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PI0019878 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019878
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr08:16610593..16612909
RNA-Seq ExpressionPI0019878
SyntenyPI0019878
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143353.2 zinc finger protein BALDIBIS [Cucumis sativus]7.7e-4588.89Show/hide
Query:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS--SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVC
        MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQL H+H HHLL LNPNP PNPIIQNLDSS  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+C
Subjt:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS--SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVC

Query:  EYATKGFK
        E   KGF+
Subjt:  EYATKGFK

XP_008449264.1 PREDICTED: protein indeterminate-domain 9 [Cucumis melo]8.2e-4790.57Show/hide
Query:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEY
        MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYH+H H LLPLNPNP PNPIIQN+DSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE 
Subjt:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEY

Query:  ATKGFK
          KGF+
Subjt:  ATKGFK

XP_022143732.1 protein indeterminate-domain 9-like [Momordica charantia]6.4e-2363.81Show/hide
Query:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA
        MMSGIDF    + +GE         Q+SQLY       LP NPNPNPNP   N +S S L PSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE  
Subjt:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA

Query:  TKGFK
         KGF+
Subjt:  TKGFK

XP_023518386.1 protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo]2.2e-1561.73Show/hide
Query:  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        +Q+SQLYH      LP NPNPNPNP               PKKKRN PGKPDPDAEVIALSPN LMATNRF+CE   KGF+
Subjt:  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

XP_038883199.1 zinc finger protein BALDIBIS-like [Benincasa hispida]1.0e-2873.33Show/hide
Query:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA
        MMSGIDFSVSS+ IGEFG+   +QQQ+SQLY+HH    LP +PNPN     QNLD  SSLPP LPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE  
Subjt:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA

Query:  TKGFK
         KGF+
Subjt:  TKGFK

TrEMBL top hitse value%identityAlignment
A0A0A0KIB8 C2H2-type domain-containing protein3.7e-4588.89Show/hide
Query:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS--SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVC
        MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQL H+H HHLL LNPNP PNPIIQNLDSS  SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+C
Subjt:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSS--SSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVC

Query:  EYATKGFK
        E   KGF+
Subjt:  EYATKGFK

A0A1S3BM97 protein indeterminate-domain 94.0e-4790.57Show/hide
Query:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEY
        MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYH+H H LLPLNPNP PNPIIQN+DSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE 
Subjt:  MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEY

Query:  ATKGFK
          KGF+
Subjt:  ATKGFK

A0A6J1CRP6 protein indeterminate-domain 9-like3.1e-2363.81Show/hide
Query:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA
        MMSGIDF    + +GE         Q+SQLY       LP NPNPNPNP   N +S S L PSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRF+CE  
Subjt:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA

Query:  TKGFK
         KGF+
Subjt:  TKGFK

A0A6J1HDF4 protein indeterminate-domain 9-like1.1e-1561.73Show/hide
Query:  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        +Q+SQLYH      LP NPNPNPNP               PKKKRN PGKPDPDAEVIALSPN LMATNRF+CE   KGF+
Subjt:  QQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

R0HJJ2 C2H2-type domain-containing protein9.0e-1555.17Show/hide
Query:  DHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        D H H   +   Y  HQ H+ P +PNPNPN    N            K+KRNLPG PDPDAEVIALSPN+LMATNRF+CE   KGFK
Subjt:  DHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

SwissProt top hitse value%identityAlignment
Q700D2 Zinc finger protein JACKDAW4.6e-1651.43Show/hide
Query:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA
        M+ G  FS+SS+ +G F     H        HH Q  +  LNPN NPNP  +   SS+       KKKRN PG PDPDA+VIALSP TLMATNRFVCE  
Subjt:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA

Query:  TKGFK
         KGF+
Subjt:  TKGFK

Q944L3 Zinc finger protein BALDIBIS6.0e-1656.63Show/hide
Query:  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        H   +   Y  HQ H+ P NPNPNPNP   N            K+KRNLPG PDPDAEVIALSPN+LM TNRF+CE   KGFK
Subjt:  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

Q9LVQ7 Zinc finger protein ENHYDROUS4.7e-1365.45Show/hide
Query:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        + +  + +  P S+ KKKRNLPG PDPDAEVIALSP TLMATNRFVCE   KGF+
Subjt:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

Q9SCQ6 Zinc finger protein GAI-ASSOCIATED FACTOR 12.4e-1263.64Show/hide
Query:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        I +  + + LP S  KKKRNLPG PDP++EVIALSP TL+ATNRFVCE   KGF+
Subjt:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

Q9ZWA6 Zinc finger protein MAGPIE3.1e-1246.74Show/hide
Query:  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        I   G + +    T  + HHH                    D   SL P L KKKRNLPG PDP+AEVIALSP TLMATNRF+CE   KGF+
Subjt:  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

Arabidopsis top hitse value%identityAlignment
AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein2.2e-1346.74Show/hide
Query:  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        I   G + +    T  + HHH                    D   SL P L KKKRNLPG PDP+AEVIALSP TLMATNRF+CE   KGF+
Subjt:  IGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

