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PI0019652 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019652
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr12:19876477..19877834
RNA-Seq ExpressionPI0019652
SyntenyPI0019652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-4849.19Show/hide
Query:  LVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEA-ELDEVYHNVE
        LV+RW + RRF   G  I+ FD DVTQEYINWY NI++LYI +  AA+ HLVL I N NE+YME +HYMYDVPIVP PV + R  V+E  +L+EV  + E
Subjt:  LVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEA-ELDEVYHNVE

Query:  EVPPMTRTQSQTGYA--------------------------------AGPSSS-----YMDAGL--STSYMHGHGRGRGKHNEYLYYEAPAEVSDPQK--
        EVPPMT+TQS+  Y                                 AG SS+     Y D G   S+SYMHGHGRGRG+HNEYLYYE PA V +     
Subjt:  EVPPMTRTQSQTGYA--------------------------------AGPSSS-----YMDAGL--STSYMHGHGRGRGKHNEYLYYEAPAEVSDPQK--

Query:  -------------YQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
                      QQ+ +NQ+E +  R+QSRRRQP RNRRRPGCGTH
Subjt:  -------------YQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-6162.04Show/hide
Query:  IQLFDRDVTQEYINWYNNITRLYIIRSDAAL------------DHL--VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPP
        IQ FD+DVTQEYI+WY+NITRLYI R  AA+            D L   L I N+NERYMEE+H MYD+PIVPPPVH+G  RVEEAELD+VYHNVEEVP 
Subjt:  IQLFDRDVTQEYINWYNNITRLYIIRSDAAL------------DHL--VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPP

Query:  MTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSR
         T+TQSQTGY +                          GPSSSY+D   STSYMHGH RG G+HNEYLY+EAPA+VSD Q+YQQEP+NQ+++E HR+QSR
Subjt:  MTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSR

Query:  RRQPTRNRRRPGCGTH
        RRQPTRNRRRPGCGTH
Subjt:  RRQPTRNRRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.5e-5158.59Show/hide
Query:  RDVTQEYIN-WYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA------
        +DV    +N W +N  RL  +  D       L I N+NERYMEE+H MYD+PIVPPPVH+G  RVEEAELD+VYHNVEEVP  T+TQSQTGY +      
Subjt:  RDVTQEYIN-WYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA------

Query:  --------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
                            GPSSSY+D   STSYMHGH RG G+HNEYLY+EAPA+VSD Q+YQQEP+NQ+++E HR+QSRRRQPTRNRR PGCGTH
Subjt:  --------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.1e-5375.35Show/hide
Query:  VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAAGPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPA
        VL I N+NERYMEE+H +YD+PIVPPP+H+GR RVEEAELDEVYH V+EV PMT+TQSQTGY  GPSSSYMD   STSYMHGH RG  +HNEYLY+EAPA
Subjt:  VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAAGPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPA

Query:  EVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
        +VSD Q+YQQEP+NQ+++E HR+QSRRRQP +NRRRPGCGTH
Subjt:  EVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.2e-6257.32Show/hide
Query:  QGRTLVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHL----------------VLYISNSNERYMEELHYMYDVPIVPPPVH
        +G T     +S RRF+ +   IQ FD DVTQEYI+ YNNITRLYI R  A + HL                VL I N+NERYME++H +YD+PIVPPPVH
Subjt:  QGRTLVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHL----------------VLYISNSNERYMEELHYMYDVPIVPPPVH

Query:  KGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVS
        + R RVEEAELDEVYHNVEEVPP T+TQSQTGY +                          GP SSYMD G STSYM+GHGRG G+HNEYLY+EAP +VS
Subjt:  KGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVS

Query:  DPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
        D Q+YQQEPKNQ+++E HR+QSRRRQP RNR+  GCGTH
Subjt:  DPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein5.8e-4949.19Show/hide
Query:  LVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEA-ELDEVYHNVE
        LV+RW + RRF   G  I+ FD DVTQEYINWY NI++LYI +  AA+ HLVL I N NE+YME +HYMYDVPIVP PV + R  V+E  +L+EV  + E
Subjt:  LVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEA-ELDEVYHNVE

Query:  EVPPMTRTQSQTGYA--------------------------------AGPSSS-----YMDAGL--STSYMHGHGRGRGKHNEYLYYEAPAEVSDPQK--
        EVPPMT+TQS+  Y                                 AG SS+     Y D G   S+SYMHGHGRGRG+HNEYLYYE PA V +     
Subjt:  EVPPMTRTQSQTGYA--------------------------------AGPSSS-----YMDAGL--STSYMHGHGRGRGKHNEYLYYEAPAEVSDPQK--

Query:  -------------YQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
                      QQ+ +NQ+E +  R+QSRRRQP RNRRRPGCGTH
Subjt:  -------------YQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.0e-6262.04Show/hide
Query:  IQLFDRDVTQEYINWYNNITRLYIIRSDAAL------------DHL--VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPP
        IQ FD+DVTQEYI+WY+NITRLYI R  AA+            D L   L I N+NERYMEE+H MYD+PIVPPPVH+G  RVEEAELD+VYHNVEEVP 
Subjt:  IQLFDRDVTQEYINWYNNITRLYIIRSDAAL------------DHL--VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPP

Query:  MTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSR
         T+TQSQTGY +                          GPSSSY+D   STSYMHGH RG G+HNEYLY+EAPA+VSD Q+YQQEP+NQ+++E HR+QSR
Subjt:  MTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSR

Query:  RRQPTRNRRRPGCGTH
        RRQPTRNRRRPGCGTH
Subjt:  RRQPTRNRRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X23.6e-5158.59Show/hide
Query:  RDVTQEYIN-WYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA------
        +DV    +N W +N  RL  +  D       L I N+NERYMEE+H MYD+PIVPPPVH+G  RVEEAELD+VYHNVEEVP  T+TQSQTGY +      
Subjt:  RDVTQEYIN-WYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA------

Query:  --------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
                            GPSSSY+D   STSYMHGH RG G+HNEYLY+EAPA+VSD Q+YQQEP+NQ+++E HR+QSRRRQPTRNRR PGCGTH
Subjt:  --------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X21.0e-5375.35Show/hide
Query:  VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAAGPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPA
        VL I N+NERYMEE+H +YD+PIVPPP+H+GR RVEEAELDEVYH V+EV PMT+TQSQTGY  GPSSSYMD   STSYMHGH RG  +HNEYLY+EAPA
Subjt:  VLYISNSNERYMEELHYMYDVPIVPPPVHKGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAAGPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPA

Query:  EVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
        +VSD Q+YQQEP+NQ+++E HR+QSRRRQP +NRRRPGCGTH
Subjt:  EVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.6e-6257.32Show/hide
Query:  QGRTLVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHL----------------VLYISNSNERYMEELHYMYDVPIVPPPVH
        +G T     +S RRF+ +   IQ FD DVTQEYI+ YNNITRLYI R  A + HL                VL I N+NERYME++H +YD+PIVPPPVH
Subjt:  QGRTLVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHL----------------VLYISNSNERYMEELHYMYDVPIVPPPVH

Query:  KGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVS
        + R RVEEAELDEVYHNVEEVPP T+TQSQTGY +                          GP SSYMD G STSYM+GHGRG G+HNEYLY+EAP +VS
Subjt:  KGRARVEEAELDEVYHNVEEVPPMTRTQSQTGYAA--------------------------GPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVS

Query:  DPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH
        D Q+YQQEPKNQ+++E HR+QSRRRQP RNR+  GCGTH
Subjt:  DPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAGCTTCAACATGCCAATGATCATCTACTACCTGAACGGACATACGGTTCACGACAAGGTCGCACATTGGTAGTGCGATGGAAATCTGGTAGAAGATTTAT
TGTAGTGGGAGCTTTAATTCAGCTATTCGATAGAGACGTGACTCAAGAATACATCAACTGGTATAATAATATTACGCGACTCTACATCATTCGATCGGATGCAGCTTTGG
ATCATCTGGTTCTTTATATATCCAACAGTAATGAGAGGTATATGGAAGAGCTACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCATAAGGGACGTGCTCGA
GTGGAAGAAGCTGAACTCGATGAAGTTTATCATAATGTGGAAGAGGTGCCTCCTATGACACGGACCCAGAGCCAGACTGGTTATGCTGCTGGTCCATCTTCTTCGTACAT
GGATGCTGGTCTATCAACTTCATACATGCATGGACACGGACGAGGCCGTGGAAAACATAACGAATATCTATACTATGAAGCACCTGCAGAGGTATCAGATCCACAAAAGT
ACCAACAAGAACCAAAGAATCAAGATGAGCAAGAGCCACATAGACTTCAAAGTCGTCGACGACAACCGACTCGAAATCGACGACGTCCGGGTTGTGGGACGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAGCTTCAACATGCCAATGATCATCTACTACCTGAACGGACATACGGTTCACGACAAGGTCGCACATTGGTAGTGCGATGGAAATCTGGTAGAAGATTTAT
TGTAGTGGGAGCTTTAATTCAGCTATTCGATAGAGACGTGACTCAAGAATACATCAACTGGTATAATAATATTACGCGACTCTACATCATTCGATCGGATGCAGCTTTGG
ATCATCTGGTTCTTTATATATCCAACAGTAATGAGAGGTATATGGAAGAGCTACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCATAAGGGACGTGCTCGA
GTGGAAGAAGCTGAACTCGATGAAGTTTATCATAATGTGGAAGAGGTGCCTCCTATGACACGGACCCAGAGCCAGACTGGTTATGCTGCTGGTCCATCTTCTTCGTACAT
GGATGCTGGTCTATCAACTTCATACATGCATGGACACGGACGAGGCCGTGGAAAACATAACGAATATCTATACTATGAAGCACCTGCAGAGGTATCAGATCCACAAAAGT
ACCAACAAGAACCAAAGAATCAAGATGAGCAAGAGCCACATAGACTTCAAAGTCGTCGACGACAACCGACTCGAAATCGACGACGTCCGGGTTGTGGGACGCATTGA
Protein sequenceShow/hide protein sequence
MAPQLQHANDHLLPERTYGSRQGRTLVVRWKSGRRFIVVGALIQLFDRDVTQEYINWYNNITRLYIIRSDAALDHLVLYISNSNERYMEELHYMYDVPIVPPPVHKGRAR
VEEAELDEVYHNVEEVPPMTRTQSQTGYAAGPSSSYMDAGLSTSYMHGHGRGRGKHNEYLYYEAPAEVSDPQKYQQEPKNQDEQEPHRLQSRRRQPTRNRRRPGCGTH