; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0019977 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019977
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description39S ribosomal protein L47, mitochondrial
Genome locationchr02:24130520..24134118
RNA-Seq ExpressionPI0019977
SyntenyPI0019977
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR010729 - Ribosomal protein L47, mitochondrial
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR038340 - MRP-L47 superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138121.1 39S ribosomal protein L47, mitochondrial [Cucumis sativus]1.1e-6997.9Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRTFLAAARSETSSATAAAAA ARTGYNPLEEFFEADRS DD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_008453113.1 PREDICTED: 39S ribosomal protein L47, mitochondrial [Cucumis melo]2.0e-6896.5Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRTFLAAARSETSSATAAAAA ARTGYNPLEEFFEADRS DD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_022968794.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita maxima]2.1e-6590.91Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        M LTR+FGRTFLAAARSETS+ATAAA + ARTGYNPLEEFFEA RS DDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIK VLTERAIDEPDPRR AE+KRM+NAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_023530690.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo]1.6e-6590.91Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTR+FGRTFLAAARSE S+ATAAA + ARTGYNPLEEFFE  RS +DDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIK VLTERAIDEPDPRRSAEMKRM+NAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

XP_038879389.1 39S ribosomal protein L47, mitochondrial [Benincasa hispida]4.4e-6895.8Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRTFLAAARSETSSAT AAAA AR GYNPLEEFFEADRS DDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIK VLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

TrEMBL top hitse value%identityAlignment
A0A0A0LS48 Uncharacterized protein5.1e-7097.9Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRTFLAAARSETSSATAAAAA ARTGYNPLEEFFEADRS DD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A1S3BWK4 39S ribosomal protein L47, mitochondrial9.6e-6996.5Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRTFLAAARSETSSATAAAAA ARTGYNPLEEFFEADRS DD KPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERI KVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1C2P6 39S ribosomal protein L47, mitochondrial5.5e-6492.31Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRVFGRT LAAARSETSSA AAAA+  RTGYNPLEEFFEADRS DDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQML+AQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
         NPERIPKVRKSMCRIK VLTERAI+EPDPRRSAEMKRMINAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1I0P6 39S ribosomal protein L47, mitochondrial-like9.9e-6690.91Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        M LTR+FGRTFLAAARSETS+ATAAA + ARTGYNPLEEFFEA RS DDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIK VLTERAIDEPDPRR AE+KRM+NAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

A0A6J1JCZ2 39S ribosomal protein L47, mitochondrial3.8e-6593.01Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF
        MFLTRV GR FLAAARSETSSA AAAA+ A TGYNPLEEFFEADRS DDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+F
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKF

Query:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        PNPERIPKVRKSMCRIK VLTERAIDEPDPRRSAEMKRM+NAL
Subjt:  PNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL

SwissProt top hitse value%identityAlignment
P87232 54S ribosomal protein L4, mitochondrial4.4e-1042.39Show/hide
Query:  NPLEEFFEADRS-QDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFP--NPERIPKVRKSMCRIKHVLTER
        +PL  FF   ++     +   +GR+W A ELR KS++DL+ LWY  L+EKN+L TQR  +    L  P  + ER+  V K+M  IK VL ER
Subjt:  NPLEEFFEADRS-QDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFP--NPERIPKVRKSMCRIKHVLTER

Q08DT6 39S ribosomal protein L47, mitochondrial8.5e-1449.43Show/hide
Query:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER
        LEEFF+  ++  ++K V  G SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER

Q2H080 54S ribosomal protein L4, mitochondrial3.0e-1143.27Show/hide
Query:  LEEFFEADRSQDDDKPVV--YGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNP---ERIPKVRKSMCRIKHVLTERAIDEPDPR
        L EFF+      +  P +  +GRSW A ELR KSWDDL++LW+V  KE+N + T     N   L F      ER   VR++M  IKHVLTER     D  
Subjt:  LEEFFEADRSQDDDKPVV--YGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNP---ERIPKVRKSMCRIKHVLTERAIDEPDPR

Query:  RSAE
        + AE
Subjt:  RSAE

Q8K2Y7 39S ribosomal protein L47, mitochondrial5.0e-1449.43Show/hide
Query:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER
        LEEFF+  ++  ++K V  G SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER

Q9HD33 39S ribosomal protein L47, mitochondrial3.2e-1348.28Show/hide
Query:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER
        LEEFF+  ++   +K V  G +W   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  +  V+ ER
Subjt:  LEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVRKSMCRIKHVLTER

Arabidopsis top hitse value%identityAlignment
AT1G07830.1 ribosomal protein L29 family protein6.2e-6081.25Show/hide
Query:  MFLTRVFGRTFLAAARSETSSATAAAAA-IARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLK
        MFLTR  GR FLAAA + + S TAAAAA   RT  NPLEEFFE DRSQD+DKPVVYGR WKASELRLKSWDDL KLWYVLLKEKNMLMTQRQML AQN++
Subjt:  MFLTRVFGRTFLAAARSETSSATAAAAA-IARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLK

Query:  FPNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL
        FPNPERIPKVR+SMCRIKHVLTERAI+EPD RRSAEMKRM+N +
Subjt:  FPNPERIPKVRKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGGTCAGAAACTTCTTCTGCCACAGCTGCTGCTGCTGCTATAGCTAGGACGGGCTATAACCCGCT
TGAGGAGTTTTTTGAGGCAGATAGAAGTCAAGATGATGACAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAGTCTTGGGACGATCTTAATA
AGCTATGGTATGTCCTTTTGAAGGAGAAGAATATGTTGATGACACAACGTCAGATGCTGAATGCACAAAATCTAAAGTTTCCTAATCCAGAACGCATTCCGAAGGTGAGG
AAGTCAATGTGTCGAATCAAGCATGTACTTACCGAGAGAGCCATCGATGAACCAGATCCTCGTAGATCCGCAGAGATGAAGAGGATGATAAATGCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
AATTTTCCTAATAAAAAGCTGTCGGCGTATCACCCTCGGGTCTCAAAGTCCCTCGCGCTTCGTAGACTTCCGTCGCCGCTGCTTCCTCGCTCGCCGCGGGAGCGCAGATC
GTTGCCGCTTGGCGGAGACAAGCCTTGTCCGAGCTTACCTGCTCCTTCTGTGTTCAGTCTGTCGCTTAGTAGTACGACCGCGACCTATAGAGTTACAGCATTAGTGCAGC
CATGTTTTTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGGTCAGAAACTTCTTCTGCCACAGCTGCTGCTGCTGCTATAGCTAGGACGGGCTATAACCCGC
TTGAGGAGTTTTTTGAGGCAGATAGAAGTCAAGATGATGACAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAGTCTTGGGACGATCTTAAT
AAGCTATGGTATGTCCTTTTGAAGGAGAAGAATATGTTGATGACACAACGTCAGATGCTGAATGCACAAAATCTAAAGTTTCCTAATCCAGAACGCATTCCGAAGGTGAG
GAAGTCAATGTGTCGAATCAAGCATGTACTTACCGAGAGAGCCATCGATGAACCAGATCCTCGTAGATCCGCAGAGATGAAGAGGATGATAAATGCTCTGTGATGACTGC
AAGTGTTTCAAAATCAGTCTAGTACACTGTAGATCTTATCATCTCAGAGACCAAAGGAGAAAGAGTTAGCGAGATATTGCACGTCTAATGCAAAGTCAGTTCAAATTCAT
TCTGTAATCGAAGATCTCGTTGGAACCCTAGAAACTGTTTGATGATTTCTAATCTTGTTTTTATCTTTACAATAATCAAAAGTTTCGAAGACTGTTTTTATTTGTGCCAA
GATAAAAAAACATTGGCCAAGTTTATTGTTAGAAGATTTGGAATACACGTGTGTATGTGTGTGGAACAAGTTGAAAATGAAAAAGTTGAC
Protein sequenceShow/hide protein sequence
MFLTRVFGRTFLAAARSETSSATAAAAAIARTGYNPLEEFFEADRSQDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLKFPNPERIPKVR
KSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL