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PI0019808 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019808
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:13374979..13375554
RNA-Seq ExpressionPI0019808
SyntenyPI0019808
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.7e-3366.97Show/hide
Query:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPE
        +NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNP IAYP F +N RFEIK  MLQ+IQNAGQF RH  +DPH++IR+FYSICASFHMPGIS E
Subjt:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPE

Query:  ELRFALFPL
        ELRF  F L
Subjt:  ELRFALFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.2e-4647.14Show/hide
Query:  MSDSEQP-FELDPEIERTFRGNWRRARQRQIRR-MENNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYATPNLYNFNPEIAYPIF
        MS+ + P F++DPEIERTFR   R+ +QR+  + +E N +A       PQA    NA              +AHD +RP+R YA+PNLYNF P I  P F
Subjt:  MSDSEQP-FELDPEIERTFRGNWRRARQRQIRR-MENNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYATPNLYNFNPEIAYPIF

Query:  GKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENA
          N RFE+KP MLQM+Q AGQFG  +GEDPH H++SF  IC++F M G+  + +R  LFP +LRDEA +WA   E GE+ TW +++EKFM+K+FPP  +A
Subjt:  GKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENA

Query:  RRRKELMSFQ
        +RR+++++F+
Subjt:  RRRKELMSFQ

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]3.6e-3344.85Show/hide
Query:  MSDSEQPFEL---DPEIERTFRGNWRRARQRQIRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMI
        M++ E+  EL   DPEIERTFR   RR  Q+  +R              E N   +A D  R IR YA P     NP I  P   +   FE+KP M QM+
Subjt:  MSDSEQPFEL---DPEIERTFRGNWRRARQRQIRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMI

Query:  QNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
        Q  GQFG    EDPH HIRSF  +  SF + G+S E LR  LFP +LRD A  W N L    V  W+ L EKF++K+FPP  NA+ R E+MSFQ
Subjt:  QNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

XP_038880527.1 uncharacterized protein LOC120072192 [Benincasa hispida]5.0e-3551.08Show/hide
Query:  IAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWA
        +A++  RP+R YA+P LY+F+P I YP+     RFE+K  MLQM+Q A QFG   GEDPH H++ F   C  F +P I+PE++R +LFP +LRD+A +W 
Subjt:  IAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWA

Query:  NVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
        + LE  E+ TW++L+EKFM+K+FPP  NARRR+E+M+F+
Subjt:  NVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.8e-4147.94Show/hide
Query:  SEQPFELDPEIERTF--RGNWRRARQRQIRRMENNRNAPPPQAD----PEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMI
        ++  FE +PEI+ TF  R +  RA +R+I   +NN N  P        P  +  ++A D + PIR+YA PNLY+F+P I+ PI  +NARFEIKP M+QMI
Subjt:  SEQPFELDPEIERTF--RGNWRRARQRQIRRMENNRNAPPPQAD----PEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMI

Query:  QNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
        QN  QF     E+PH H+  F  +C++F +PGI+P  +R  LFP TLRD+A RWA+ LE  E+ + DQL+E FMKKFFPP  N RRRK +++F+
Subjt:  QNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

TrEMBL top hitse value%identityAlignment
A0A392NID4 Retrotrans_gag domain-containing protein (Fragment)8.4e-2839Show/hide
Query:  FELDPEIERTFRGNWRRARQRQ---IRRMENNRNAPPPQAD--------PEPNAAYIAHDLDRPIRSYAT--PNLYN---FNPEIAYPIFGKNARFEIKP
        +  DPEIERTFR   R  R+     +   E   ++    AD         EP+   IA+D  R IR YA   PN  N     PEI        A+FE KP
Subjt:  FELDPEIERTFRGNWRRARQRQ---IRRMENNRNAPPPQAD--------PEPNAAYIAHDLDRPIRSYAT--PNLYN---FNPEIAYPIFGKNARFEIKP

