; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019880 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019880
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationchr07:4387265..4388812
RNA-Seq ExpressionPI0019880
SyntenyPI0019880
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-9866.67Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
        MAGF+PL     GGR PNYH PT TT         TT+GLFWY+NYE LE W+       QQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP

Query:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD
        V SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+MGNFP+EV++ AVFRCVRMTTLDET+D
Subjt:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD

Query:  QYAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        Q+AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+                       SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  QYAYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_004146546.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus]9.7e-14696.98Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
        MAGFFPLDGGGSGGRVPNYHFPTPTT  GGEIIHPTTEGLFWYKNYERLETWEGEEQQQ QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP

Query:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD
        VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFP EVTTPAVFRCVRMT+LDETDD
Subjt:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD

Query:  QYAYQTAVNIGGHIFKGILYDHGPEQPPPPP--SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        QYAYQTAVNIGG IFKGILYDHGPEQPPPPP  SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  QYAYQTAVNIGGHIFKGILYDHGPEQPPPPP--SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_008465489.1 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]6.5e-14295.13Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG
        MAGFFPLDGGGSGGRVPNYHFPTPTT  GGEIIHPTTEGLFWYKNYERLETWEGEE+ QQ QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGG
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG

Query:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD
        PVTSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFPMEVTTPAVFRCVRMTTLDETD
Subjt:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD

Query:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS   AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]8.6e-11077.34Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFP---TPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLDGGGS GR PNY FP   T TT GGGEIIHP T+GLFWYKNYERLETWE ++QQ      QEQGGEGFVYSGDESPARSSLVMVRSGR  GG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFP---TPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDE
        GG V SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG FP EV++ AVFRCVRMTTLDE
Subjt:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDE

Query:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        T +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S            SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Subjt:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]8.6e-11077.34Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFP---TPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLDGGGS GR PNY FP   T TT GGGEIIHP T+GLFWYKNYERLETWE ++QQ      QEQGGEGFVYSGDESPARSSLVMVRSGR  GG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFP---TPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDE
        GG V SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG FP EV++ AVFRCVRMTTLDE
Subjt:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDE

Query:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        T +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S            SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Subjt:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein4.7e-14696.98Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
        MAGFFPLDGGGSGGRVPNYHFPTPTT  GGEIIHPTTEGLFWYKNYERLETWEGEEQQQ QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP

Query:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD
        VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFP EVTTPAVFRCVRMT+LDETDD
Subjt:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD

Query:  QYAYQTAVNIGGHIFKGILYDHGPEQPPPPP--SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        QYAYQTAVNIGG IFKGILYDHGPEQPPPPP  SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  QYAYQTAVNIGGHIFKGILYDHGPEQPPPPP--SSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like3.2e-14295.13Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG
        MAGFFPLDGGGSGGRVPNYHFPTPTT  GGEIIHPTTEGLFWYKNYERLETWEGEE+ QQ QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGG
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG

Query:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD
        PVTSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFPMEVTTPAVFRCVRMTTLDETD
Subjt:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD

Query:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS   AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like3.2e-14295.13Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG
        MAGFFPLDGGGSGGRVPNYHFPTPTT  GGEIIHPTTEGLFWYKNYERLETWEGEE+ QQ QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGG
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGG

Query:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD
        PVTSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFPMEVTTPAVFRCVRMTTLDETD
Subjt:  PVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETD

Query:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS   AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  DQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSS---AALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1FUH1 protein SHORT INTERNODES-like5.3e-9766.55Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
        MAGFFPL     GGR PNYH PT TT         TT+GLFWY+NYE L  W+       QQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP

Query:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD
        V SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+M NFP+EV++ AVFRCVRMTTLDET+D
Subjt:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD

Query:  QYAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        Q+AYQTAVNIGGH FKGILYDHGPEQ    PPPPP+                       SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  QYAYQTAVNIGGHIFKGILYDHGPEQ----PPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like4.0e-9766.78Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP
        MAGFFPL     GGR PNYH PT T          TT+GLFWY+NYE L  W+       QQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGP

Query:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD
        V SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFPMEV++ AVFRCVRMTTLDET+D
Subjt:  VTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDD

Query:  QYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        Q+AYQTAVNIGGH FKGILYDHGPE   QPPPPP+                       SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  QYAYQTAVNIGGHIFKGILYDHGPE---QPPPPPS-----------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 14.7e-4239.22Show/hide
Query:  YERLETWE--GEEQQQHQQPAQEQ-----------------------GGEGF-VYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMR
        Y+  E W+     Q QHQ   Q+Q                          GF + +GD   +RS  VM+RSG GG        SCQDCGNQAKKDC HMR
Subjt:  YERLETWE--GEEQQQHQQPAQEQ-----------------------GGEGF-VYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMR

Query:  CRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPKDTHYHPTSS------------GLDMGNFPMEVTTPAVFRCVRMTTLD
        CRTCCKSRGF+C+THVKSTWVPA+KRR+R  +   L           N+ + K     P++S            GL++G FP +V T AVF+C++M++++
Subjt:  CRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPKDTHYHPTSS------------GLDMGNFPMEVTTPAVFRCVRMTTLD

Query:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQ---------------------PPPPPSSAAL-------------------LDPTPPYPTPLSTYITAGTQ
        + +DQ AYQ AV+IGGH+FKGILYD G E                           +SAA+                   LDP+  +P PLST++ AGTQ
Subjt:  ETDDQYAYQTAVNIGGHIFKGILYDHGPEQ---------------------PPPPPSSAAL-------------------LDPTPPYPTPLSTYITAGTQ

Query:  FFLPPS
        FF PPS
Subjt:  FFLPPS

O65517 Protein SHI RELATED SEQUENCE 23.5e-3752.9Show/hide
Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  MG--NFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        MG  +FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  MG--NFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

Q9LQZ5 Protein SHI RELATED SEQUENCE 58.2e-3940.66Show/hide
Query:  YKNYERLETWEGE--EQQQHQQPAQEQG---------GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR
        Y N +  E W  +  +QQ+HQQ  Q+Q            G V SG  S      +RS    V S    GG      GG   +CQDCGNQAKKDC HMRCR
Subjt:  YKNYERLETWEGE--EQQQHQQPAQEQG---------GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR

Query:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPMEVTTPA
        TCCKSRGF C+THVKSTWVPA+KRR+R  +   L           N+KR +        D   H                 ++SGL++  + P EV +PA
Subjt:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPMEVTTPA

Query:  VFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQP-------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFF
        +FRCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE                               ++  +LDP+  YP  L+++I AGT FF
Subjt:  VFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQP-------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFF

Query:  LPPSS
         PP S
Subjt:  LPPSS

Q9SD40 Protein SHI RELATED SEQUENCE 13.7e-4737.14Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIH----------PTTEGLFWYKN----------------------YERLETWEGEEQQ----QHQQPA
        MAGFF LDGGG GG            GGGG              P +E   WY+N                         LE W+   QQ    QHQQ  
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIH----------PTTEGLFWYKN----------------------YERLETWEGEEQQ----QHQQPA

Query:  Q------EQGGEG--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR
        Q         G G        F  SG+ S A     ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR
Subjt:  Q------EQGGEG--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR

Query:  DRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE
        +R  +   +  +         PK    +             P+ SGL++GNFP EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP 
Subjt:  DRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE

Query:  QP-----------------------------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
                                                             ++A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  QP-----------------------------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

Q9XGX0 Protein SHORT INTERNODES5.5e-4339.1Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---HQQPAQEQGGEGFVYSG--DESPA
        MAGFF L  GG G    N+   T      G      TE   W +N             Y+  LE W+    Q+    QQ  Q+Q  + +  +      P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---HQQPAQEQGGEGFVYSG--DESPA

Query:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G G GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP------PPPPSSAA-----
                     +SGL++GNFP EV++ AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       P  SS++     
Subjt:  -----------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP------PPPPSSAA-----

Query:  -----------LLDPTP-PYPTPLSTYITAGTQFF
                    +DP    YPTP++T++T GT FF
Subjt:  -----------LLDPTP-PYPTPLSTYITAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G75520.1 SHI-related sequence 55.9e-4040.66Show/hide
Query:  YKNYERLETWEGE--EQQQHQQPAQEQG---------GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR
        Y N +  E W  +  +QQ+HQQ  Q+Q            G V SG  S      +RS    V S    GG      GG   +CQDCGNQAKKDC HMRCR
Subjt:  YKNYERLETWEGE--EQQQHQQPAQEQG---------GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR

Query:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPMEVTTPA
        TCCKSRGF C+THVKSTWVPA+KRR+R  +   L           N+KR +        D   H                 ++SGL++  + P EV +PA
Subjt:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPMEVTTPA

Query:  VFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQP-------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFF
        +FRCVR++++  DE D  YAYQTAVNIGGHIFKGILYD GPE                               ++  +LDP+  YP  L+++I AGT FF
Subjt:  VFRCVRMTTL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQP-------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFF

Query:  LPPSS
         PP S
Subjt:  LPPSS

AT2G21400.1 SHI-related sequence34.6e-3755.83Show/hide
Query:  CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYA
        C+DCGNQAKKDCV+MRCRTCCKS+ F C+TH+KSTWVPA +R     +S  L++  PK    H T      G+FP E+++ A FRCV+++++D+  +QYA
Subjt:  CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYA

Query:  YQTAVNIGGHIFKGILYDHG
        YQT VNIGGH+F+GIL+D G
Subjt:  YQTAVNIGGHIFKGILYDHG

AT3G51060.1 Lateral root primordium (LRP) protein-related2.6e-4837.14Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIH----------PTTEGLFWYKN----------------------YERLETWEGEEQQ----QHQQPA
        MAGFF LDGGG GG            GGGG              P +E   WY+N                         LE W+   QQ    QHQQ  
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIH----------PTTEGLFWYKN----------------------YERLETWEGEEQQ----QHQQPA

Query:  Q------EQGGEG--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR
        Q         G G        F  SG+ S A     ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR
Subjt:  Q------EQGGEG--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR

Query:  DRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE
        +R  +   +  +         PK    +             P+ SGL++GNFP EV++ AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP 
Subjt:  DRHLRSDGLNSKR--------PKDTHYH-------------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPE

Query:  QP-----------------------------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
                                                             ++A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  QP-----------------------------------------------PPPPSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

AT4G36260.1 Lateral root primordium (LRP) protein-related2.5e-3852.9Show/hide
Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  MG--NFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        MG  +FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  MG--NFPMEVTTPAVFRCVRMTTLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

AT5G66350.1 Lateral root primordium (LRP) protein-related3.9e-4439.1Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---HQQPAQEQGGEGFVYSG--DESPA
        MAGFF L  GG G    N+   T      G      TE   W +N             Y+  LE W+    Q+    QQ  Q+Q  + +  +      P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---HQQPAQEQGGEGFVYSG--DESPA

Query:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G G GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP------PPPPSSAA-----
                     +SGL++GNFP EV++ AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       P  SS++     
Subjt:  -----------PTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP------PPPPSSAA-----

Query:  -----------LLDPTP-PYPTPLSTYITAGTQFF
                    +DP    YPTP++T++T GT FF
Subjt:  -----------LLDPTP-PYPTPLSTYITAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACTACAGGCGGCGGCGGCGAAATTATTCATCCGACAAC
CGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAACAGCAACAGCATCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTT
ACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGTGGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAA
GCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCTTCTAAACGCCGTGA
CCGCCACCTCCGTTCCGATGGCCTCAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGATGGAAGTGACCACAC
CGGCTGTGTTCCGGTGTGTACGAATGACAACGTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTCAAAGGCATTCTTTAC
GATCACGGCCCTGAACAACCACCTCCGCCGCCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATT
TTTTCTTCCCCCATCATCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAGAGAAAGCTAATCACAAAATGACACGTAAATAAATCACAACCGTGGGATGAAACTGATGAATTAATTAGATGAAATGGCATAATAATTAAAAAAAAAAAAAAAGA
GAGAGAGAGAGAGAGAGAAAGAGAAAGAAAGAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGACCTCAGAGAAA
GACAGAGAAGAAGAACAACCACAACAACAAAGAAGAAAGAAGTTAATTTATTTTGTTCTCTATTTAAGTTAGCACCGCCGTTTCCCATGGCGGCGTTGCAGACGACTTCG
CTTTTGCATAACAAATAAAAAATAAATAAATAAAAATTACCCTCTCCGAATCTGATTCCCAATTCTTCAACCCTTTTTTCCCTTTTTCTCAAAACTGCTTTCCGATCATC
GTTCAGAGATTGTGTTGTTTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACC
CAATTATCATTTTCCCACTCCAACTACAGGCGGCGGCGGCGAAATTATTCATCCGACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAG
GAGAAGAACAGCAACAGCATCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCG
GGGAGAGGCGGGGGTGGCGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCG
TGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCTTCTAAACGCCGTGACCGCCACCTCCGTTCCGATGGCCTCAACTCCAAACGCCCTAAAGACACCC
ACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGATGGAAGTGACCACACCGGCTGTGTTCCGGTGTGTACGAATGACAACGTTGGACGAAACCGACGAC
CAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTCAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCGCCGCCCTCCTCCGCCGCATTGCT
CGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCCCCATCATCTTAGCAATGAATAGGTGAAATTGAAATGAAAA
AAAAAATAATAATTAAGTGAGTGAAGGAATTGAAGTTTCGAGTTTGTATTAAAAGTATATAATTTTTTTTATGAATAAATTTTTAAGCTTGTAATTTTTTAAGGGAGAGT
TTGCATTAATTTGCCGCCATTGTTGGAATTTCGATG
Protein sequenceShow/hide protein sequence
MAGFFPLDGGGSGGRVPNYHFPTPTTGGGGEIIHPTTEGLFWYKNYERLETWEGEEQQQHQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQ
AKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILY
DHGPEQPPPPPSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS