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PI0019983 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0019983
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGeranylgeranyl transferase type-2 subunit beta
Genome locationchr01:3049708..3051372
RNA-Seq ExpressionPI0019983
SyntenyPI0019983
Gene Ontology termsGO:0018344 - protein geranylgeranylation (biological process)
GO:0005968 - Rab-protein geranylgeranyltransferase complex (cellular component)
GO:0004663 - Rab geranylgeranyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001330 - PFTB repeat
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659536.1 geranylgeranyl transferase type-2 subunit beta 1 [Cucumis sativus]9.1e-3774.55Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGN+GHDPHILYT SAVQVLALFDKL+VL+VDKVT+Y              IWGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++V  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

XP_022135990.1 geranylgeranyl transferase type-2 subunit beta 1-like [Momordica charantia]1.1e-3777.27Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGNIGHDPHILYT SAVQVLALFD+L+VL+VDKVT+Y              IWGEVDSRFSYIAIS LSLLHQLEKINVEKAVNYI   +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

XP_038887307.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hispida]8.2e-3877.27Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGNIGHDPHILYT SAVQVLALFDKL+V++VDKVTDY              IWGEVDSRFSYIA+S LSLL+QLEKINVEKAVNYIV  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

XP_038887310.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]8.2e-3877.27Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGNIGHDPHILYT SAVQVLALFDKL+V++VDKVTDY              IWGEVDSRFSYIA+S LSLL+QLEKINVEKAVNYIV  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

XP_038898588.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]1.6e-3674.55Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN+GHDPHILYT SAVQVLALFDKL+VL+VDKVT+Y              IWGEVDSRFSYIAI  LSLLHQL+KINVEKAVN+IV  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

TrEMBL top hitse value%identityAlignment
A0A0A0K723 Geranylgeranyl transferase type-2 subunit beta4.4e-3774.55Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGN+GHDPHILYT SAVQVLALFDKL+VL+VDKVT+Y              IWGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++V  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

A0A1S3CDW8 Geranylgeranyl transferase type-2 subunit beta9.8e-3773.64Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN+GHDPHILYT SAVQVLALFDKL+VL+VDKVT+Y              IWGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++V  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

A0A5A7UX72 Geranylgeranyl transferase type-2 subunit beta9.8e-3773.64Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN+GHDPHILYT SAVQVLALFDKL+VL+VDKVT+Y              IWGEVDSRFSYIAI  LSLLHQL+KINVEKAVN++V  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

A0A6J1C294 Geranylgeranyl transferase type-2 subunit beta5.2e-3877.27Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G SGNIGHDPHILYT SAVQVLALFD+L+VL+VDKVT+Y              IWGEVDSRFSYIAIS LSLLHQLEKINVEKAVNYI   +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPGGESHSGQ
Subjt:  TPGGESHSGQ

A0A6J1GS02 Geranylgeranyl transferase type-2 subunit beta9.8e-3774.55Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN+GHDPHILYT SAVQVLALFD L+VL+VDKVTDY              IWGEVDSRFSYIAIS LSLLHQL+KINVEKAVN+IV  +NMDGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
         PGGESHSGQ
Subjt:  TPGGESHSGQ

SwissProt top hitse value%identityAlignment
P53611 Geranylgeranyl transferase type-2 subunit beta9.5e-2951.82Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G+S +IGHDPH+LYT SAVQ+L L+D +NV++V+KV +Y              IWGE+D+RFS+ A++ L+LL +L+ INVEKA+ +++   N DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
         PG ESH+GQ
Subjt:  TPGGESHSGQ

P53612 Geranylgeranyl transferase type-2 subunit beta6.2e-2851.82Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G+S +IGHDPH+LYT SAVQ+L L+D ++V+ VDKV  Y              IWGE+D+RFS+ A++ L+LL +L+ INVEKA+ +++   N DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
         PG ESH+GQ
Subjt:  TPGGESHSGQ

Q5E9B3 Geranylgeranyl transferase type-2 subunit beta1.2e-2850.91Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G+S +IGHDPH+LYT SAVQ+L L+D +NV++++KV +Y              IWGE+D+RFS+ A++ L+LL +L+ INVEKA+ +++   N DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
         PG ESH+GQ
Subjt:  TPGGESHSGQ

Q84J75 Geranylgeranyl transferase type-2 subunit beta 12.9e-3361.82Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPHILYT SAVQ+LALFDK+N+L++ KV+ Y+              WGE+D+RFSYIAI  LS+L  L+KINVEKAV YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPG ESH+GQ
Subjt:  TPGGESHSGQ

