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PI0019633 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019633
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGypsy-like retrotransposase
Genome locationchr06:10613726..10614289
RNA-Seq ExpressionPI0019633
SyntenyPI0019633
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032810.1 uncharacterized protein E6C27_scaffold708G00640 [Cucumis melo var. makuwa]1.1e-5368.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ LI REDN QLKS  S  +EP + TGT +S K E S STTKS IL DEK SNPP+L YVP SRRKKGE  FVE P+GLKV D+E+LKESF+TPL+KIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR TKDEFDPKAYKLMAKA Y F T T+F++ KI+EQ +LS TQKKLLREGHV P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

KAA0033081.1 gypsy-like retrotransposase [Cucumis melo var. makuwa]5.3e-5367.05Show/hide
Query:  MPAEISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLT
        M  EIS + REDN QLKS  S  KEP + TGT NS KGE S  TTKS IL DEK SNPP+LCYV  SRRKKGE  FVE P+GLKVGD++ILKESF+TPLT
Subjt:  MPAEISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLT

Query:  KITKQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KITKQEIK+ + EA+LPQ QTKD FDPKAYKLMAKA YDFT   +F++ + +EQ +LS  QKKLLREGH  P  +K
Subjt:  KITKQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

KAA0051585.1 uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa]1.3e-5468.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP +  GT +S K E S +T KS IL DEK SNPP+L YVP SRRKKGE  FVE P+GLKVG++E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR+TKD FDPKAYKLMAKA YDFTT T+F++ KIYEQ +LS TQKKLLREGHV P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

KAA0062018.1 uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]2.5e-5568.21Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP +  GT +S K E S ST KS IL DEK SNPP+LCYVP SRRKKGE  FVE  +GLKVGD+E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LP+R+TKDEFDPKAYKLMAKA YDFTT T+F++ KI+EQ ++S TQKKLLREGH  P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.6e-5468.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP    GT +S K E S ST KS IL DEK SNP +L YVP SRRKKGE  FVE P+GLKVGD+E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR+TKDEFDPKAYKLMAKA YDFTT T+F++ KI+EQ +LS TQKKLLREGH  P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

TrEMBL top hitse value%identityAlignment
A0A5A7SU72 Gypsy-like retrotransposase2.5e-5367.05Show/hide
Query:  MPAEISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLT
        M  EIS + REDN QLKS  S  KEP + TGT NS KGE S  TTKS IL DEK SNPP+LCYV  SRRKKGE  FVE P+GLKVGD++ILKESF+TPLT
Subjt:  MPAEISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLT

Query:  KITKQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KITKQEIK+ + EA+LPQ QTKD FDPKAYKLMAKA YDFT   +F++ + +EQ +LS  QKKLLREGH  P  +K
Subjt:  KITKQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

A0A5A7UD46 Uncharacterized protein6.1e-5568.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP +  GT +S K E S +T KS IL DEK SNPP+L YVP SRRKKGE  FVE P+GLKVG++E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR+TKD FDPKAYKLMAKA YDFTT T+F++ KIYEQ +LS TQKKLLREGHV P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

A0A5A7V356 Uncharacterized protein1.2e-5568.21Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP +  GT +S K E S ST KS IL DEK SNPP+LCYVP SRRKKGE  FVE  +GLKVGD+E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LP+R+TKDEFDPKAYKLMAKA YDFTT T+F++ KI+EQ ++S TQKKLLREGH  P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.8e-5468.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ L+ REDN QLKS  S  KEP    GT +S K E S ST KS IL DEK SNP +L YVP SRRKKGE  FVE P+GLKVGD+E+LKESF+TPLTKIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR+TKDEFDPKAYKLMAKA YDFTT T+F++ KI+EQ +LS TQKKLLREGH  P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

A0A5D3E3J4 Uncharacterized protein5.1e-5468.79Show/hide
Query:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT
        E+ LI REDN QLKS  S  +EP + TGT +S K E S STTKS IL DEK SNPP+L YVP SRRKKGE  FVE P+GLKV D+E+LKESF+TPL+KIT
Subjt:  EISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKIT

Query:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK
        KQEIK+++TEA+LPQR TKDEFDPKAYKLMAKA Y F T T+F++ KI+EQ +LS TQKKLLREGHV P   K
Subjt:  KQEIKLNMTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCAGAAATTTCACTGATAAAAAGAGAAGATAATCCACAGTTGAAGTCACCTACAAGCATAAGAAAAGAACCACGTGAAGGAACAGGTACCTCTAACTCTAGAAA
GGGTGAGCCATCCATTAGCACCACAAAGAGCACGATCTTAAAAGATGAAAAGGCTTCAAACCCTCCAGTCTTGTGCTATGTCCCTCAATCGAGGCGTAAGAAAGGTGAGT
TATTGTTCGTGGAGTGCCCAAAAGGCTTGAAGGTTGGTGATGTCGAAATCTTAAAAGAAAGCTTCTCTACACCGTTGACTAAGATAACGAAGCAAGAGATAAAGTTAAAC
ATGACAGAAGCAAACTTGCCTCAAAGGCAGACGAAAGACGAGTTTGACCCCAAGGCTTACAAATTGATGGCGAAAGCATGTTATGACTTCACAACTCGCACTAAGTTCGA
AAACTGGAAAATTTATGAACAATCCGAGCTTTCCTTAACCCAAAAGAAGCTCTTACGGGAAGGACATGTATACCCGTGTCAAGAAAAGGACTCGGATACAAATCATCAGA
ACCGATGCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCAGAAATTTCACTGATAAAAAGAGAAGATAATCCACAGTTGAAGTCACCTACAAGCATAAGAAAAGAACCACGTGAAGGAACAGGTACCTCTAACTCTAGAAA
GGGTGAGCCATCCATTAGCACCACAAAGAGCACGATCTTAAAAGATGAAAAGGCTTCAAACCCTCCAGTCTTGTGCTATGTCCCTCAATCGAGGCGTAAGAAAGGTGAGT
TATTGTTCGTGGAGTGCCCAAAAGGCTTGAAGGTTGGTGATGTCGAAATCTTAAAAGAAAGCTTCTCTACACCGTTGACTAAGATAACGAAGCAAGAGATAAAGTTAAAC
ATGACAGAAGCAAACTTGCCTCAAAGGCAGACGAAAGACGAGTTTGACCCCAAGGCTTACAAATTGATGGCGAAAGCATGTTATGACTTCACAACTCGCACTAAGTTCGA
AAACTGGAAAATTTATGAACAATCCGAGCTTTCCTTAACCCAAAAGAAGCTCTTACGGGAAGGACATGTATACCCGTGTCAAGAAAAGGACTCGGATACAAATCATCAGA
ACCGATGCATATAA
Protein sequenceShow/hide protein sequence
MPAEISLIKREDNPQLKSPTSIRKEPREGTGTSNSRKGEPSISTTKSTILKDEKASNPPVLCYVPQSRRKKGELLFVECPKGLKVGDVEILKESFSTPLTKITKQEIKLN
MTEANLPQRQTKDEFDPKAYKLMAKACYDFTTRTKFENWKIYEQSELSLTQKKLLREGHVYPCQEKDSDTNHQNRCI