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PI0020145 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020145
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDynein light chain
Genome locationchr04:26085604..26086820
RNA-Seq ExpressionPI0020145
SyntenyPI0020145
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146843.1 dynein light chain 2, cytoplasmic [Cucumis sativus]4.7e-4989.66Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS-EEEQL
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDRI+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS +++Q 
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS-EEEQL

Query:  PDPT-QFSLMD-TLKP
        P+PT  FSLMD TLKP
Subjt:  PDPT-QFSLMD-TLKP

XP_008454627.1 PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo]5.1e-5191.38Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDR YGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E+QL 
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-

Query:  PDPT--QFSLMDTLKP
        PDP+   FSL+DTLKP
Subjt:  PDPT--QFSLMDTLKP

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]2.7e-4483.04Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A   +Q P
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
         PT F+  +TLK
Subjt:  DPTQFSLMDTLK

XP_022976611.1 dynein light chain LC6, flagellar outer arm [Cucurbita maxima]1.6e-4480.36Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKA+IGETDML+AMQQ+AL+LA+KALDSFDVTE TDIARFIKKEFD +YGGGWQCIVGTDFGSFVTHC GCFIYFCVGSLA+LLF+GS+ SE+   P
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
        +PTQFS+++T+K
Subjt:  DPTQFSLMDTLK

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]7.1e-5393.75Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKAIIGETDML+AMQQDALNLA+KALDSFDVTEATDIARFIKKEFD+IYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQ P
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
         PTQFS+M+TLK
Subjt:  DPTQFSLMDTLK

TrEMBL top hitse value%identityAlignment
A0A1S3BZU7 Dynein light chain2.5e-5191.38Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDR YGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E+QL 
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-

Query:  PDPT--QFSLMDTLKP
        PDP+   FSL+DTLKP
Subjt:  PDPT--QFSLMDTLKP

A0A5A7T1H5 Dynein light chain2.5e-5191.38Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDR YGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E+QL 
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQL-

Query:  PDPT--QFSLMDTLKP
        PDP+   FSL+DTLKP
Subjt:  PDPT--QFSLMDTLKP

A0A6J1FDE1 Dynein light chain1.7e-4483.04Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKA+IGETDML+AMQQDAL+LA+KALDSFDVTE TDIARFIKKEFD +YGGGWQCIVGTDFGSFVTHC GCFIYFCVGSLA+LLFRGS  S+ EQL 
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
        DPTQ S+++T+K
Subjt:  DPTQFSLMDTLK

A0A6J1FSQ1 Dynein light chain1.3e-4483.04Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A   +Q P
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
         PT F+  +TLK
Subjt:  DPTQFSLMDTLK

A0A6J1IHC9 Dynein light chain7.6e-4580.36Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP
        MLEGKA+IGETDML+AMQQ+AL+LA+KALDSFDVTE TDIARFIKKEFD +YGGGWQCIVGTDFGSFVTHC GCFIYFCVGSLA+LLF+GS+ SE+   P
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLP

Query:  DPTQFSLMDTLK
        +PTQFS+++T+K
Subjt:  DPTQFSLMDTLK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.0e-1752.81Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M E KA+I   DM E MQQDA++ A++AL+ F++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

O96860 Dynein light chain 2, cytoplasmic1.0e-1752.81Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA FIKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q22799 Dynein light chain 1, cytoplasmic2.2e-1750.56Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M++ KA+I   DM + MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q24117 Dynein light chain 1, cytoplasmic2.2e-1751.69Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q3MHR3 Dynein light chain 2, cytoplasmic5.0e-1750.56Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA+I   DM E MQQDA++ A++A++ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.3e-2253.26Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA
        MLEGKA++ ++DM   MQ  A+  AS+ALD FDV +   IA  IKKEFD  YG GWQC+VG++FG F TH  G FIYF + +L  L+F+G++
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA

AT3G16120.1 Dynein light chain type 1 family protein7.4e-2457.14Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA + ETDM   MQ  A+ +AS++LD FDV ++  IA  IKKEFD  YG GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT4G15930.1 Dynein light chain type 1 family protein1.8e-1444.71Show/hide
Query:  KAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        +A+I   DM + MQ++A+ +A  A + + V +  DIA  IKKEFD+ +G  W CIVG +FGS+VTH    F+YF +   A+LLF+
Subjt:  KAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

AT4G27360.1 Dynein light chain type 1 family protein1.7e-3678.02Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA++G+TDM + M++DAL+LASKALD FDVTE T IARFIKKEFDR YG GWQCIVGT FGSFVTHC GCFI+F VGSL ILLF+GS
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT5G20110.1 Dynein light chain type 1 family protein1.1e-1450Show/hide
Query:  DMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ YG  W CIVG+ FGSFVTH  GCFIYF +  L +LLF+
Subjt:  DMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGGAAAAGCAATCATCGGAGAAACGGATATGTTGGAGGCCATGCAACAAGACGCTCTTAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGC
CACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGGATATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGAT
GCTTCATTTATTTTTGTGTTGGAAGTCTTGCAATTTTGCTCTTTAGGGGTTCTGCTGCCTCTGAAGAAGAACAATTACCTGACCCAACTCAGTTTTCTCTTATGGACACT
CTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
CCTATCTCAATACATTTACTAGTGGGCGAGGTTTTTAGCTCCAATTTTTATGGCCAAAAATTGCTCCACCTATTTATAAACAATACAACCTTATTACTATGGTTTATCAC
ATACAAATTTTCTCACTCATCCCCCCCAACTCAAAAAGGAATGTAAAAAAAAAAAGAGAAAACAGAAGCATTTAACTTCAACACTTCAACTTATCCGACTATTCTTTTTG
GATTTAGTGATTGATTCTACGAAGATCCAATAGGGACCACGTAGAGAAAATATATGGACATGGATGAGGTTGGGAACACCAACCAAAGTTTATCCTAAAACTCTCTATAT
AACTAAACCTGTGTTCCCTTCAAGTTCTCTGCCCACAACCGCCGTAAGCTCTTTCGTGTGTGGTGATATAATATTTTATTATTTTAGCCATGTTAGAAGGAAAAGCAATC
ATCGGAGAAACGGATATGTTGGAGGCCATGCAACAAGACGCTCTTAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATCGCCCGTTTCAT
TAAAAAGGAATTTGACAGGATATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGATGCTTCATTTATTTTTGTGTTG
GAAGTCTTGCAATTTTGCTCTTTAGGGGTTCTGCTGCCTCTGAAGAAGAACAATTACCTGACCCAACTCAGTTTTCTCTTATGGACACTCTCAAACCATGATTATTACCA
ATTTTCTTTATTTGTCTTCTCTAATTATCATGTCATATCCCCAAATTTTAATCTTATAATTCATACCTATATGTATCAAAGTGATTTTTTAAATGCTTAAATCACTTTTT
CTTATCTTTCATATTATATATACTTTTAATCCTAGTTTCAAAATCAATTTTTATTGTGATGCCCAGTATAATCAGATTATTTAAATTTATTTTGAATATGGTTAGTTA
Protein sequenceShow/hide protein sequence
MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRIYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASEEEQLPDPTQFSLMDT
LKP