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PI0019861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:9560667..9561137
RNA-Seq ExpressionPI0019861
SyntenyPI0019861
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.5e-4876.74Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR  AAVGHLRSNN RL D+ADDP +V +I NNN+ Y+EEIH MYD+ I+PPPV+ G VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG
        VEEVPP TQT+SQTGYGS M MM  FG G
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG

KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-4170.99Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RL D+ADDP +V DI NNN  Y+EEIH MY+V I+P PV+   VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVGIL
        VEEVP  TQT+SQT YGS M MM  FGVG +
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVGIL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.2e-4576.19Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDPRVF-DIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE
        SIQQFD+DVTQEYIHWY+NITRLYITR GAAVG  RSNN RL D+ADD + F DI NNNE Y+EEIH MYD+PI+PPPV+ GCVRVEEAELD+VYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDPRVF-DIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE

Query:  VPPVTQTRSQTGYGSSMMMMTAFGVG
        VP  TQT+SQTGYGS M MM  F  G
Subjt:  VPPVTQTRSQTGYGSSMMMMTAFGVG

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.2e-4977.52Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR GAAVGHLRSNN RL D+ADDP +V +I NNN+ Y+EEIH MYD+ I+PPPV+ G VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG
        VEEVPP TQT+SQTGYGS M MM  FG G
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.2e-4574.6Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE
        SIQQFD DVTQEYIH YNNITRLYITR GA VGHLRSNN RL D+ +DP +V DI NNNE Y+E+IH +YD+PI+PPPV+    RVEEAELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE

Query:  VPPVTQTRSQTGYGSSMMMMTAFGVG
        VPP TQT+SQTGYGS M MM  FG G
Subjt:  VPPVTQTRSQTGYGSSMMMMTAFGVG

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-4876.74Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR  AAVGHLRSNN RL D+ADDP +V +I NNN+ Y+EEIH MYD+ I+PPPV+ G VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG
        VEEVPP TQT+SQTGYGS M MM  FG G
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.0e-4576.19Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDPRVF-DIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE
        SIQQFD+DVTQEYIHWY+NITRLYITR GAAVG  RSNN RL D+ADD + F DI NNNE Y+EEIH MYD+PI+PPPV+ GCVRVEEAELD+VYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDPRVF-DIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE

Query:  VPPVTQTRSQTGYGSSMMMMTAFGVG
        VP  TQT+SQTGYGS M MM  F  G
Subjt:  VPPVTQTRSQTGYGSSMMMMTAFGVG

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-4170.99Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RL D+ADDP +V DI NNN  Y+EEIH MY+V I+P PV+   VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVGIL
        VEEVP  TQT+SQT YGS M MM  FGVG +
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVGIL

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-4977.52Show/hide
Query:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN
        +G SIQQFD DVTQEYIHWYNNITRLYITR GAAVGHLRSNN RL D+ADDP +V +I NNN+ Y+EEIH MYD+ I+PPPV+ G VRVEEAELDEVYHN
Subjt:  MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHN

Query:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG
        VEEVPP TQT+SQTGYGS M MM  FG G
Subjt:  VEEVPPVTQTRSQTGYGSSMMMMTAFGVG

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.9e-4574.6Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE
        SIQQFD DVTQEYIH YNNITRLYITR GA VGHLRSNN RL D+ +DP +V DI NNNE Y+E+IH +YD+PI+PPPV+    RVEEAELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDP-RVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEE

Query:  VPPVTQTRSQTGYGSSMMMMTAFGVG
        VPP TQT+SQTGYGS M MM  FG G
Subjt:  VPPVTQTRSQTGYGSSMMMMTAFGVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTCAATTCAGCAATTTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATTACTCGATCGGGAGCAGCTGTGGGTCA
TCTGAGATCAAACAACAGAAGACTTTGTGATATTGCAGATGATCCACGAGTCTTTGATATATTTAATAATAATGAGACGTACTTGGAGGAGATACATTATATGTATGATG
TACCTATTCTACCTCCACCAGTTTACATGGGATGTGTTCGAGTAGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCAGTGACACAAACACGG
AGCCAAACTGGTTATGGTAGTTCAATGATGATGATGACAGCATTCGGAGTAGGGATATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTTCAATTCAGCAATTTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATTACTCGATCGGGAGCAGCTGTGGGTCA
TCTGAGATCAAACAACAGAAGACTTTGTGATATTGCAGATGATCCACGAGTCTTTGATATATTTAATAATAATGAGACGTACTTGGAGGAGATACATTATATGTATGATG
TACCTATTCTACCTCCACCAGTTTACATGGGATGTGTTCGAGTAGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCAGTGACACAAACACGG
AGCCAAACTGGTTATGGTAGTTCAATGATGATGATGACAGCATTCGGAGTAGGGATATTGTGA
Protein sequenceShow/hide protein sequence
MGASIQQFDQDVTQEYIHWYNNITRLYITRSGAAVGHLRSNNRRLCDIADDPRVFDIFNNNETYLEEIHYMYDVPILPPPVYMGCVRVEEAELDEVYHNVEEVPPVTQTR
SQTGYGSSMMMMTAFGVGIL