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PI0019820 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019820
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein ROOT HAIR DEFECTIVE 3-like
Genome locationchr07:14922405..14923052
RNA-Seq ExpressionPI0019820
SyntenyPI0019820
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033206.1 uncharacterized protein E6C27_scaffold1276G00570 [Cucumis melo var. makuwa]4.5e-0646.07Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSG
        MQSS T E   +NELLM L+K                   ASE D  V+DVF+DI    IDDQ +D E GT+ISEDL  G + IDI  G
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSG

KAA0041004.1 hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa]4.2e-0447.89Show/hide
Query:  MQSSFTTEFLTVNELLMVLVKASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGD
        M+SSFT E   + ELLM LVK                  +IDDQ+VDDE GT ISED ED  +P+DIS G+
Subjt:  MQSSFTTEFLTVNELLMVLVKASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGD

KAA0046543.1 hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa]2.2e-0567.39Show/hide
Query:  MDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPPPSV
        MDI +  ID QHVDD+  T ISED EDG +PIDISS  EDVPPP V
Subjt:  MDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPPPSV

KAE8653658.1 hypothetical protein Csa_023635, partial [Cucumis sativus]4.8e-0852.5Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDG
        MQSSFT +   +NELLMVLVK                   ASE +NRV+DVFMD+    IDDQHVDD+  T ISEDL DG
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDG

TYK07506.1 uncharacterized protein E5676_scaffold1702G00230 [Cucumis melo var. makuwa]5.7e-0948.42Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPP
        MQSS T E   +NELLM L+K                   ASE D  V+DVF+DI    IDDQ +D E GT+ISEDL  G + IDI  G EDVPP
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPP

TrEMBL top hitse value%identityAlignment
A0A0A0M3R6 Uncharacterized protein2.3e-0852.5Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDG
        MQSSFT +   +NELLMVLVK                   ASE +NRV+DVFMD+    IDDQHVDD+  T ISEDL DG
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDG

A0A5A7ST87 Uncharacterized protein2.2e-0646.07Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSG
        MQSS T E   +NELLM L+K                   ASE D  V+DVF+DI    IDDQ +D E GT+ISEDL  G + IDI  G
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSG

A0A5A7TSM6 Uncharacterized protein1.1e-0567.39Show/hide
Query:  MDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPPPSV
        MDI +  ID QHVDD+  T ISED EDG +PIDISS  EDVPPP V
Subjt:  MDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPPPSV

A0A5D3CAX9 Uncharacterized protein2.8e-0948.42Show/hide
Query:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPP
        MQSS T E   +NELLM L+K                   ASE D  V+DVF+DI    IDDQ +D E GT+ISEDL  G + IDI  G EDVPP
Subjt:  MQSSFTTEFLTVNELLMVLVK-------------------ASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPP

A0A5D3DA67 Uncharacterized protein2.1e-0447.89Show/hide
Query:  MQSSFTTEFLTVNELLMVLVKASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGD
        M+SSFT E   + ELLM LVK                  +IDDQ+VDDE GT ISED ED  +P+DIS G+
Subjt:  MQSSFTTEFLTVNELLMVLVKASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGTCTTTTACGACCGAGTTTTTGACAGTAAATGAGCTTTTGATGGTCTTAGTCAAGGCATCAGAGGGTGACAATAGAGTGGAAGATGTCTTCATGGATATTCT
CGTTCTGGAGATTGATGACCAGCATGTTGACGATGAGGCGGGAACATTCATCAGTGAAGACCTCGAAGATGGATGCCTACCGATTGATATATCTTCAGGGGATGAGGATG
TCCCACCACCTTCTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGTCTTTTACGACCGAGTTTTTGACAGTAAATGAGCTTTTGATGGTCTTAGTCAAGGCATCAGAGGGTGACAATAGAGTGGAAGATGTCTTCATGGATATTCT
CGTTCTGGAGATTGATGACCAGCATGTTGACGATGAGGCGGGAACATTCATCAGTGAAGACCTCGAAGATGGATGCCTACCGATTGATATATCTTCAGGGGATGAGGATG
TCCCACCACCTTCTGTCTAGGTCTTGCTAGAATAAAAAGACGAGCCTATCGATGATGACATAGAGGTCCTCCCTCCACCTGATTTTACAGATGTTGTACCTAAGGAAAGA
GTGACGAGGAAGAGAGGGGTACCGTGGAAGCTGCAGAGTCTTGTCATTGAACAAGGGAAAAAGAGAATGAAGAGA
Protein sequenceShow/hide protein sequence
MQSSFTTEFLTVNELLMVLVKASEGDNRVEDVFMDILVLEIDDQHVDDEAGTFISEDLEDGCLPIDISSGDEDVPPPSV