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PI0020120 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020120
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:26120232..26120974
RNA-Seq ExpressionPI0020120
SyntenyPI0020120
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]3.0e-3376.19Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+P  NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]1.3e-3379.05Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRPLANL+RPSG + QMR PTSPLSN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]4.6e-3478.1Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N A SPM++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRPLANL+RPSGG+ QMRPPTSP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]1.2e-3479.05Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRPLANL+RPSG + QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

TYK24225.1 hypothetical protein E5676_scaffold27G00310 [Cucumis melo var. makuwa]2.3e-3374.77Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMS DQYAM LGFTT+T+SK+RS GIRI SPTES TPPRPLANL+RPSG + QMR PTSPLSN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKRHLFKNI
         P+KR+  K +
Subjt:  APEKRHLFKNI

TrEMBL top hitse value%identityAlignment
A0A5A7U8A0 Uncharacterized protein1.4e-3376.19Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+P  NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

A0A5A7UFZ9 Uncharacterized protein6.5e-3479.05Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRPLANL+RPSG + QMR PTSPLSN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

A0A5A7URC1 Uncharacterized protein2.2e-3478.1Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N A SPM++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRPLANL+RPSGG+ QMRPPTSP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

A0A5D3CKX1 Uncharacterized protein5.9e-3579.05Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRPLANL+RPSG + QMRPP SP SN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKR
         P+KR
Subjt:  APEKR

A0A5D3DKS9 Uncharacterized protein1.1e-3374.77Show/hide
Query:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+  SSS N APSPMS DQYAM LGFTT+T+SK+RS GIRI SPTES TPPRPLANL+RPSG + QMR PTSPLSN ESSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APEKRHLFKNI
         P+KR+  K +
Subjt:  APEKRHLFKNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTTGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTTGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTACCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAA
CGACATCTATTCAAAAATATATTATTATTACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTTGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTTGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTACCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAA
CGACATCTATTCAAAAATATATTATTATTACTTTAA
Protein sequenceShow/hide protein sequence
MSFVRGRGRVSSTSSKGSCLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPLANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAVAPEK
RHLFKNILLLL