; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019782 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019782
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:19024347..19024511
RNA-Seq ExpressionPI0019782
SyntenyPI0019782
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052247.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE  ST+ TT D+DIHYIETSNEW+QWRD+L E MFS+WELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

KAA0053146.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.4e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE DST+ATT  +DI+YIET+NEW QW+DELAE MFSDWELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1477.78Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI D++DE DST+ATTT +DIHYIETSNEW+QWRD+LAE MFSDWEL NQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-1477.78Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI D++DE DST+ATTT +DIHYIETSNEW+QWRD+LAE MFSDWEL NQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

TYK01811.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE  ST+ TT D+DIHYIETSNEW+QWRD+L E MFS+WELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

TrEMBL top hitse value%identityAlignment
A0A5A7UCP5 Putative nuclease HARBI11.5e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE  ST+ TT D+DIHYIETSNEW+QWRD+L E MFS+WELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

A0A5A7UFY9 Putative nuclease HARBI11.1e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE DST+ATT  +DI+YIET+NEW QW+DELAE MFSDWELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

A0A5A7VJX3 Retrotransposon protein6.7e-1577.78Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI D++DE DST+ATTT +DIHYIETSNEW+QWRD+LAE MFSDWEL NQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

A0A5D3BL48 Putative nuclease HARBI16.7e-1577.78Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI D++DE DST+ATTT +DIHYIETSNEW+QWRD+LAE MFSDWEL NQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

A0A5D3BPW4 Putative nuclease HARBI11.5e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ
        MTN DI DD+DE  ST+ TT D+DIHYIETSNEW+QWRD+L E MFS+WELHNQ
Subjt:  MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACATACCAGATGATGTAGATGAGGGTGACTCTACATACGCGACCACTACCGATGAAGATATTCATTACATAGAGACCTCGAATGAATGGAATCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCATAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACATACCAGATGATGTAGATGAGGGTGACTCTACATACGCGACCACTACCGATGAAGATATTCATTACATAGAGACCTCGAATGAATGGAATCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTGCATAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDIPDDVDEGDSTYATTTDEDIHYIETSNEWNQWRDELAERMFSDWELHNQ