; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020029 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020029
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr09:11476335..11481040
RNA-Seq ExpressionPI0020029
SyntenyPI0020029
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72555.1 hypothetical protein VITISV_015793 [Vitis vinifera]2.6e-0857.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN  L R  G PRSSR+ N+MDW E S KVRC +C +EGHN R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]3.4e-0847.69Show/hide
Query:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH
        ++SF  + PN +L +  G PR++R+HN+MDW E    +RC +C+ EGHN+RTCP + S  SSS H
Subjt:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH

KAA0054037.1 uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa]3.4e-0849.23Show/hide
Query:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH
        ++SF  + PN +L +  G PR++R+HNKMDW E S  + C +C+ EGHN+RTCP + S  SSS H
Subjt:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH

RVW52006.1 hypothetical protein CK203_068088 [Vitis vinifera]5.2e-0957.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN NL R  G PRSSR+ N+MDW E S K+RC +C +EGHN+R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

RVX19406.1 hypothetical protein CK203_008540 [Vitis vinifera]5.2e-0957.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN NL R  G PRSSR+ N+MDW E S K+RC +C +EGHN+R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

TrEMBL top hitse value%identityAlignment
A0A438EWG2 SWIM-type domain-containing protein2.5e-0957.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN NL R  G PRSSR+ N+MDW E S K+RC +C +EGHN+R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

A0A438KDW5 SWIM-type domain-containing protein2.5e-0957.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN NL R  G PRSSR+ N+MDW E S K+RC +C +EGHN+R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

A0A5A7TN56 SWIM-type domain-containing protein1.6e-0847.69Show/hide
Query:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH
        ++SF  + PN +L +  G PR++R+HN+MDW E    +RC +C+ EGHN+RTCP + S  SSS H
Subjt:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH

A0A5D3BS92 SWIM-type domain-containing protein1.6e-0847.69Show/hide
Query:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH
        ++SF  + PN +L +  G PR++R+HN+MDW E    +RC +C+ EGHN+RTCP + S  SSS H
Subjt:  DVSFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVCE-EGHNKRTCPIQLSGVSSSNH

A5BP71 PMD domain-containing protein1.3e-0857.69Show/hide
Query:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP
        +F ++HPN  L R  G PRSSR+ N+MDW E S KVRC +C +EGHN R CP
Subjt:  SFEVIHPNENLSRKLGYPRSSRVHNKMDWHERSAKVRCIVC-EEGHNKRTCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTTGGTGCGAGCTTGAAGGAGATGGAGAGTTAGGGATGGAAGTTGTTTTAAAAGTGTCTTGGGACTCAGTCCCCAAAAACATCTCTTCCTCTTTCAAACTTTC
AACAGAGAACCATCATTTCCCTCCCTATCGTCGCACTTTCCCAACCAAAGATCCAGTTCTGCCGCCTGGTTGCCGTCATCCATTGTCCGTCGTGGTTAGATCTACAAAGA
CCTCAACTCAGAGAATAGGAAGATCTCCAAGTGGTGGTGCCCCAACTTGGTGTTTGGTAGTTGTCAACGACGTGTCATTTGAAGTAATTCATCCCAATGAGAACTTATCA
AGGAAACTTGGATATCCACGAAGTTCTCGAGTTCACAATAAGATGGATTGGCATGAGAGGAGTGCAAAAGTTCGATGTATTGTATGCGAAGAAGGTCATAACAAACGTAC
TTGTCCAATACAACTTTCTGGTGTTTCCTCTTCGAACCATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTTGGTGCGAGCTTGAAGGAGATGGAGAGTTAGGGATGGAAGTTGTTTTAAAAGTGTCTTGGGACTCAGTCCCCAAAAACATCTCTTCCTCTTTCAAACTTTC
AACAGAGAACCATCATTTCCCTCCCTATCGTCGCACTTTCCCAACCAAAGATCCAGTTCTGCCGCCTGGTTGCCGTCATCCATTGTCCGTCGTGGTTAGATCTACAAAGA
CCTCAACTCAGAGAATAGGAAGATCTCCAAGTGGTGGTGCCCCAACTTGGTGTTTGGTAGTTGTCAACGACGTGTCATTTGAAGTAATTCATCCCAATGAGAACTTATCA
AGGAAACTTGGATATCCACGAAGTTCTCGAGTTCACAATAAGATGGATTGGCATGAGAGGAGTGCAAAAGTTCGATGTATTGTATGCGAAGAAGGTCATAACAAACGTAC
TTGTCCAATACAACTTTCTGGTGTTTCCTCTTCGAACCATGGATGA
Protein sequenceShow/hide protein sequence
MEGWCELEGDGELGMEVVLKVSWDSVPKNISSSFKLSTENHHFPPYRRTFPTKDPVLPPGCRHPLSVVVRSTKTSTQRIGRSPSGGAPTWCLVVVNDVSFEVIHPNENLS
RKLGYPRSSRVHNKMDWHERSAKVRCIVCEEGHNKRTCPIQLSGVSSSNHG