; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020022 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020022
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease H
Genome locationchr03:24031325..24033422
RNA-Seq ExpressionPI0020022
SyntenyPI0020022
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.6e-13574.05Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSF  FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE+KKKK L K EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]7.2e-4056.9Show/hide
Query:  MVEHSEEHEILKSYVDSLHYQLTALQSSSEKIVHEYELWKTDHMQVKIDYDLQRRNFHMLMERVDQTIEFLRMVPRRANGFAEWTAYLRSSKSSKENIAR
        M E SEE++ILK+Y D LHYQLTALQ+SS++I  EYE   TD++Q+K+DYDL  R+F +L+ERVDQTIEFLRMV +RANGFAEW     S          
Subjt:  MVEHSEEHEILKSYVDSLHYQLTALQSSSEKIVHEYELWKTDHMQVKIDYDLQRRNFHMLMERVDQTIEFLRMVPRRANGFAEWTAYLRSSKSSKENIAR

Query:  PTPICHPYNTRYKSRIMEEQDKDMDKMTQEINNLGEQ-----------------GNITSLNSIVFTDDEIPPEG
         TPI HPYNTRYKS+IMEE+DKDMDKM QEINNLGEQ                     S N I  TDD I P G
Subjt:  PTPICHPYNTRYKSRIMEEQDKDMDKMTQEINNLGEQ-----------------GNITSLNSIVFTDDEIPPEG

KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]6.0e-13574.34Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDD+IPPEGLGHTK LHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVM DIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M    +SLN++LE LLKTPSN  RF LGYK  +YDKIR QEEKKKK LAK EMREF+PS+K IP LYD FKSAGISYSSH+SD KD LLTKM 
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]4.1e-13673.84Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKISP----
        GNITS NSIVFTDDEIPPEGL HTK LHIQ+KC+DYV+ARVLVDNGSALN+MPKSTLLKLPVD+SHIKSSTMVVK+FDGSRREVMGDIELP+KI P    
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKISP----

Query:  -------------------WL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                           W+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  -------------------WL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QEEKKKK LAK EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQK
        SL +A VAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ+
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQK

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.9e-13674.85Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE KKKK LAK EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREF
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+F
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREF

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]1.4e-13674.64Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITK VS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE+KKKK LAK EMREF+PS+K IP LYD FKSAGISYSSH+SD KD LLTKM 
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein7.6e-13674.05Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSF  FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE+KKKK L K EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

A0A5A7T1W2 Retrotrans_gag domain-containing protein3.5e-4056.9Show/hide
Query:  MVEHSEEHEILKSYVDSLHYQLTALQSSSEKIVHEYELWKTDHMQVKIDYDLQRRNFHMLMERVDQTIEFLRMVPRRANGFAEWTAYLRSSKSSKENIAR
        M E SEE++ILK+Y D LHYQLTALQ+SS++I  EYE   TD++Q+K+DYDL  R+F +L+ERVDQTIEFLRMV +RANGFAEW     S          
Subjt:  MVEHSEEHEILKSYVDSLHYQLTALQSSSEKIVHEYELWKTDHMQVKIDYDLQRRNFHMLMERVDQTIEFLRMVPRRANGFAEWTAYLRSSKSSKENIAR

Query:  PTPICHPYNTRYKSRIMEEQDKDMDKMTQEINNLGEQ-----------------GNITSLNSIVFTDDEIPPEG
         TPI HPYNTRYKS+IMEE+DKDMDKM QEINNLGEQ                     S N I  TDD I P G
Subjt:  PTPICHPYNTRYKSRIMEEQDKDMDKMTQEINNLGEQ-----------------GNITSLNSIVFTDDEIPPEG

A0A5A7T1W2 Retrotrans_gag domain-containing protein2.9e-13574.34Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDD+IPPEGLGHTK LHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVM DIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M    +SLN++LE LLKTPSN  RF LGYK  +YDKIR QEEKKKK LAK EMREF+PS+K IP LYD FKSAGISYSSH+SD KD LLTKM 
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

A0A5A7T5W2 Retrotrans_gag domain-containing protein2.0e-13673.84Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKISP----
        GNITS NSIVFTDDEIPPEGL HTK LHIQ+KC+DYV+ARVLVDNGSALN+MPKSTLLKLPVD+SHIKSSTMVVK+FDGSRREVMGDIELP+KI P    
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKISP----

Query:  -------------------WL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                           W+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  -------------------WL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QEEKKKK LAK EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQK
        SL +A VAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ+
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQK

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein9.0e-13774.85Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITKPVS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE KKKK LAK EMREF+PS+K IP LYDTFKSAGISYSS +SD KD LLTKME
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREF
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+F
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREF

A0A5D3DEB3 Retrotrans_gag domain-containing protein6.9e-13774.64Show/hide
Query:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----
        GNITS NSIVFTDDEIPPEGLGHTK LHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVK+FDGSRREVMGDIELP+KI      
Subjt:  GNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRREVMGDIELPIKIS-----

Query:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV
                          PW+     VPSTLHQKLKF+V SK+I ++GEEDFLITK VS PYV+A EEALECSFR FEI HAT+ME  +DEVIKPH+SKV
Subjt:  ------------------PWL-----VPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKV

Query:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME
        EVMTT +M  G +SLN++LE LLK PSN  RF LGYKP +YDKIR QE+KKKK LAK EMREF+PS+K IP LYD FKSAGISYSSH+SD KD LLTKM 
Subjt:  EVMTTSMMKDGSFSLNQSLEILLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKME

Query:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ
        SL +AAVAQEASFEG+TVYA PPDFELNNWD VDLPTFSR+FQ
Subjt:  SLLIAAVAQEASFEGDTVYAYPPDFELNNWDIVDLPTFSREFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGCACTCTGAAGAGCATGAGATATTGAAAAGTTATGTTGATTCCTTACACTATCAACTTACTGCATTACAAAGTTCAAGTGAGAAGATAGTGCATGAATATGA
ACTATGGAAGACAGATCACATGCAAGTGAAGATTGATTATGATTTGCAAAGGAGAAATTTCCATATGCTAATGGAACGTGTAGATCAGACGATTGAATTTCTCAGAATGG
TACCTAGAAGAGCAAATGGTTTCGCAGAATGGACAGCTTATTTAAGGTCTTCAAAATCTTCAAAGGAAAACATAGCTCGTCCTACTCCAATTTGTCATCCTTACAATACG
AGGTATAAAAGTAGAATCATGGAAGAACAAGACAAAGACATGGATAAAATGACACAAGAGATTAATAATCTTGGGGAACAAGGAAACATTACATCCTTAAATTCCATAGT
CTTTACGGATGATGAAATTCCTCCTGAAGGTTTAGGCCATACAAAAACACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGCAAGAGTTTTAGTGGATAATGGAT
CAGCTCTTAATATAATGCCTAAATCTACACTATTGAAGCTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAAATCCTTTGATGGGTCACGTAGAGAA
GTCATGGGTGACATTGAGTTACCAATCAAAATTAGCCCATGGCTGGTGCCATCCACATTGCATCAAAAATTGAAATTTGTTGTTAGGAGCAAGATGATTAGTCTGTTGGG
AGAGGAAGATTTCTTAATAACAAAACCTGTCTCAAACCCATATGTTAAAGCAGCAGAGGAAGCATTAGAGTGTTCTTTTCGCTTTTTTGAAATTGTCCACGCAACTATAA
TGGAAAAGGCTATAGATGAAGTGATAAAGCCACACAGGTCTAAAGTTGAAGTTATGACCACTAGCATGATGAAAGATGGAAGTTTTTCTTTGAATCAAAGCTTAGAGATA
CTTTTAAAAACACCGAGCAATAAAGAGAGATTTAGTTTGGGCTATAAGCCATTCGTATATGATAAAATTAGGTTTCAAGAAGAAAAGAAAAAAAAGCATTTGGCAAAGCA
AGAGATGAGGGAGTTTAATCCAAGTCTAAAATTTATACCAGCATTATACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTGATTCAAAGGATTGTC
TCTTAACGAAGATGGAGAGTTTATTGATTGCAGCAGTGGCACAAGAAGCATCATTTGAAGGCGACACAGTTTATGCTTATCCACCTGATTTCGAGCTTAACAACTGGGAT
ATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGCACTCTGAAGAGCATGAGATATTGAAAAGTTATGTTGATTCCTTACACTATCAACTTACTGCATTACAAAGTTCAAGTGAGAAGATAGTGCATGAATATGA
ACTATGGAAGACAGATCACATGCAAGTGAAGATTGATTATGATTTGCAAAGGAGAAATTTCCATATGCTAATGGAACGTGTAGATCAGACGATTGAATTTCTCAGAATGG
TACCTAGAAGAGCAAATGGTTTCGCAGAATGGACAGCTTATTTAAGGTCTTCAAAATCTTCAAAGGAAAACATAGCTCGTCCTACTCCAATTTGTCATCCTTACAATACG
AGGTATAAAAGTAGAATCATGGAAGAACAAGACAAAGACATGGATAAAATGACACAAGAGATTAATAATCTTGGGGAACAAGGAAACATTACATCCTTAAATTCCATAGT
CTTTACGGATGATGAAATTCCTCCTGAAGGTTTAGGCCATACAAAAACACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGCAAGAGTTTTAGTGGATAATGGAT
CAGCTCTTAATATAATGCCTAAATCTACACTATTGAAGCTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAAATCCTTTGATGGGTCACGTAGAGAA
GTCATGGGTGACATTGAGTTACCAATCAAAATTAGCCCATGGCTGGTGCCATCCACATTGCATCAAAAATTGAAATTTGTTGTTAGGAGCAAGATGATTAGTCTGTTGGG
AGAGGAAGATTTCTTAATAACAAAACCTGTCTCAAACCCATATGTTAAAGCAGCAGAGGAAGCATTAGAGTGTTCTTTTCGCTTTTTTGAAATTGTCCACGCAACTATAA
TGGAAAAGGCTATAGATGAAGTGATAAAGCCACACAGGTCTAAAGTTGAAGTTATGACCACTAGCATGATGAAAGATGGAAGTTTTTCTTTGAATCAAAGCTTAGAGATA
CTTTTAAAAACACCGAGCAATAAAGAGAGATTTAGTTTGGGCTATAAGCCATTCGTATATGATAAAATTAGGTTTCAAGAAGAAAAGAAAAAAAAGCATTTGGCAAAGCA
AGAGATGAGGGAGTTTAATCCAAGTCTAAAATTTATACCAGCATTATACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTGATTCAAAGGATTGTC
TCTTAACGAAGATGGAGAGTTTATTGATTGCAGCAGTGGCACAAGAAGCATCATTTGAAGGCGACACAGTTTATGCTTATCCACCTGATTTCGAGCTTAACAACTGGGAT
ATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAAAGTAA
Protein sequenceShow/hide protein sequence
MVEHSEEHEILKSYVDSLHYQLTALQSSSEKIVHEYELWKTDHMQVKIDYDLQRRNFHMLMERVDQTIEFLRMVPRRANGFAEWTAYLRSSKSSKENIARPTPICHPYNT
RYKSRIMEEQDKDMDKMTQEINNLGEQGNITSLNSIVFTDDEIPPEGLGHTKTLHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKSFDGSRRE
VMGDIELPIKISPWLVPSTLHQKLKFVVRSKMISLLGEEDFLITKPVSNPYVKAAEEALECSFRFFEIVHATIMEKAIDEVIKPHRSKVEVMTTSMMKDGSFSLNQSLEI
LLKTPSNKERFSLGYKPFVYDKIRFQEEKKKKHLAKQEMREFNPSLKFIPALYDTFKSAGISYSSHDSDSKDCLLTKMESLLIAAVAQEASFEGDTVYAYPPDFELNNWD
IVDLPTFSREFQK