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PI0020126 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020126
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionThionin-like protein 2
Genome locationchr05:5117447..5118770
RNA-Seq ExpressionPI0020126
SyntenyPI0020126
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037367.1 thionin-like protein 2 [Cucumis melo var. makuwa]1.7e-0548.15Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        PV S+      +D H FCK+GC+   C K+ST ++L  +KVE+C N CDQ CMK
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0535.78Show/hide
Query:  MKSVIVICLIILSLFGGGSTTT---------------------------------PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV
        MKS++VIC  ILSL  G ST +                                 P  +  + N L D H FCK+GC+ SLC K ST  +    KVESCV
Subjt:  MKSVIVICLIILSLFGGGSTTT---------------------------------PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV

Query:  NRCDQMCMK
        N C + C+K
Subjt:  NRCDQMCMK

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-0636.7Show/hide
Query:  MKSVIVICLIILSLFGGGSTTT---------------------------------PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV
        MKS++VIC  ILSL  G ST +                                 P  + T+ N L D H FCK+GC+ SLC K ST  +    KVESCV
Subjt:  MKSVIVICLIILSLFGGGSTTT---------------------------------PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV

Query:  NRCDQMCMK
        N C + C+K
Subjt:  NRCDQMCMK

XP_004152967.1 thionin-like protein 2 [Cucumis sativus]1.3e-0554.9Show/hide
Query:  STTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        S  N N+ VD   FCK+GC+ S C K ST ++    KVESCVN CDQ+CMK
Subjt:  STTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

XP_038897055.1 thionin-like protein 2 [Benincasa hispida]1.7e-0534.86Show/hide
Query:  MKSVIVICLII---------------LSLFGGGSTTTPV------------------DSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV
        MKSV+VICLI+                  FG  ++ TP+                   ST ++N + D H FCK+GC+ S+C   ST  +   DKV+SCV
Subjt:  MKSVIVICLII---------------LSLFGGGSTTTPV------------------DSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCV

Query:  NRCDQMCMK
        + CD+ CMK
Subjt:  NRCDQMCMK

TrEMBL top hitse value%identityAlignment
A0A2R6QZT5 Thionin-like protein4.0e-0553.49Show/hide
Query:  VDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        VD H FCK+GC+ +LC+ IST +N   +KVESCV  C + C K
Subjt:  VDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

A0A4S4E3T3 Uncharacterized protein4.0e-0557.5Show/hide
Query:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        H+FCK+GC+ SLC+ IST +N   +KVESCVN C + C K
Subjt:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

A0A5D3BCH5 Thionin-like protein 28.1e-0648.15Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        PV S+      +D H FCK+GC+   C K+ST ++L  +KVE+C N CDQ CMK
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

A0A6J1KDK0 thionin-like protein 25.3e-0537.04Show/hide
Query:  MKSVIVICLIILSLFGGGSTT---------------TP-----------------VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVN
        MKSV+VIC  ILSL  G ST                TP                 + S       +D H FCK+GC+ SLC K ST  +    KVESCVN
Subjt:  MKSVIVICLIILSLFGGGSTT---------------TP-----------------VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVN

Query:  RCDQMCMK
         C + C+K
Subjt:  RCDQMCMK

A0A7J7FUW2 Uncharacterized protein4.0e-0557.5Show/hide
Query:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK
        H+FCK+GC+ SLC+ IST +N   +KVESCVN C + C K
Subjt:  HKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMK

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 28.7e-0532.73Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR
        P   + ++N + +   FCK+GC+   C  +S+ +N NV++V +CV+ C   C K+
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.6.2e-0632.73Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR
        P   + ++N + +   FCK+GC+   C  +S+ +N NV++V +CV+ C   C K+
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR

AT1G12672.1 unknown protein8.0e-0637.04Show/hide
Query:  VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR
        V    +TN++     +CK+GCS   C  +S+ +N NVDKV  CV+ C   C  +
Subjt:  VDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR

AT1G12672.2 unknown protein3.6e-0636.36Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR
        P     +TN++     +CK+GCS   C  +S+ +N NVDKV  CV+ C   C  +
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR

AT2G15010.1 Plant thionin9.8e-0437.74Show/hide
Query:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVD-KVESCVNRCDQMC
        P  S TN+  +V+V  +CK+GC  SLC  +++ + L+   KV   V RC + C
Subjt:  PVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVD-KVESCVNRCDQMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCAGTTATTGTAATTTGTTTGATTATTCTTAGCTTATTTGGTGGAGGATCCACAACTACACCTGTGGATTCCACTACGAATACCAACCAATTGGTTGATGTTCA
TAAATTTTGCAAAATTGGTTGTTCTGTTTCTCTCTGCAACAAGATTAGCACCCCGGAAAATTTGAATGTAGACAAAGTAGAAAGCTGTGTGAACCGGTGTGATCAAATGT
GCATGAAGCGCTGA
mRNA sequenceShow/hide mRNA sequence
GTTTAAATTAAGAGTGCTTATTTTTTTTTCTATATATTTAGATTTGTTTCGATCTCATTTTCTATAAACCCAAGTGCTTAACTATATATAATTTTGAGCCACAAAAAAAA
ATTTGAAATCGAGAAAAAATGAAATCAGTTATTGTAATTTGTTTGATTATTCTTAGCTTATTTGGTGGAGGATCCACAACTACACCTGTGGATTCCACTACGAATACCAA
CCAATTGGTTGATGTTCATAAATTTTGCAAAATTGGTTGTTCTGTTTCTCTCTGCAACAAGATTAGCACCCCGGAAAATTTGAATGTAGACAAAGTAGAAAGCTGTGTGA
ACCGGTGTGATCAAATGTGCATGAAGCGCTGATGCTAAAGAAAAGAAGATGAAGTACTGCGAGGAGAAAGGAGCAAGGATTGACTTTTCAAGAATATATGAATAAACAAA
AATCAGTTGTGAAATAAAAACCAAAGCTCTTTCTTTCATATTCAAGCATATGTTTTGTTTTGATATAAATGTAGTTAATTATGAGCAACATGTGAAAAACAACACTGTTT
TTTCTCTTTTTATGTTATATGAGAATGAAGTGTTATGTCAAAAATTTTGCCTTATTATAAATTATGTGTGTGTGTCTGTGGTTGGATTGGTTTGGTGATGAAAGGTTAAT
AATCTCGCAAATAAATTTTATTTCCTTGATTTGAAAA
Protein sequenceShow/hide protein sequence
MKSVIVICLIILSLFGGGSTTTPVDSTTNTNQLVDVHKFCKIGCSVSLCNKISTPENLNVDKVESCVNRCDQMCMKR