AT3G45260.1 C2H2-like zinc finger protein4.3e-1756.63Show/hide
Query:  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        H   +   Y  HQ H+ P NPNPNPNP   N            K+KRNLPG PDPDAEVIALSPN+LM TNRF+CE   KGFK
Subjt:  HQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

AT3G50700.1 indeterminate(ID)-domain 21.7e-1363.64Show/hide
Query:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        I +  + + LP S  KKKRNLPG PDP++EVIALSP TL+ATNRFVCE   KGF+
Subjt:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK

AT5G03150.1 C2H2-like zinc finger protein3.3e-1751.43Show/hide
Query:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA
        M+ G  FS+SS+ +G F     H        HH Q  +  LNPN NPNP  +   SS+       KKKRN PG PDPDA+VIALSP TLMATNRFVCE  
Subjt:  MMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYA

Query:  TKGFK
         KGF+
Subjt:  TKGFK

AT5G66730.1 C2H2-like zinc finger protein3.4e-1465.45Show/hide
Query:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK
        + +  + +  P S+ KKKRNLPG PDPDAEVIALSP TLMATNRFVCE   KGF+
Subjt:  IQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAATTGTATTGGAGAATTTGGTGATCATCATCGTCATCAACAACAAACTTCTCAACTTTATCATCATCATCAGCA
TCATCTTCTTCCTCTTAACCCTAACCCTAATCCTAACCCTATTATTCAAAATCTTGATTCTTCTTCTTCTCTTCCTCCTTCTCTCCCCAAGAAGAAGAGAAATTTGCCAG
GAAAACCAGATCCAGATGCAGAGGTAATTGCTTTATCTCCAAACACACTAATGGCAACTAACAGATTCGTGTGTGAATATGCAACAAAGGGTTTCAAAGAGACCAAAACT
TACAACTACACAGAAGAGGACACAATTTACCATGGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTCCTTTTATTTGAGAAAGAGAGGAACAATTTTTGCAGATAAAATAAACATGAAATATTCTGTTTCAGGTCATCATAGTTTTTGGAGCTTTCTTTTTAAGCCAAA
CAAACAAACCACACCCAAAACTCATCTCTTTTTCCCTTTCTTTACTACACTCTCTCCATCTCCAAAGAAAAAACAAACTTTTCTCTTTTATATATTCATCGTCTTCTTCT
TCTTCTTCTTCTTTCTGAGGTTCCTTTTCTTCTTTGTCTTTGAGCCAAAAAAATTTCATTTTTCTGTTTGATTTATTTGGGGACTTCTCATCAAAACCATACAGAATCTT
TGAGCTGCTATTTGGTTTGAATTTGTTTTTGTGTAAGGGTTTAGGCTTTTTTTTTGGTGATGATGATGTCTGGTATTGACTTTTCTGTTTCTTCTAATTGTATTGGAGAA
TTTGGTGATCATCATCGTCATCAACAACAAACTTCTCAACTTTATCATCATCATCAGCATCATCTTCTTCCTCTTAACCCTAACCCTAATCCTAACCCTATTATTCAAAA
TCTTGATTCTTCTTCTTCTCTTCCTCCTTCTCTCCCCAAGAAGAAGAGAAATTTGCCAGGAAAACCAGATCCAGATGCAGAGGTAATTGCTTTATCTCCAAACACACTAA
TGGCAACTAACAGATTCGTGTGTGAATATGCAACAAAGGGTTTCAAAGAGACCAAAACTTACAACTACACAGAAGAGGACACAATTTACCATGGAAGCTAAGACAAAGAA
GCAACAAAGAAGCAGTAGTAGTGAAGAAGAAAGTATATTTGCCCTGAAAAATGTTGTGTTCATCACGATCCAAGCAGAGCACTTGGGGACCTAACAGGAATTAAAAAACA
TTATAGTAGAAAACATGGGGAGAAGAAATGGAAGTGTGAGAAATGTTGTAAGAAATATGCTGTTCAATCTGATGGAAAGCTCACTCTAAGACTTGTGGTACTAGAGACTA
CAAATGTGACTGTGGAACACTCTTTCAAGGTCATTTCTATTTCTTTACTCTACCTCTCTTTCTTTATTTTATTATTATAACGTTCTCCTTCGTTTTTGAGTTTGTCGTGG
TTTAGTTAACTTTTGGTCTAGCTGATATAAGACTTTGATTAATTGAACATTCTTGCTGCTTGAATACATATACTGTTGAAAAGGAAGCTTGATGTTTGTTTTGATACATA
TTATTTAATAATTATAGTACTAAATCTATTTGGATTAACTTTTTCGTTTTGAAAATTTGGGTTTGACATTGGTAATTAGATTTTAAAGTATTTTGAAGGTCAATTCAAAT
AGGTTAATGTTTTTGGTTTACATATTAATTTTAATAATAAAATATGATAATAAATAGTTTCGGG
Protein sequenceShow/hide protein sequence
MMMSGIDFSVSSNCIGEFGDHHRHQQQTSQLYHHHQHHLLPLNPNPNPNPIIQNLDSSSSLPPSLPKKKRNLPGKPDPDAEVIALSPNTLMATNRFVCEYATKGFKETKT
YNYTEEDTIYHGS