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PI0019957 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019957
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:7999833..8000087
RNA-Seq ExpressionPI0019957
SyntenyPI0019957
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025975.1 uncharacterized protein E6C27_scaffold34G002910 [Cucumis melo var. makuwa]3.3e-1570Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV
        MT+++YEK FT+LAKY L FVIDE+DKCK F +GLRIEIRA +TA+I+WSDFSKLV+V +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV

KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.1e-1557.53Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQ
        M I++YEK+F +LAKY L FV DE+DKCK FE+G+R EIRA +TAN+DWS+ SK+V+V +RVE+ +  +KK +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQ

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]5.5e-1862.03Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQERKGKP
        MT+ +YEK FT+LAKY LAFV++E DKCK FE+GLR EIRA +T ++DWSDFSKLVEVV+ VE+C+ ++KK    K  P
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQERKGKP

TYJ96623.1 Retrovirus-related Pol polyprotein from transposon opus [Cucumis melo var. makuwa]1.3e-1454.05Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQE
        MT+ +YEKK+T+L+KYV   + DE+++CK F +GLR EIR  MT   DW+DFSKLVE  +RVE+CL + K+++E
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQE

TYK04211.1 uncharacterized protein E5676_scaffold24967G00130 [Cucumis melo var. makuwa]5.7e-1570Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV
        MT+V+YEK FT+LAKY + FVIDE+DKCK F +GLRIEIRA +TA+I+WSDFSKLV+V +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV

TrEMBL top hitse value%identityAlignment
A0A5A7SND8 Retrotrans_gag domain-containing protein1.6e-1570Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV
        MT+++YEK FT+LAKY L FVIDE+DKCK F +GLRIEIRA +TA+I+WSDFSKLV+V +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV

A0A5A7V3F2 Zf-CCHC domain-containing protein2.7e-1862.03Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQERKGKP
        MT+ +YEK FT+LAKY LAFV++E DKCK FE+GLR EIRA +T ++DWSDFSKLVEVV+ VE+C+ ++KK    K  P
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQERKGKP

A0A5D3BBD8 Retrovirus-related Pol polyprotein from transposon opus6.1e-1554.05Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQE
        MT+ +YEKK+T+L+KYV   + DE+++CK F +GLR EIR  MT   DW+DFSKLVE  +RVE+CL + K+++E
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQE

A0A5D3BWX9 Retrotrans_gag domain-containing protein2.8e-1570Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV
        MT+V+YEK FT+LAKY + FVIDE+DKCK F +GLRIEIRA +TA+I+WSDFSKLV+V +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVV

A0A5D3D2P1 Putative Retrotransposon protein5.5e-1657.53Show/hide
Query:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQ
        M I++YEK+F +LAKY L FV DE+DKCK FE+G+R EIRA +TAN+DWS+ SK+V+V +RVE+ +  +KK +
Subjt:  MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATCGTACAGTATGAGAAGAAATTTACTAAATTGGCTAAGTATGTGTTAGCCTTTGTGATTGATGAGATAGATAAATGCAAACTGTTTGAAGATGGTTTGCGAAT
TGAAATTAGAGCCTCAATGACGGCCAACATAGACTGGTCAGATTTCTCTAAATTAGTAGAAGTTGTCGTGAGAGTGGAGAGATGCTTGCCAAAAGAAAAGAAAAAGCAAG
AACGCAAAGGAAAGCCCATGCATTCAAAATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCATCGTACAGTATGAGAAGAAATTTACTAAATTGGCTAAGTATGTGTTAGCCTTTGTGATTGATGAGATAGATAAATGCAAACTGTTTGAAGATGGTTTGCGAAT
TGAAATTAGAGCCTCAATGACGGCCAACATAGACTGGTCAGATTTCTCTAAATTAGTAGAAGTTGTCGTGAGAGTGGAGAGATGCTTGCCAAAAGAAAAGAAAAAGCAAG
AACGCAAAGGAAAGCCCATGCATTCAAAATGTTAG
Protein sequenceShow/hide protein sequence
MTIVQYEKKFTKLAKYVLAFVIDEIDKCKLFEDGLRIEIRASMTANIDWSDFSKLVEVVVRVERCLPKEKKKQERKGKPMHSKC