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PI0019834 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019834
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger, CCHC-type
Genome locationchr12:14345682..14345840
RNA-Seq ExpressionPI0019834
SyntenyPI0019834
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036753.1 hypothetical protein E6C27_scaffold20G00320 [Cucumis melo var. makuwa]8.7e-1488.46Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVV EGEESE+ EGKE+IVEVGEASDGSF+EPIVGDVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

KAA0047486.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]3.6e-1282.69Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE+EEGKE+I+EV E SDGSFK+PIV D LVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

KAA0056489.1 uncharacterized protein E6C27_scaffold186G002680 [Cucumis melo var. makuwa]3.3e-1386.27Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLS
        MT QDGEVVTEG+ESE+EEGKE+IVEVGEASDGSFKEPIVGDVLVT++ LS
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLS

KAA0058988.1 Ulp1-like peptidase [Cucumis melo var. makuwa]1.6e-1286.54Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE EEGKE+IVEVGE SDGSF+E IV DVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

TYK19541.1 Ulp1-like peptidase [Cucumis melo var. makuwa]1.6e-1286.54Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE EEGKE+IVEVGE SDGSF+E IV DVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

TrEMBL top hitse value%identityAlignment
A0A5A7TZT5 Zinc finger, CCHC-type1.8e-1282.69Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE+EEGKE+I+EV E SDGSFK+PIV D LVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

A0A5A7USJ2 Uncharacterized protein1.6e-1386.27Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLS
        MT QDGEVVTEG+ESE+EEGKE+IVEVGEASDGSFKEPIVGDVLVT++ LS
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLS

A0A5A7UUV2 Ulp1-like peptidase7.9e-1386.54Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE EEGKE+IVEVGE SDGSF+E IV DVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

A0A5D3B744 Integrase catalytic domain-containing protein4.2e-1488.46Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVV EGEESE+ EGKE+IVEVGEASDGSF+EPIVGDVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

A0A5D3D7J0 Ulp1-like peptidase7.9e-1386.54Show/hide
Query:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA
        MTIQDGEVVTEGEESE EEGKE+IVEVGE SDGSF+E IV DVLVTRR LSA
Subjt:  MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATTCAAGATGGTGAGGTAGTAACTGAGGGAGAGGAAAGTGAAGATGAAGAGGGCAAAGAAAAAATTGTTGAAGTAGGAGAGGCTAGTGATGGAAGTTTCAAAGA
ACCAATAGTCGGAGATGTGTTGGTAACTAGAAGAACTTTAAGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATTCAAGATGGTGAGGTAGTAACTGAGGGAGAGGAAAGTGAAGATGAAGAGGGCAAAGAAAAAATTGTTGAAGTAGGAGAGGCTAGTGATGGAAGTTTCAAAGA
ACCAATAGTCGGAGATGTGTTGGTAACTAGAAGAACTTTAAGTGCTTAA
Protein sequenceShow/hide protein sequence
MTIQDGEVVTEGEESEDEEGKEKIVEVGEASDGSFKEPIVGDVLVTRRTLSA