; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019768 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019768
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:23388247..23388411
RNA-Seq ExpressionPI0019768
SyntenyPI0019768
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033880.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.0e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+VTT G+DIHYIET + W+QWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0046849.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1371.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ TT  +DIHYI+TS+ WSQWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-1369.81Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ TT  +DIHYIETS+ WSQWRD+LAE+MF+DWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1371.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ TT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.0e-1371.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ TT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

TrEMBL top hitse value%identityAlignment
A0A5A7U033 Retrotransposon protein9.7e-1471.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ TT  +DIHYI+TS+ WSQWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5A7VJX3 Retrotransposon protein9.7e-1471.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ TT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5D3BCB2 Retrotransposon protein1.3e-1367.92Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+PDD+DE  S++ TT G+DIHY+ETS+ WS+WRDEL ++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5D3BL48 Putative nuclease HARBI19.7e-1471.7Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ TT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5D3BQ11 Putative nuclease HARBI12.0e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+VTT G+DIHYIET + W+QWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGTCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGTCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCTGTAA
Protein sequenceShow/hide protein sequence
MTNNDVPDDVDEGDSTYVTTGGEDIHYIETSSAWSQWRDELAEKMFSDWELRNL