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PI0020059 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020059
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr02:15583746..15584892
RNA-Seq ExpressionPI0020059
SyntenyPI0020059
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036513.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-2448.34Show/hide
Query:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWS---------DFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP
        N+ + ++TV  YEK+F +LAKYA  FV+DE DKCK+F+D LQTEI+A +T NM+W+         D S   + A  V +    +K       GPSG K P
Subjt:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWS---------DFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP

Query:  GIPKSQGKVYMMTQSEA-RNRPHVITKPLEDGMLISTPLGEVIMVKSVCRD
           K QG V  MT+SEA R+ PHVIT+PLE  +LISTP GEV +++ VCRD
Subjt:  GIPKSQGKVYMMTQSEA-RNRPHVITKPLEDGMLISTPLGEVIMVKSVCRD

KAA0052004.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.5e-2136.09Show/hide
Query:  VEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP---GIPKSQG
        +++  +++  YE K+ +L++YA   V  E+D+C+RFE  L +EI+ P+T    WS+FS+LVE A+RVE+ + + K     ++G + ++     G P  QG
Subjt:  VEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP---GIPKSQG

Query:  KVYMMTQSEARNRPHVIT----KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCWIAPIRK
        KVY MTQ  A+N P VIT    KPL + ++I TP+G+ ++V  V RD      +  P + +      RK
Subjt:  KVYMMTQSEARNRPHVIT----KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCWIAPIRK

KAA0062038.1 hypothetical protein E6C27_scaffold89G003760 [Cucumis melo var. makuwa]7.6e-2164.37Show/hide
Query:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSG
        N+ +  +TV GYEK+FT+LAKYALAFVVDE DKCKRFE+ LQTEI A +T +MD   FS+LVE AMRVERC+  +KKNK ++K P G
Subjt:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSG

KAA0062762.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]5.8e-2168.35Show/hide
Query:  MTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGP
        MTVT YEK FT+LAKYALAFVV+E DKCKRFE+ L+TEI+A +T +MDWSDFS+LVEV M VE+C+V++KKN   +K P
Subjt:  MTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGP

TYJ96623.1 Retrovirus-related Pol polyprotein from transposon opus [Cucumis melo var. makuwa]2.0e-2134.52Show/hide
Query:  ESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRK--------------------
        + +MTV  YEKK+T+L+KY    + DE+++CKRF + L+ EI+ PMT   DW+DFS+LVE A+RVE+CL + K+ + T K                    
Subjt:  ESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRK--------------------

Query:  -------------GPSG--SKGP-GIPKSQGKVYMMTQSEARNRPHVIT-------KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCW
                     G SG   KGP G+ + +GKV+ MTQ E    P+++T       + L + +LISTP+G+  +V S  +  + L  ++  N+   W
Subjt:  -------------GPSG--SKGP-GIPKSQGKVYMMTQSEARNRPHVIT-------KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCW

TrEMBL top hitse value%identityAlignment
A0A5A7T0V0 DNA/RNA polymerases superfamily protein7.2e-2548.34Show/hide
Query:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWS---------DFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP
        N+ + ++TV  YEK+F +LAKYA  FV+DE DKCK+F+D LQTEI+A +T NM+W+         D S   + A  V +    +K       GPSG K P
Subjt:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWS---------DFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP

Query:  GIPKSQGKVYMMTQSEA-RNRPHVITKPLEDGMLISTPLGEVIMVKSVCRD
           K QG V  MT+SEA R+ PHVIT+PLE  +LISTP GEV +++ VCRD
Subjt:  GIPKSQGKVYMMTQSEA-RNRPHVITKPLEDGMLISTPLGEVIMVKSVCRD

A0A5A7U9I0 Transposon Ty3-I Gag-Pol polyprotein7.4e-2236.09Show/hide
Query:  VEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP---GIPKSQG
        +++  +++  YE K+ +L++YA   V  E+D+C+RFE  L +EI+ P+T    WS+FS+LVE A+RVE+ + + K     ++G + ++     G P  QG
Subjt:  VEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSGSKGP---GIPKSQG

Query:  KVYMMTQSEARNRPHVIT----KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCWIAPIRK
        KVY MTQ  A+N P VIT    KPL + ++I TP+G+ ++V  V RD      +  P + +      RK
Subjt:  KVYMMTQSEARNRPHVIT----KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCWIAPIRK

A0A5A7V373 Uncharacterized protein3.7e-2164.37Show/hide
Query:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSG
        N+ +  +TV GYEK+FT+LAKYALAFVVDE DKCKRFE+ LQTEI A +T +MD   FS+LVE AMRVERC+  +KKNK ++K P G
Subjt:  NVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGPSG

A0A5A7V3F2 Zf-CCHC domain-containing protein2.8e-2168.35Show/hide
Query:  MTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGP
        MTVT YEK FT+LAKYALAFVV+E DKCKRFE+ L+TEI+A +T +MDWSDFS+LVEV M VE+C+V++KKN   +K P
Subjt:  MTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRKGP

A0A5D3BBD8 Retrovirus-related Pol polyprotein from transposon opus9.7e-2234.52Show/hide
Query:  ESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRK--------------------
        + +MTV  YEKK+T+L+KY    + DE+++CKRF + L+ EI+ PMT   DW+DFS+LVE A+RVE+CL + K+ + T K                    
Subjt:  ESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRVERCLVKEKKNKNTRK--------------------

Query:  -------------GPSG--SKGP-GIPKSQGKVYMMTQSEARNRPHVIT-------KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCW
                     G SG   KGP G+ + +GKV+ MTQ E    P+++T       + L + +LISTP+G+  +V S  +  + L  ++  N+   W
Subjt:  -------------GPSG--SKGP-GIPKSQGKVYMMTQSEARNRPHVIT-------KPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACGAGGAAGGCCAAGGCGAGGTAGGCAAGTGGCAACTGGTGTTCGAGCTACTGAGACCGCTAATAGAGCACTAGAATCGGATGACATATCGAGTAATCCCCA
TAACGCAGCTGAACAAAACGTGGAAGAAAGCAACATGACGGTCACAGGTTATGAAAAGAAATTTACGAAATTGGCTAAGTATGCGTTAGCCTTTGTAGTTGATGAAATGG
ATAAATGCAAACGGTTTGAAGACAGTTTGCAAACAGAAATCAAAGCCCCAATGACGGCCAACATGGACTGGTCTGATTTCTCCAGATTAGTAGAAGTTGCCATGAGAGTG
GAAAGATGTTTGGTAAAAGAAAAGAAAAACAAGAACACGAGGAAAGGGCCAAGTGGAAGCAAGGGGCCAGGGATACCCAAGTCGCAAGGAAAAGTCTACATGATGACCCA
GAGTGAGGCCAGAAATAGGCCACATGTGATCACAAAACCTCTAGAAGATGGAATGTTGATTAGCACGCCTTTAGGCGAGGTGATTATGGTAAAGTCTGTATGTAGGGACT
ACGTGACCTTGGAATGGATTTCCTCACCAAATATCACGCAGTGCTGGATTGCTCCAATAAGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACGAGGAAGGCCAAGGCGAGGTAGGCAAGTGGCAACTGGTGTTCGAGCTACTGAGACCGCTAATAGAGCACTAGAATCGGATGACATATCGAGTAATCCCCA
TAACGCAGCTGAACAAAACGTGGAAGAAAGCAACATGACGGTCACAGGTTATGAAAAGAAATTTACGAAATTGGCTAAGTATGCGTTAGCCTTTGTAGTTGATGAAATGG
ATAAATGCAAACGGTTTGAAGACAGTTTGCAAACAGAAATCAAAGCCCCAATGACGGCCAACATGGACTGGTCTGATTTCTCCAGATTAGTAGAAGTTGCCATGAGAGTG
GAAAGATGTTTGGTAAAAGAAAAGAAAAACAAGAACACGAGGAAAGGGCCAAGTGGAAGCAAGGGGCCAGGGATACCCAAGTCGCAAGGAAAAGTCTACATGATGACCCA
GAGTGAGGCCAGAAATAGGCCACATGTGATCACAAAACCTCTAGAAGATGGAATGTTGATTAGCACGCCTTTAGGCGAGGTGATTATGGTAAAGTCTGTATGTAGGGACT
ACGTGACCTTGGAATGGATTTCCTCACCAAATATCACGCAGTGCTGGATTGCTCCAATAAGGAAGTAG
Protein sequenceShow/hide protein sequence
MAPRGRPRRGRQVATGVRATETANRALESDDISSNPHNAAEQNVEESNMTVTGYEKKFTKLAKYALAFVVDEMDKCKRFEDSLQTEIKAPMTANMDWSDFSRLVEVAMRV
ERCLVKEKKNKNTRKGPSGSKGPGIPKSQGKVYMMTQSEARNRPHVITKPLEDGMLISTPLGEVIMVKSVCRDYVTLEWISSPNITQCWIAPIRK