Query:  FMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
         M QM+Q  GQF R + EDPH H++ F  + ++F +PGI+ +  R  LFP +LRD    W N LE   +  W+ L EKF+ K+FPP +NA+ R ++ SF+
Subjt:  FMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

A0A5A7UDN8 Uncharacterized protein4.2e-2764.95Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNP IAY  FG+N  FEIK  ML M QNAGQFG H  EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.3e-3366.97Show/hide
Query:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPE
        +NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNP IAYP F +N RFEIK  MLQ+IQNAGQF RH  +DPH++IR+FYSICASFHMPGIS E
Subjt:  ENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPE

Query:  ELRFALFPL
        ELRF  F L
Subjt:  ELRFALFPL

A0A6J1DY39 uncharacterized protein LOC1110256532.1e-2640.28Show/hide
Query:  PNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDE
        PN  ++A   DR +R YA   L + N  +    F  +A+FE KP MLQM+ N GQFG    EDP  H++SF  +  +F +PGIS + LR  LFP ++  +
Subjt:  PNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDE

Query:  ANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
        A  W N      + TW  +++KF+ K+FPP  NA  R+E++SF+
Subjt:  ANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

U5CUI2 Retrotrans_gag domain-containing protein1.3e-2846.85Show/hide
Query:  NAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA
        N   +A D  R IR YA P     NP I  P   +  +FE+KP M QM+Q  GQF     EDPH H+RSF  +  SF + G+S E LR  LFP +LRD A
Subjt:  NAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA

Query:  NRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ
          W N L    V  W+ L EKF++K+FPP  NA+ R E+MSFQ
Subjt:  NRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACAGCGAACAGCCATTCGAACTTGACCCTGAGATTGAGCGAACATTTCGGGGTAATTGGCGAAGAGCAAGGCAAAGACAAATTCGTAGAATGGAAAATAACAG
AAATGCTCCTCCGCCGCAAGCTGACCCAGAACCCAATGCCGCCTATATCGCACATGACTTGGACAGACCAATTAGATCTTATGCGACACCCAACCTTTATAACTTCAATC
CAGAAATCGCCTACCCTATATTTGGCAAAAACGCCAGGTTTGAAATCAAACCTTTTATGCTTCAGATGATTCAAAACGCCGGACAATTTGGCAGACATTCTGGGGAAGAT
CCACACGAGCATATAAGGAGTTTCTACTCCATCTGCGCTTCTTTTCACATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGA
GGCGAATAGGTGGGCAAATGTCCTGGAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTCTTCCCACCTCATGAAAATGCAAGAAGAA
GGAAGGAGCTTATGAGCTTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACAGCGAACAGCCATTCGAACTTGACCCTGAGATTGAGCGAACATTTCGGGGTAATTGGCGAAGAGCAAGGCAAAGACAAATTCGTAGAATGGAAAATAACAG
AAATGCTCCTCCGCCGCAAGCTGACCCAGAACCCAATGCCGCCTATATCGCACATGACTTGGACAGACCAATTAGATCTTATGCGACACCCAACCTTTATAACTTCAATC
CAGAAATCGCCTACCCTATATTTGGCAAAAACGCCAGGTTTGAAATCAAACCTTTTATGCTTCAGATGATTCAAAACGCCGGACAATTTGGCAGACATTCTGGGGAAGAT
CCACACGAGCATATAAGGAGTTTCTACTCCATCTGCGCTTCTTTTCACATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGA
GGCGAATAGGTGGGCAAATGTCCTGGAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTCTTCCCACCTCATGAAAATGCAAGAAGAA
GGAAGGAGCTTATGAGCTTCCAGTAG
Protein sequenceShow/hide protein sequence
MSDSEQPFELDPEIERTFRGNWRRARQRQIRRMENNRNAPPPQADPEPNAAYIAHDLDRPIRSYATPNLYNFNPEIAYPIFGKNARFEIKPFMLQMIQNAGQFGRHSGED
PHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEANRWANVLEDGEVGTWDQLIEKFMKKFFPPHENARRRKELMSFQ