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PI0019931 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019931
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:12359096..12359731
RNA-Seq ExpressionPI0019931
SyntenyPI0019931
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

KAA0033744.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-4864.1Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCIIAEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

TYK21395.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

TrEMBL top hitse value%identityAlignment
A0A5A7SRU1 Retrotransposon protein1.3e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

A0A5A7TRV1 Retrotransposon protein1.3e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

A0A5A7VES2 Retrotransposon protein1.0e-4864.1Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCIIAEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

A0A5D3CHA0 Retrotransposon protein1.3e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

A0A5D3DCZ1 Retrotransposon protein1.3e-4863.46Show/hide
Query:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG
        M+ E++P   + ATT IDCRIKT+KR FQAI+EM+GP CSGFGWNDE KCI+AEK+LFD+WV+SH A KGLLNKPFP+YD+L YVFGRDRATG  AETF 
Subjt:  MIGERMPVHNLTATT-IDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S +D+   R  R  E R GSSG
Subjt:  DVGSNVP-PGFEGFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein3.3e-0731.71Show/hide
Query:  RIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFGD
        R+K +K  +Q+  ++K    SGFGW+ E K   A  +++  ++K+H   K +  +   H++DL  +FG   ATG  A    D
Subjt:  RIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFGD

AT2G24960.2 unknown protein1.2e-0625.68Show/hide
Query:  RIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATG
        R K ++R +  I  +     +GF W+     +IA+ D++++++++H   +    K  P Y +LC++FG++ + G
Subjt:  RIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATG

AT4G02210.1 unknown protein5.1e-0827.27Show/hide
Query:  NLTATTIDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFG
        N     +  R K+++R F AI  +      GF W++E + + A+ +++  ++K+H   +  + +P P+Y DLC + G
Subjt:  NLTATTIDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFG

AT4G02210.2 unknown protein5.1e-0827.27Show/hide
Query:  NLTATTIDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFG
        N     +  R K+++R F AI  +      GF W++E + + A+ +++  ++K+H   +  + +P P+Y DLC + G
Subjt:  NLTATTIDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGCGAGAGGATGCCCGTACATAACTTAACGGCTACGACAATAGATTGTCGGATCAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAGATGAAGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATTCAGCCACAAAGGGCCTCCTAAACAAAC
CCTTTCCCCACTACGACGACCTTTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAACCTTCGGTGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTGCCCACTACGACGGAAACGATATGGAGAACCCGACGATGTACAGTCAGGGCTTGGACATGTCACCTAACGACATAATGACTCCACGATCGGTTCGTATGTATGA
GGTTAGGCCTGGTTCGAGCGGGCGGCATAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGCCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGGCGAGAGGATGCCCGTACATAACTTAACGGCTACGACAATAGATTGTCGGATCAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAGATGAAGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATTCAGCCACAAAGGGCCTCCTAAACAAAC
CCTTTCCCCACTACGACGACCTTTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAACCTTCGGTGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTGCCCACTACGACGGAAACGATATGGAGAACCCGACGATGTACAGTCAGGGCTTGGACATGTCACCTAACGACATAATGACTCCACGATCGGTTCGTATGTATGA
GGTTAGGCCTGGTTCGAGCGGGCGGCATAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGCCATTGTAG
Protein sequenceShow/hide protein sequence
MIGERMPVHNLTATTIDCRIKTMKRAFQAISEMKGPTCSGFGWNDELKCIIAEKDLFDSWVKSHSATKGLLNKPFPHYDDLCYVFGRDRATGGRAETFGDVGSNVPPGFE
GFAHYDGNDMENPTMYSQGLDMSPNDIMTPRSVRMYEVRPGSSGRHKLFAVPWNMLMTNLRPL