Q9LHL5 Geranylgeranyl transferase type-2 subunit beta 22.2e-3362.73Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPH+LYT SAVQ+LALFDKLN+L+V+KV++Y              IWGEVD+RFSYIAI  LS+L  L+KINV+KAV+YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        +PG ESH+GQ
Subjt:  TPGGESHSGQ

Arabidopsis top hitse value%identityAlignment
AT3G12070.1 RAB geranylgeranyl transferase beta subunit 21.6e-3462.73Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPH+LYT SAVQ+LALFDKLN+L+V+KV++Y              IWGEVD+RFSYIAI  LS+L  L+KINV+KAV+YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        +PG ESH+GQ
Subjt:  TPGGESHSGQ

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 21.6e-3462.73Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPH+LYT SAVQ+LALFDKLN+L+V+KV++Y              IWGEVD+RFSYIAI  LS+L  L+KINV+KAV+YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDY--------------IWGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        +PG ESH+GQ
Subjt:  TPGGESHSGQ

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 12.0e-3461.82Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPHILYT SAVQ+LALFDK+N+L++ KV+ Y+              WGE+D+RFSYIAI  LS+L  L+KINVEKAV YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPG ESH+GQ
Subjt:  TPGGESHSGQ

AT5G12210.2 RAB geranylgeranyl transferase beta subunit 12.0e-3461.82Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC
        G +GN GHDPHILYT SAVQ+LALFDK+N+L++ KV+ Y+              WGE+D+RFSYIAI  LS+L  L+KINVEKAV YIV  +N+DGGFGC
Subjt:  GLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGGFGC

Query:  TPGGESHSGQ
        TPG ESH+GQ
Subjt:  TPGGESHSGQ

AT5G40280.1 Prenyltransferase family protein1.2e-0530.36Show/hide
Query:  GLSGNIGHDPHILYTPSAVQVLALF--DK-LNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGG
        G  G  G  PH+  T +AV  L     DK L+ +  +K++ ++               GE+D R  Y AIS  S+L+ ++    +   +YI+  Q  +GG
Subjt:  GLSGNIGHDPHILYTPSAVQVLALF--DK-LNVLEVDKVTDYI--------------WGEVDSRFSYIAISRLSLLHQLEKINVEKAVNYIVIYQNMDGG

Query:  FGCTPGGESHSG
         G  PG E+H G
Subjt:  FGCTPGGESHSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGACCGATATCAAATGGAGGAAGGAAAATTAAGAGAAGAAGAGGAAGAGGGAAAAAGAAAATTAAGAGTAATTTTTTGGGCAAAACCCATTTTGGGGTTTGG
GGTTTGGGATTGGGTCTGTGGTTTGTCTGGCAACATTGGTCATGATCCGCACATACTTTATACCCCTAGTGCCGTACAAGTCTTGGCCCTCTTTGACAAGTTGAATGTTT
TAGAGGTTGATAAGGTGACAGATTACATTTGGGGTGAAGTAGATTCAAGGTTTTCATATATTGCAATATCTCGTCTATCATTATTACATCAACTGGAGAAAATCAATGTA
GAGAAGGCTGTGAACTACATTGTTATCTACCAAAATATGGATGGTGGATTTGGATGCACGCCTGGTGGAGAATCTCACTCTGGACAAAGTATTTTCAACATATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGACCGATATCAAATGGAGGAAGGAAAATTAAGAGAAGAAGAGGAAGAGGGAAAAAGAAAATTAAGAGTAATTTTTTGGGCAAAACCCATTTTGGGGTTTGG
GGTTTGGGATTGGGTCTGTGGTTTGTCTGGCAACATTGGTCATGATCCGCACATACTTTATACCCCTAGTGCCGTACAAGTCTTGGCCCTCTTTGACAAGTTGAATGTTT
TAGAGGTTGATAAGGTGACAGATTACATTTGGGGTGAAGTAGATTCAAGGTTTTCATATATTGCAATATCTCGTCTATCATTATTACATCAACTGGAGAAAATCAATGTA
GAGAAGGCTGTGAACTACATTGTTATCTACCAAAATATGGATGGTGGATTTGGATGCACGCCTGGTGGAGAATCTCACTCTGGACAAAGTATTTTCAACATATCTTGA
Protein sequenceShow/hide protein sequence
MENDRYQMEEGKLREEEEEGKRKLRVIFWAKPILGFGVWDWVCGLSGNIGHDPHILYTPSAVQVLALFDKLNVLEVDKVTDYIWGEVDSRFSYIAISRLSLLHQLEKINV
EKAVNYIVIYQNMDGGFGCTPGGESHSGQSIFNIS