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PI0019839 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019839
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:6039980..6040833
RNA-Seq ExpressionPI0019839
SyntenyPI0019839
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059654.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.8e-5477.02Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL TNK  QL+EKTSAIKE L L+ QL+ D KVIQER  +LSL +KELE RL+SIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELEIAKLQDE N  ESTPAITEEA+EAL +VR+SMEAA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]2.8e-5475.78Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI  + LTPLEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QLDEKTSAI+E L LM++L+ED  VIQERA +LSLEKKELE RLQS+N ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAI ++ELE+AKLQDE N  E TPAITEE +EALA+VR+SMEAA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]4.4e-5577.64Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QL+EKTSAIKEVL L+ QL+ D KVIQER  ELSLE+KELE RL+SIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELE+AKLQDE N  ESTPAITEEA+EALA VR+SMEAA EEF NFKW+L
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]8.2e-5475.78Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QL+EKTSAIKE L L+ QL+ D KVIQER  ELSLE+KELE RLQSIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELE+AKLQDE N  ESTPAI EEA+EALA +R+SMEA  EEF NFKW+L
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

TYK06376.1 hypothetical protein E5676_scaffold163G00680 [Cucumis melo var. makuwa]1.5e-5577.02Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD+LTPLEEYLNSYLKRVD+FNDVQSSYFAQLL T+K  QL+EKTS IKE L L++QL+EDVKVIQER  ELSLE+KEL+ RLQSIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++EL+I KLQD+ N  ESTPAITEEA+EALA + KSM+AA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7UX29 Putative mitochondrial protein1.4e-5477.02Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL TNK  QL+EKTSAIKE L L+ QL+ D KVIQER  +LSL +KELE RL+SIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELEIAKLQDE N  ESTPAITEEA+EAL +VR+SMEAA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

A0A5A7V3X5 PMD domain-containing protein1.4e-5475.78Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI  + LTPLEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QLDEKTSAI+E L LM++L+ED  VIQERA +LSLEKKELE RLQS+N ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAI ++ELE+AKLQDE N  E TPAITEE +EALA+VR+SMEAA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

A0A5A7VHW8 PMD domain-containing protein2.1e-5577.64Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QL+EKTSAIKEVL L+ QL+ D KVIQER  ELSLE+KELE RL+SIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELE+AKLQDE N  ESTPAITEEA+EALA VR+SMEAA EEF NFKW+L
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

A0A5D3BW91 Uncharacterized protein4.0e-5475.78Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD LT LEEYLNSYLKRVD+FNDVQSSY AQLL T+K  QL+EKTSAIKE L L+ QL+ D KVIQER  ELSLE+KELE RLQSIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++ELE+AKLQDE N  ESTPAI EEA+EALA +R+SMEA  EEF NFKW+L
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

A0A5D3C7S4 Uncharacterized protein7.3e-5677.02Show/hide
Query:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI
        I KI AD+LTPLEEYLNSYLKRVD+FNDVQSSYFAQLL T+K  QL+EKTS IKE L L++QL+EDVKVIQER  ELSLE+KEL+ RLQSIN ESEQLSI
Subjt:  IAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEKKELESRLQSINTESEQLSI

Query:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL
        LSCEK EAID++EL+I KLQD+ N  ESTPAITEEA+EALA + KSM+AA EEF NFKWKL
Subjt:  LSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATACCCTCACTCGCATGTCACCTACAGGAACGAGTTGGATCATTGCGTTTGTATCAAATACAAAGTGAGCCGTATCCATAGAATTGCAAAGATCCAAGCAGACAA
CTTAACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATGTACAATCTTCATATTTCGCACAACTGCTGTTGACGAATAAAACTCATC
AATTGGACGAGAAAACATCTGCCATCAAAGAAGTCTTGGCTTTGATGGACCAACTACAGGAAGATGTCAAAGTTATTCAGGAGAGGGCTACGGAGTTATCCTTGGAAAAG
AAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAGCTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTAA
GCTCCAAGACGAAGCCAATGCTTTTGAAAGCACCCCTGCTATTACCGAAGAAGCCATGGAGGCCTTGGCTATAGTTCGTAAGAGTATGGAGGCCGCACACGAAGAATTCA
TGAACTTCAAGTGGAAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATACCCTCACTCGCATGTCACCTACAGGAACGAGTTGGATCATTGCGTTTGTATCAAATACAAAGTGAGCCGTATCCATAGAATTGCAAAGATCCAAGCAGACAA
CTTAACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAGCTTCAATGATGTACAATCTTCATATTTCGCACAACTGCTGTTGACGAATAAAACTCATC
AATTGGACGAGAAAACATCTGCCATCAAAGAAGTCTTGGCTTTGATGGACCAACTACAGGAAGATGTCAAAGTTATTCAGGAGAGGGCTACGGAGTTATCCTTGGAAAAG
AAAGAACTGGAGAGCAGACTTCAGAGTATAAATACTGAGTCTGAACAGCTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTAA
GCTCCAAGACGAAGCCAATGCTTTTGAAAGCACCCCTGCTATTACCGAAGAAGCCATGGAGGCCTTGGCTATAGTTCGTAAGAGTATGGAGGCCGCACACGAAGAATTCA
TGAACTTCAAGTGGAAGCTTTGA
Protein sequenceShow/hide protein sequence
MGYPHSHVTYRNELDHCVCIKYKVSRIHRIAKIQADNLTPLEEYLNSYLKRVDSFNDVQSSYFAQLLLTNKTHQLDEKTSAIKEVLALMDQLQEDVKVIQERATELSLEK
KELESRLQSINTESEQLSILSCEKNEAIDKKELEIAKLQDEANAFESTPAITEEAMEALAIVRKSMEAAHEEFMNFKWKL