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PI0019926 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019926
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationchr09:19300185..19302201
RNA-Seq ExpressionPI0019926
SyntenyPI0019926
Gene Ontology termsGO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0103012 - ferredoxin-thioredoxin reductase activity (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142346.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus]9.9e-7697.22Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPL GSSLG SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_008458720.1 PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo]2.0e-7697.92Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPLSGSSLG SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022939771.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]8.4e-7595.83Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASS NIAVPLSGS LG+SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]4.6e-7393.75Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPLSGSS G SRH HVVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQ I+LEDI+ATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

XP_038891226.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Benincasa hispida]6.4e-7596.53Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPLSGS L  SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ8 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.8e-7697.22Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPL GSSLG SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.7e-7797.92Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPLSGSSLG SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.7e-7797.92Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MILQASS NIAVPLSGSSLG SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1FGU2 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.1e-7595.83Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASS NIAVPLSGS LG+SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

A0A6J1JZ73 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic4.1e-7595.83Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        MI QASS NIAVPLSGS LG+SRHRHVVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTPENDFAG DQAISLEDIRATTANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.8e-6479.86Show/hide
Query:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW
        M  QAS+  +AVP   +     R+  VVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFW
Subjt:  MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFW

Query:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        NCPCVPMRERKECHCMLFLTP+NDFAGN+Q I+L++I+ +TANM
Subjt:  NCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.5e-5475.37Show/hide
Query:  PLSGSSLGYSRHRHVVRAQA----EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR
        PLS ++ G  R R  VRAQA      +DKSVE+MRKFSEQYAR+S T+FC DK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMR
Subjt:  PLSGSSLGYSRHRHVVRAQA----EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMR

Query:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA
        ERKECHCMLFLTP+NDFAG DQ IS E+I+  T+
Subjt:  ERKECHCMLFLTPENDFAGNDQAISLEDIRATTA

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic5.7e-5871.94Show/hide
Query:  SSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV
        +S+  + P+S  +    R   V+RAQA+PSDKS+E+MRKFSEQ+ RKS TYFCVDK VTAVVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCV
Subjt:  SSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCV

Query:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        PMRERKECHCMLFLTP+NDFAG +Q I+L++IR  T+NM
Subjt:  PMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.2e-5774.48Show/hide
Query:  LQAS-SLNIAVPLSGSSLGYSRHRH--VVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGF
        LQAS S +     S ++L    HR   V+ ++ EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDK AE  QGF
Subjt:  LQAS-SLNIAVPLSGSSLGYSRHRH--VVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGF

Query:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        WNCPCVPMRERKECHCMLFLTPENDFAG DQ I L++IR  TANM
Subjt:  WNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.7e-5873.47Show/hide
Query:  MILQASSLN---IAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQ
        M LQA S +   ++ PL G +   S  R V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV Q
Subjt:  MILQASSLN---IAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQ

Query:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        GFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein6.9e-5973.47Show/hide
Query:  MILQASSLN---IAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQ
        M LQA S +   ++ PL G +   S  R V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV Q
Subjt:  MILQASSLN---IAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQ

Query:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM
        GFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I+ ++I+ TTANM
Subjt:  GFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTACAAGCTTCATCCCTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATATTCCCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGATAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACATTGGGCGCACCACTCTGTCCTTGCCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGG
AAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAACGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTACAAGCTTCATCCCTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATATTCCCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGATAA
GTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATC
ACAAAGATACATTGGGCGCACCACTCTGTCCTTGCCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGG
AAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAACGACTTTGCCGGCAATGATCAGGCAATCTCTTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA
Protein sequenceShow/hide protein sequence
MILQASSLNIAVPLSGSSLGYSRHRHVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRER
KECHCMLFLTPENDFAGNDQAISLEDIRATTANM