTAAATATCAGCGGGTTTCTGAGTAT
AATTATATCTCTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCACGATGGACTCCCAAAACAGCAGTTTCATATGAGACTGCTTAA
TGTTCAGTTGCCCATGATGTTTCCTGTCTGTTTGTTCTATAAAAAGCAGGATGCAAATAAAACCAAAACAAGGGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTC
GAAGAATGTCATACCGTGGAAAGAAGGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGGCGC
TTTGTGAAGGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAACTGATCGTAATATTACAAGAAATATTATTGCTGATGTGCACACAAGAGGAAGCAATGACTCATA
TGGAGATGCCAGACATAGCTCAGGTCTAAAAATTTCCAGTAAGGATAAATATGATCGAGATCACTATCATAGGTTATCAGATCAAAGCAGTAGTCCTAGCCAGTCTCGCA
AATGGAAGAGATATCCAAATGATCGAGATGATGAGGTGCCAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGGCTTCTAGCAGCTCCCATGGAAGATCATCTTCATCC
TCAAAATCTGGGGGTGGTTCAAGTGCAAGGAAGGATAGCCATAAGTTGAGAGCCAGTGATAGTTGGAAGAGGAACACGGGTGATAATCACAGTTCAGAGCATTTGGTGTT
TAATTCATTTAGTGATAGGTATATCCCATCTGAATGTCATGACGAATTGGAAGATGACACTGTCAGCAGATTATCTAAATCCAGATGA

mRNA sequence

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Protein sequence

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MRAINPSLPFPPNQTFPNFLPPNPNPNPHIHDSSHSESQHPPLDLSSSLSSLNNLIHLANQTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLPP
INPTQLFQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYVNCPGVVALSNLDEMSKVFTLPMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYS
FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHMFLLFRLCFMAIYKEALGFQVALEKGNGMEGGSGNSCFKCPILIQVLMWLALQLSVLYGETNGKFFAINM
LRQCILDAALRLLLLPSEQKSAESLTLEEGCHDLEISCSDTKSVKMNELDQKVVNNGNVTGEETVNCRVILVSQVAAAVAALHERFLLEEKIKNLRFSHLQTKYQRVSEY
NYISQRACEERKRRCNYRPIIEHDGLPKQQFHMRLLNVQLPMMFPVCLFYKKQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGR
FVKGPEERGIKSEQPTDRNITRNIIADVHTRGSNDSYGDARHSSGLKISSKDKYDRDHYHRLSDQSSSPSQSRKWKRYPNDRDDEVPAETRHHETKKLASSSSHGRSSSS
SKSGGGSSARKDSHKLRASDSWKRNTGDNHSSEHLVFNSFSDRYIPSECHDELEDDTVSRLSKSR

PI0019608 (gene) of Melon (PI 482460) v1 genome