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PI0019894 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019894
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr08:12627027..12627600
RNA-Seq ExpressionPI0019894
SyntenyPI0019894
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060707.1 hypothetical protein E6C27_scaffold496G00110 [Cucumis melo var. makuwa]1.9e-2677.17Show/hide
Query:  SSTILIMATSRNILPLPSTTLTNNALP-FIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSSPSPKRNNVQC
        SS   +MATSRN LPL  TTLTN+ALP FIQRSSR+LA TTT TSR SNSLK+ KG QEQTST THSTL SCKPKGPV WSSPSP RNNV+C
Subjt:  SSTILIMATSRNILPLPSTTLTNNALP-FIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSSPSPKRNNVQC

KGN54790.1 hypothetical protein Csa_012154 [Cucumis sativus]8.2e-3881.82Show/hide
Query:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS
        M LRCFPFLFIY FLFI SSSTILIMATSRN+LPLP TTLTNNALPF Q+SSRYL ATTT T   S +LK+PK  QEQTSTMTHSTLQSC PKGP+TWSS
Subjt:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS

Query:  PSPKRNNVQC
        PSPKRN VQC
Subjt:  PSPKRNNVQC

KGN54792.1 hypothetical protein Csa_012277 [Cucumis sativus]1.6e-3373.64Show/hide
Query:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS
        MT RCFPFLFIY F     SS   +MATSRNILPL  TTLTN+AL F+QRSSR+LA TTT TSRRSNSLK+ KG  EQTST THSTLQSCKPKGP+ WSS
Subjt:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS

Query:  PSPKRNNVQC
        PSP RNN++C
Subjt:  PSPKRNNVQC

TrEMBL top hitse value%identityAlignment
A0A0A0KYN0 Uncharacterized protein4.0e-3881.82Show/hide
Query:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS
        M LRCFPFLFIY FLFI SSSTILIMATSRN+LPLP TTLTNNALPF Q+SSRYL ATTT T   S +LK+PK  QEQTSTMTHSTLQSC PKGP+TWSS
Subjt:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS

Query:  PSPKRNNVQC
        PSPKRN VQC
Subjt:  PSPKRNNVQC

A0A0A0L2F6 Uncharacterized protein7.7e-3473.64Show/hide
Query:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS
        MT RCFPFLFIY F     SS   +MATSRNILPL  TTLTN+AL F+QRSSR+LA TTT TSRRSNSLK+ KG  EQTST THSTLQSCKPKGP+ WSS
Subjt:  MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSS

Query:  PSPKRNNVQC
        PSP RNN++C
Subjt:  PSPKRNNVQC

A0A5A7V1K1 Uncharacterized protein9.1e-2777.17Show/hide
Query:  SSTILIMATSRNILPLPSTTLTNNALP-FIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSSPSPKRNNVQC
        SS   +MATSRN LPL  TTLTN+ALP FIQRSSR+LA TTT TSR SNSLK+ KG QEQTST THSTL SCKPKGPV WSSPSP RNNV+C
Subjt:  SSTILIMATSRNILPLPSTTLTNNALP-FIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSSPSPKRNNVQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTAAGGTGTTTTCCTTTCCTTTTCATATACTCGTTCCTCTTCATCACGTCTTCTTCTACAATCCTCATCATGGCAACTTCAAGAAACATTCTCCCTTTACCATC
CACAACATTGACTAATAATGCATTACCATTCATTCAACGATCATCTCGATACCTAGCTGCGACCACAACTCATACTTCACGTCGCTCCAACTCTCTTAAAATACCTAAGG
GAATGCAGGAACAAACATCGACAATGACTCATTCAACCCTTCAAAGTTGCAAGCCAAAAGGACCTGTCACATGGTCTTCTCCCAGTCCAAAACGTAATAATGTGCAATGC
TAA
mRNA sequenceShow/hide mRNA sequence
TATTCCTATATATTTCAATGACTTTAAGGTGTTTTCCTTTCCTTTTCATATACTCGTTCCTCTTCATCACGTCTTCTTCTACAATCCTCATCATGGCAACTTCAAGAAAC
ATTCTCCCTTTACCATCCACAACATTGACTAATAATGCATTACCATTCATTCAACGATCATCTCGATACCTAGCTGCGACCACAACTCATACTTCACGTCGCTCCAACTC
TCTTAAAATACCTAAGGGAATGCAGGAACAAACATCGACAATGACTCATTCAACCCTTCAAAGTTGCAAGCCAAAAGGACCTGTCACATGGTCTTCTCCCAGTCCAAAAC
GTAATAATGTGCAATGCTAAAAAGCTCATTGGTAGACTCATGAGATGACTGTATTCTCGAGTTCAAATCCTCATATGACTTTGATGGTCATTCTCAACTTTCTCAAGATT
TGCACCCGACCCACTGGGTCTGTAATCCTCGAAATAATTATAGCATGTACTATTTATGATTATTCATTTTTTGGTTAGGGTTTATTACTCTCTAATACAATTAACCATTC
CTCTTCCTCTTTTTAGACAAGACT
Protein sequenceShow/hide protein sequence
MTLRCFPFLFIYSFLFITSSSTILIMATSRNILPLPSTTLTNNALPFIQRSSRYLAATTTHTSRRSNSLKIPKGMQEQTSTMTHSTLQSCKPKGPVTWSSPSPKRNNVQC