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PI0019615 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019615
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type domain-containing protein
Genome locationchr08:20997871..20998472
RNA-Seq ExpressionPI0019615
SyntenyPI0019615
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036326.1 E3 ubiquitin-protein ligase ATL31-like [Cucumis melo var. makuwa]1.5e-4393.41Show/hide
Query:  FPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVDRNGDAIHN
        FP+VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGEN SSEFVAIGVVDRNG+ + N
Subjt:  FPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVDRNGDAIHN

KAG9150666.1 hypothetical protein Leryth_008129 [Lithospermum erythrorhizon]2.3e-2339.31Show/hide
Query:  LLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAH
        L+  L+L PFF +    +AQ++P     +  +LS  + + I++L+   F + FFSVYIRH                                 TFP+ ++
Subjt:  LLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAH

Query:  SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI
        + +K+ ++GK +LECAVCL EF+  ETLRL+PKC HVFHP CIDAWL S  TCP+CRANLA G    +  V +
Subjt:  SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI

KGN48724.1 hypothetical protein Csa_004396 [Cucumis sativus]5.6e-7073.4Show/hide
Query:  MKLPFSFTPNCHSLSLLIILILHPFFTLTLTVQAQQSP--SQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF----------------------
        MKLPFSFTPN HSLSLLII++LHPFF    TVQAQQSP  SQSHLHYLKLSRP+TV +LLLLFIFFI+LFFSVYIRHF                      
Subjt:  MKLPFSFTPNCHSLSLLIILILHPFFTLTLTVQAQQSP--SQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF----------------------

Query:  ---------WTFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD-RNGDA
                   FP+VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRA LAAGEN SSEFVAI VVD  NGD 
Subjt:  ---------WTFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD-RNGDA

Query:  IHN
        +HN
Subjt:  IHN

XP_004139190.1 E3 ubiquitin-protein ligase ATL6 [Cucumis sativus]6.7e-2343.64Show/hide
Query:  HSLSLLIILILHPFFTLTLTVQAQQSPS-QSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFP
        H L L ++L L  F   +++ Q+Q SP  +S  +  +LS  + V I++L+   F + FFSVYIRH                                TFP
Subjt:  HSLSLLIILILHPFFTLTLTVQAQQSPS-QSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFP

Query:  VVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
         + +S +KE K+GK +LECAVCL EF+  ETLRL+PKC HVFHP CIDAWLAS +TCP+CRANL+
Subjt:  VVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

XP_022133016.1 E3 ubiquitin-protein ligase ATL6-like [Momordica charantia]9.3e-2540.93Show/hide
Query:  TPNCHSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLK----LSRPITVAILLLLFIFFIILFFSVYIRHFW--------------------------
        TP    L LL++L    +          Q   ++   YLK    LSRP+ V I++L+ IFFI++F SVY+RH+                           
Subjt:  TPNCHSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLK----LSRPITVAILLLLFIFFIILFFSVYIRHFW--------------------------

Query:  ------TFPVVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD
              TFPVV +   SA+K+       +ECAVCLAEFQH+ETLRL+PKCGHVFHP CIDAWL  CATCP+CRA L +G +S  +  A    D
Subjt:  ------TFPVVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD

TrEMBL top hitse value%identityAlignment
A0A0A0KIT7 RING-type domain-containing protein2.7e-7073.4Show/hide
Query:  MKLPFSFTPNCHSLSLLIILILHPFFTLTLTVQAQQSP--SQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF----------------------
        MKLPFSFTPN HSLSLLII++LHPFF    TVQAQQSP  SQSHLHYLKLSRP+TV +LLLLFIFFI+LFFSVYIRHF                      
Subjt:  MKLPFSFTPNCHSLSLLIILILHPFFTLTLTVQAQQSP--SQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF----------------------

Query:  ---------WTFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD-RNGDA
                   FP+VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRA LAAGEN SSEFVAI VVD  NGD 
Subjt:  ---------WTFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD-RNGDA

Query:  IHN
        +HN
Subjt:  IHN

A0A5A7T2D1 E3 ubiquitin-protein ligase ATL31-like7.4e-4493.41Show/hide
Query:  FPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVDRNGDAIHN
        FP+VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGEN SSEFVAIGVVDRNG+ + N
Subjt:  FPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVDRNGDAIHN

A0A5A7U133 E3 ubiquitin-protein ligase ATL64.2e-2342.68Show/hide
Query:  HSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFPV
        H L L + L+L  F +++   Q    P      Y +LS  + V I++L+   F + FFSVYIRH                                TFP 
Subjt:  HSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFPV

Query:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
        + +S +KE K+GK +LECAVCL EF+  ETLRL+PKC HVFHP CIDAWLAS +TCP+CRANL+
Subjt:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

A0A6J1BTV2 E3 ubiquitin-protein ligase ATL6-like4.5e-2540.93Show/hide
Query:  TPNCHSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLK----LSRPITVAILLLLFIFFIILFFSVYIRHFW--------------------------
        TP    L LL++L    +          Q   ++   YLK    LSRP+ V I++L+ IFFI++F SVY+RH+                           
Subjt:  TPNCHSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLK----LSRPITVAILLLLFIFFIILFFSVYIRHFW--------------------------

Query:  ------TFPVVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD
              TFPVV +   SA+K+       +ECAVCLAEFQH+ETLRL+PKCGHVFHP CIDAWL  CATCP+CRA L +G +S  +  A    D
Subjt:  ------TFPVVAH---SAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVD

Q84KA9 RING/c3HC4/PHD zinc finger-like protein4.2e-2342.68Show/hide
Query:  HSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFPV
        H L L + L+L  F +++   Q    P      Y +LS  + V I++L+   F + FFSVYIRH                                TFP 
Subjt:  HSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH------------------------------FWTFPV

Query:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
        + +S +KE K+GK +LECAVCL EF+  ETLRL+PKC HVFHP CIDAWLAS +TCP+CRANL+
Subjt:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

SwissProt top hitse value%identityAlignment
Q84W40 RING-H2 finger protein ATL112.3e-1835.53Show/hide
Query:  LSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF-----------------W-----------------TF
        L  L++L  H  F   +  QA    S       +    + + +++L+ +FF + FFSVYIR                   W                 TF
Subjt:  LSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF-----------------W-----------------TF

Query:  PVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI-GVV------DRNGDAIHN
        P   +S +K +++GK +LEC+VCL EF+  ETLRL+PKC HVFHP CIDAWL S  TCP+CRA+L      S   + I G+V      D NGD I +
Subjt:  PVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI-GVV------DRNGDAIHN

Q8LGA5 E3 ubiquitin-protein ligase ATL314.2e-2038.41Show/hide
Query:  LIILILHPFFTLTLTVQAQQSPSQSHLHYL---KLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPV
        L +L+L  F  L+++     +P Q H  Y     LS  + V +++++   F + FF+VYIRH                                  TFP 
Subjt:  LIILILHPFFTLTLTVQAQQSPSQSHLHYL---KLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPV

Query:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
          +S +K  K+GK +LECA+CL EF+  ETLRLLPKC HVFHP CI AWL    TCP+CR NLA
Subjt:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

Q8RXX9 E3 ubiquitin-protein ligase ATL66.9e-2341.38Show/hide
Query:  QAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPVVAHSAIKEMKMGKWSLECA
        Q+Q  P+    +Y +LS  + V +++L+   F + FFS+Y RH                                  TFP   +S +K  K+GK  LECA
Subjt:  QAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPVVAHSAIKEMKMGKWSLECA

Query:  VCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
        +CL EF+  ETLRLLPKC HVFHP CIDAWL +  TCP+CRANLA
Subjt:  VCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

Q8W571 RING-H2 finger protein ATL328.8e-1837.35Show/hide
Query:  LILHPFFTLTLTVQAQQ-SPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAHSAI
        +ILH    +     AQ  SPS   L         TV   +L+ +FF+    SVYIRH                                 +FPV A+S++
Subjt:  LILHPFFTLTLTVQAQQ-SPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAHSAI

Query:  KEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSE
        KE K+G   LECA+CL E + +ET+RLLP C H+FH  CID WL S ATCP+CR+NL A  N   +
Subjt:  KEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSE

Q9SK92 E3 ubiquitin-protein ligase ATL158.5e-2160.26Show/hide
Query:  TFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANL--AAGENSSSE
        TFP   +S +K +++GK +LEC VCL EF+  ETLRL+P+C HVFHP CIDAWL S  TCP+CRANL    GE+ SSE
Subjt:  TFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANL--AAGENSSSE

Arabidopsis top hitse value%identityAlignment
AT1G22500.1 RING/U-box superfamily protein6.0e-2260.26Show/hide
Query:  TFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANL--AAGENSSSE
        TFP   +S +K +++GK +LEC VCL EF+  ETLRL+P+C HVFHP CIDAWL S  TCP+CRANL    GE+ SSE
Subjt:  TFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANL--AAGENSSSE

AT1G72200.1 RING/U-box superfamily protein1.6e-1935.53Show/hide
Query:  LSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF-----------------W-----------------TF
        L  L++L  H  F   +  QA    S       +    + + +++L+ +FF + FFSVYIR                   W                 TF
Subjt:  LSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHF-----------------W-----------------TF

Query:  PVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI-GVV------DRNGDAIHN
        P   +S +K +++GK +LEC+VCL EF+  ETLRL+PKC HVFHP CIDAWL S  TCP+CRA+L      S   + I G+V      D NGD I +
Subjt:  PVVAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAI-GVV------DRNGDAIHN

AT3G05200.1 RING/U-box superfamily protein4.9e-2441.38Show/hide
Query:  QAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPVVAHSAIKEMKMGKWSLECA
        Q+Q  P+    +Y +LS  + V +++L+   F + FFS+Y RH                                  TFP   +S +K  K+GK  LECA
Subjt:  QAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPVVAHSAIKEMKMGKWSLECA

Query:  VCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
        +CL EF+  ETLRLLPKC HVFHP CIDAWL +  TCP+CRANLA
Subjt:  VCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA

AT4G40070.1 RING/U-box superfamily protein6.2e-1937.35Show/hide
Query:  LILHPFFTLTLTVQAQQ-SPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAHSAI
        +ILH    +     AQ  SPS   L         TV   +L+ +FF+    SVYIRH                                 +FPV A+S++
Subjt:  LILHPFFTLTLTVQAQQ-SPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRH-------------------------------FWTFPVVAHSAI

Query:  KEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSE
        KE K+G   LECA+CL E + +ET+RLLP C H+FH  CID WL S ATCP+CR+NL A  N   +
Subjt:  KEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSE

AT5G27420.1 carbon/nitrogen insensitive 13.0e-2138.41Show/hide
Query:  LIILILHPFFTLTLTVQAQQSPSQSHLHYL---KLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPV
        L +L+L  F  L+++     +P Q H  Y     LS  + V +++++   F + FF+VYIRH                                  TFP 
Subjt:  LIILILHPFFTLTLTVQAQQSPSQSHLHYL---KLSRPITVAILLLLFIFFIILFFSVYIRH--------------------------------FWTFPV

Query:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA
          +S +K  K+GK +LECA+CL EF+  ETLRLLPKC HVFHP CI AWL    TCP+CR NLA
Subjt:  VAHSAIKEMKMGKWSLECAVCLAEFQHYETLRLLPKCGHVFHPPCIDAWLASCATCPICRANLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCCCTTTTAGTTTTACTCCCAATTGTCACTCTCTTTCTTTACTAATAATTCTGATCTTACACCCATTCTTCACCCTCACCCTCACCGTCCAAGCCCAACAATC
CCCCTCCCAGTCCCACCTTCACTATTTGAAATTAAGCCGCCCCATAACCGTAGCCATTCTCCTTCTTCTCTTCATTTTCTTCATCATCCTCTTTTTCTCCGTTTACATCC
GCCACTTTTGGACGTTTCCTGTGGTGGCCCACTCCGCAATAAAGGAAATGAAAATGGGGAAGTGGTCCTTGGAATGTGCCGTTTGCTTGGCTGAATTCCAACACTACGAA
ACGCTGCGTTTGTTGCCTAAATGTGGTCACGTTTTTCATCCCCCTTGCATCGACGCTTGGCTGGCCTCTTGCGCCACCTGCCCCATTTGCAGGGCTAACCTCGCCGCCGG
GGAAAATTCCTCGTCCGAATTCGTCGCCATCGGTGTTGTTGATCGTAATGGGGATGCGATACATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCCCTTTTAGTTTTACTCCCAATTGTCACTCTCTTTCTTTACTAATAATTCTGATCTTACACCCATTCTTCACCCTCACCCTCACCGTCCAAGCCCAACAATC
CCCCTCCCAGTCCCACCTTCACTATTTGAAATTAAGCCGCCCCATAACCGTAGCCATTCTCCTTCTTCTCTTCATTTTCTTCATCATCCTCTTTTTCTCCGTTTACATCC
GCCACTTTTGGACGTTTCCTGTGGTGGCCCACTCCGCAATAAAGGAAATGAAAATGGGGAAGTGGTCCTTGGAATGTGCCGTTTGCTTGGCTGAATTCCAACACTACGAA
ACGCTGCGTTTGTTGCCTAAATGTGGTCACGTTTTTCATCCCCCTTGCATCGACGCTTGGCTGGCCTCTTGCGCCACCTGCCCCATTTGCAGGGCTAACCTCGCCGCCGG
GGAAAATTCCTCGTCCGAATTCGTCGCCATCGGTGTTGTTGATCGTAATGGGGATGCGATACATAACTGA
Protein sequenceShow/hide protein sequence
MKLPFSFTPNCHSLSLLIILILHPFFTLTLTVQAQQSPSQSHLHYLKLSRPITVAILLLLFIFFIILFFSVYIRHFWTFPVVAHSAIKEMKMGKWSLECAVCLAEFQHYE
TLRLLPKCGHVFHPPCIDAWLASCATCPICRANLAAGENSSSEFVAIGVVDRNGDAIHN