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PI0019818 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019818
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:16359687..16360247
RNA-Seq ExpressionPI0019818
SyntenyPI0019818
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.3e-2446.32Show/hide
Query:  REALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEAL
        ++ALE I WPGT W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF  + + L
Subjt:  REALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEAL

Query:  CLKALPFLSAIQTISIPGELCNQMALNRMITFHGHK
         +KA P L   Q + +   +C    L+R IT H +K
Subjt:  CLKALPFLSAIQTISIPGELCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]7.9e-2552.42Show/hide
Query:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA
        A++ +++I WP      TPT + QL+P QLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG ++    L+WMR PK A PFP+ V+ 
Subjt:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA

Query:  LCLKAL-PFLSAIQTISIPGELCN
        LCLK L      I  I + G  CN
Subjt:  LCLKAL-PFLSAIQTISIPGELCN

KAA0057652.1 hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa]2.3e-2451.43Show/hide
Query:  EALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEALC
        +AL+ +AWP T W++ PTGKYQL+   L TEA +WL F+K  I PTRHDSTI++E  ML+YCI+    VN+ E+I+  I+AW++ P+   PF  ++E LC
Subjt:  EALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEALC

Query:  LKALP
        LKA P
Subjt:  LKALP

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-2856.67Show/hide
Query:  MAREALEVIAWPGTAWEVTPTG-KYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIV
        +A+EAL+V+AWPG   EV P   +YQLYP  LTT+A+VW+FF K KIFPT +DSTI+++ T++LYCI+ KK +NL E+I   IL WM  PK AMPFPS++
Subjt:  MAREALEVIAWPGTAWEVTPTG-KYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIV

Query:  EALCLKALPFLSAIQTISIP
        E LCLK LP L      +IP
Subjt:  EALCLKALPFLSAIQTISIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]7.9e-2552.42Show/hide
Query:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA
        A++ +++I WP      TPT + QL+P QLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG ++    L+WMR PK A PFP+ V+ 
Subjt:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA

Query:  LCLKAL-PFLSAIQTISIPGELCN
        LCLK L      I  I + G  CN
Subjt:  LCLKAL-PFLSAIQTISIPGELCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase3.8e-2552.42Show/hide
Query:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA
        A++ +++I WP      TPT + QL+P QLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG ++    L+WMR PK A PFP+ V+ 
Subjt:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA

Query:  LCLKAL-PFLSAIQTISIPGELCN
        LCLK L      I  I + G  CN
Subjt:  LCLKAL-PFLSAIQTISIPGELCN

A0A5A7V6M5 Gag/pol protein9.7e-2956.67Show/hide
Query:  MAREALEVIAWPGTAWEVTPTG-KYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIV
        +A+EAL+V+AWPG   EV P   +YQLYP  LTT+A+VW+FF K KIFPT +DSTI+++ T++LYCI+ KK +NL E+I   IL WM  PK AMPFPS++
Subjt:  MAREALEVIAWPGTAWEVTPTG-KYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIV

Query:  EALCLKALPFLSAIQTISIP
        E LCLK LP L      +IP
Subjt:  EALCLKALPFLSAIQTISIP

A0A5D3CVL7 Uncharacterized protein3.8e-2552.42Show/hide
Query:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA
        A++ +++I WP      TPT + QL+P QLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG ++    L+WMR PK A PFP+ V+ 
Subjt:  AREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEA

Query:  LCLKAL-PFLSAIQTISIPGELCN
        LCLK L      I  I + G  CN
Subjt:  LCLKAL-PFLSAIQTISIPGELCN

A0A5D3CW17 Uncharacterized protein6.5e-2546.32Show/hide
Query:  REALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEAL
        ++ALE I WPGT W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    ++AW++ P GA PF  + + L
Subjt:  REALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEAL

Query:  CLKALPFLSAIQTISIPGELCNQMALNRMITFHGHK
         +KA P L   Q + +   +C    L+R IT H +K
Subjt:  CLKALPFLSAIQTISIPGELCNQMALNRMITFHGHK

A0A5D3D7L3 Uncharacterized protein1.1e-2451.43Show/hide
Query:  EALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEALC
        +AL+ +AWP T W++ PTGKYQL+   L TEA +WL F+K  I PTRHDSTI++E  ML+YCI+    VN+ E+I+  I+AW++ P+   PF  ++E LC
Subjt:  EALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEALC

Query:  LKALP
        LKA P
Subjt:  LKALP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCTTGGCCTGGGACCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTATATCCAGACCAACTAACCACTGAAGCAAGTGT
GTGGTTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAATCAACGATGCTACTTTATTGCATCCTAGCAAAGAAGCGTGTTAACC
TTGGTGAACTTATAGCCACAACCATTCTGGCATGGATGCGAGCTCCCAAAGGTGCGATGCCCTTCCCTTCAATCGTTGAGGCCCTTTGCCTTAAAGCTTTGCCATTCTTA
TCCGCCATCCAAACAATCTCAATACCTGGCGAATTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAAGAAATGGAAAGGTGGGCAAAGACATT
AGGTGACACGCCTGAAGGAATTGCCCTAGCAGAAAGAAAAAGAAATGCCCAGTCGTCGCATCAACCCCCCCACCAAAAGCAAAAAAAACAAAGGTTCTTGCGACGAAGCA
ACTTCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCGTTGGAAGTCATCGCTTGGCCTGGGACCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTATATCCAGACCAACTAACCACTGAAGCAAGTGT
GTGGTTATTCTTTATCAAGAAGAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAATCAACGATGCTACTTTATTGCATCCTAGCAAAGAAGCGTGTTAACC
TTGGTGAACTTATAGCCACAACCATTCTGGCATGGATGCGAGCTCCCAAAGGTGCGATGCCCTTCCCTTCAATCGTTGAGGCCCTTTGCCTTAAAGCTTTGCCATTCTTA
TCCGCCATCCAAACAATCTCAATACCTGGCGAATTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAAGAAATGGAAAGGTGGGCAAAGACATT
AGGTGACACGCCTGAAGGAATTGCCCTAGCAGAAAGAAAAAGAAATGCCCAGTCGTCGCATCAACCCCCCCACCAAAAGCAAAAAAAACAAAGGTTCTTGCGACGAAGCA
ACTTCCACTGA
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGTAWEVTPTGKYQLYPDQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGELIATTILAWMRAPKGAMPFPSIVEALCLKALPFL
SAIQTISIPGELCNQMALNRMITFHGHKEMERWAKTLGDTPEGIALAERKRNAQSSHQPPHQKQKKQRFLRRSNFH