| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004137828.1 29 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] | 3.8e-135 | 89.58 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTL SLTLKTLS SNPKFKLFSLNPSSSI LLSNPISISSF+LPSHRVSPPFSSRFVRNVAVSSDY QEEGTLE DGDDSSYAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF+VDSAQLAGLFESAGQVERVE YDKTTGRSRGFGFVTMSTV EVEAAAQQFNGYELDGR LRVNYGPPPPKRDDSSF+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+RNRVHVSNLAWGVDDLTLENLFRE+G+V+EAKVVYDRDSG+SRGFGFVTYNSAEEVN AIQSLDGVDL GRPIRVTQAEARPPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| XP_008442686.1 PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | 3.9e-132 | 89.58 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTLSSLTLKTLS SNPKFKLFSLNPSSSI LL NPISISSFVLPSHRVS PFSSRFVRNVAVSSDYDQEE TLEADGDDS YAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PFSVDSAQLAGLFESAGQVERVE YDKTTG+SRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYG PPPKRDDS F+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+RNRVHVSNLAWGVDDLTLENLFRE G+V+EAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSL+GVDLVGR IRVTQAEA+PPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| XP_022935639.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] | 5.5e-118 | 81.25 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
M+ASA LTLSSLT KTLSFSNPKF+LFSLNP SSI SNPISIS+ VL S RVSP F SRFVRNVAVSSD+DQEE L+ DGDDSSYAPDL+LFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF++DSAQLAGLFESAGQVERVE YDK TGRSRGFGFVTMS V E EAAAQQFNGYEL+GR LRVNYGPPPPKRDDSSF+ S+NAS FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+ N VHVSNLAWGVDDLTLENLFREQG+VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAIQSLDGVDL GR IRVTQAEAR PRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| XP_023538708.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo] | 1.2e-117 | 81.25 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
M+ASA LTLSSLT KTLSFSNPKF LFSLNP SSI SNPISIS+ VL S RVSP F SRFVRNVAVSSD+DQEE L+ DGDDSSYAPDL+LFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF++DSAQLAGLFESAGQVERVE YDK TGRSRGFGFVTMS V E EAAAQQFNGYEL+GR LRVNYGPPPPKRDDSSF+ S+NAS FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+ N VHVSNLAWGVDDLTLENLFREQG+VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAIQSLDGVDL GR IRVTQAEAR PRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| XP_038905951.1 29 kDa ribonucleoprotein A, chloroplastic [Benincasa hispida] | 2.2e-127 | 85.76 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTLS+LTLKTLS SNPK KLFSLNPSS+ LLSNP SISS VL S RVSPPFSSRFVRNVAVSSDYDQEE TLEAD +++SYAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PFSVDSAQLAGLFESAGQVERVE YDKTTGRSRGFGFVTMS+VDEVEAAAQQFNGYELDGRSLRVNYGPPPP+RDDSSF+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+ NRVHVSNLAWGVDDLTLENLFRE G+VVEAKVVYDR+SG+SRGFGFVT+NSAEEVNNAIQSLDG +L GRPIRVTQAEARPPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LAY6 Uncharacterized protein | 1.8e-135 | 89.58 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTL SLTLKTLS SNPKFKLFSLNPSSSI LLSNPISISSF+LPSHRVSPPFSSRFVRNVAVSSDY QEEGTLE DGDDSSYAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF+VDSAQLAGLFESAGQVERVE YDKTTGRSRGFGFVTMSTV EVEAAAQQFNGYELDGR LRVNYGPPPPKRDDSSF+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+RNRVHVSNLAWGVDDLTLENLFRE+G+V+EAKVVYDRDSG+SRGFGFVTYNSAEEVN AIQSLDGVDL GRPIRVTQAEARPPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| A0A1S3B5S7 29 kDa ribonucleoprotein, chloroplastic | 1.9e-132 | 89.58 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTLSSLTLKTLS SNPKFKLFSLNPSSSI LL NPISISSFVLPSHRVS PFSSRFVRNVAVSSDYDQEE TLEADGDDS YAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PFSVDSAQLAGLFESAGQVERVE YDKTTG+SRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYG PPPKRDDS F+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+RNRVHVSNLAWGVDDLTLENLFRE G+V+EAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSL+GVDLVGR IRVTQAEA+PPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| A0A5A7TQA3 29 kDa ribonucleoprotein | 1.9e-132 | 89.58 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
MSASAASLTLSSLTLKTLS SNPKFKLFSLNPSSSI LL NPISISSFVLPSHRVS PFSSRFVRNVAVSSDYDQEE TLEADGDDS YAPDLKLFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PFSVDSAQLAGLFESAGQVERVE YDKTTG+SRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYG PPPKRDDS F+GSRNAS+FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+RNRVHVSNLAWGVDDLTLENLFRE G+V+EAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSL+GVDLVGR IRVTQAEA+PPRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| A0A6J1F601 29 kDa ribonucleoprotein, chloroplastic-like | 2.7e-118 | 81.25 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
M+ASA LTLSSLT KTLSFSNPKF+LFSLNP SSI SNPISIS+ VL S RVSP F SRFVRNVAVSSD+DQEE L+ DGDDSSYAPDL+LFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF++DSAQLAGLFESAGQVERVE YDK TGRSRGFGFVTMS V E EAAAQQFNGYEL+GR LRVNYGPPPPKRDDSSF+ S+NAS FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+ N VHVSNLAWGVDDLTLENLFREQG+VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAIQSLDGVDL GR IRVTQAEAR PRRQF
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| A0A6J1KUB7 29 kDa ribonucleoprotein, chloroplastic-like | 2.5e-116 | 80.49 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
M+ASA L LSSLT KTLSFSNPKF+LFSLNP SSI SNPISIS+ V SHRVSP F SRFVRNVAVSSD+DQEE L+ DGDDSSYAPDL+LFVGNL
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
PF++DSAQLAGLFESAGQVERVE YDK TGRSRGFGFVTMS V E EAAAQQFNGYEL+GR LRVN GPPPPKRDDSSF+ S+NAS FD
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNASKFD
Query: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQ
+ N VHVSNLAWGVDDLTLENLFREQG+VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAIQSLDGVDL GR IRVTQAEAR PRRQ
Subjt: SRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQ
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P49313 30 kDa ribonucleoprotein, chloroplastic | 7.3e-81 | 59.74 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNP-----KFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEAD---GDDSSYAPD
M++SA+SL SLT +TL P FSL PSS LS+P S FSSRFVR V + D+DQ E + D ++ +++PD
Subjt: MSASAASLTLSSLTLKTLSFSNP-----KFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEAD---GDDSSYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFK-
LK+FVGNL FS DSA LA LFE AG VE VE YDK TGRSRGFGFVTMS+ +EVEAA QQFNGYELDGR+LRVN GPPP KR++SSF+
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFK-
Query: ------GSRNASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPR
GSR FDS NRV+V NLAWGVD LE LF EQG VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAI+SLDGVDL GR IRV+ AEARPPR
Subjt: ------GSRNASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPR
Query: RQF
RQF
Subjt: RQF
|
|
| P49314 31 kDa ribonucleoprotein, chloroplastic | 3.6e-72 | 53.9 | Show/hide |
Query: ASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNP-----ISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
AS ++SSL ++ P SL P+S++ S P +S+SS + PF S F VA+ SD+DQ E +E + ++ DLKLFVGNL
Subjt: ASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNP-----ISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDSSYAPDLKLFVGNL
Query: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNAS---
PFSVDSA LAGLFE AG VE VE YDK +GRSRGFGFVTMST +EVEAA QQFNGYE+DGR++RVN GP P KR++SSF G R +
Subjt: PFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNAS---
Query: -----------------KFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAE
DS NRV+V NL+WGVDDL L+ LF EQG+VV+AKVVYDRDSGRSRGFGFVTY+SA+EVN+AI SL+G+DL GR IRV+ AE
Subjt: -----------------KFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAE
Query: ARPPRRQF
R PRRQF
Subjt: ARPPRRQF
|
|
| Q08935 29 kDa ribonucleoprotein A, chloroplastic | 1.0e-82 | 61.87 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNP-----KFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDS-----SYA
M++SA+SL SLT +TL P FSL PSS LS+ S FSSRFVR V + SD+DQ E DGDD +++
Subjt: MSASAASLTLSSLTLKTLSFSNP-----KFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLEADGDDS-----SYA
Query: PDLKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSF
PDLK+FVGNLPFS DSA LA LFE AG VE VE YDK TGRSRGFGFVTMS+ +EVEAA QQFNGYELDGR+LRVN GPPP KR++SSF
Subjt: PDLKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSF
Query: K-GSRNASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+ GSR FDS NRV+V NLAWGVD LE LF EQG VV+AKVVYDRDSGRSRGFGFVTY+SAEEVNNAI+SLDGVDL GR IRV+ AEARPPRRQF
Subjt: K-GSRNASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| Q43349 29 kDa ribonucleoprotein, chloroplastic | 8.6e-74 | 50.28 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
MSASA+SL+ + L S P + L PS S L S+ + +S F + + S P + SRFVRNVAVSSD++ EE + ADGDDS S++PD
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
LKLFVGNL F+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMST EVEAAAQQFNGYE +GR LRVN GPPPPKR++S +G
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
Query: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
R + S S NR++V NL+WGVDD+ LENLF EQG VVEA+V
Subjt: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
Query: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+YDRDSGRS+GFGFVT +S++EV AI SL+G DL GR IRV++AEARPPR QF
Subjt: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| Q9ZUU4 RNA-binding protein CP29B, chloroplastic | 6.2e-80 | 58.36 | Show/hide |
Query: MSASAASLTLSSLTLKTLSF--SNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLE--ADGDDSSYAPDLKLF
M+ASA+SL LSS K+L F S P + L+PS S L S+ + SF + + SP +SRF RNVA++S+++ EE A + S++ DLKLF
Subjt: MSASAASLTLSSLTLKTLSF--SNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLE--ADGDDSSYAPDLKLF
Query: VGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNA
VGNLPF+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMS+V EVEAAAQQFNGYELDGR LRVN GPPPPKR+D +G R++
Subjt: VGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNA
Query: -------------SKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARP
S S NRV+V NL+WGVDD+ LE+LF EQG VVEA+V+YDRDSGRS+GFGFVTY+S++EV NAI+SLDG DL GR IRV++AEARP
Subjt: -------------SKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARP
Query: PRRQF
PRRQ+
Subjt: PRRQF
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 4.4e-81 | 58.36 | Show/hide |
Query: MSASAASLTLSSLTLKTLSF--SNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLE--ADGDDSSYAPDLKLF
M+ASA+SL LSS K+L F S P + L+PS S L S+ + SF + + SP +SRF RNVA++S+++ EE A + S++ DLKLF
Subjt: MSASAASLTLSSLTLKTLSF--SNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPPFSSRFVRNVAVSSDYDQEEGTLE--ADGDDSSYAPDLKLF
Query: VGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNA
VGNLPF+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMS+V EVEAAAQQFNGYELDGR LRVN GPPPPKR+D +G R++
Subjt: VGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKGSRNA
Query: -------------SKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARP
S S NRV+V NL+WGVDD+ LE+LF EQG VVEA+V+YDRDSGRS+GFGFVTY+S++EV NAI+SLDG DL GR IRV++AEARP
Subjt: -------------SKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARP
Query: PRRQF
PRRQ+
Subjt: PRRQF
|
|
| AT3G53460.1 chloroplast RNA-binding protein 29 | 6.1e-75 | 50.28 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
MSASA+SL+ + L S P + L PS S L S+ + +S F + + S P + SRFVRNVAVSSD++ EE + ADGDDS S++PD
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
LKLFVGNL F+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMST EVEAAAQQFNGYE +GR LRVN GPPPPKR++S +G
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
Query: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
R + S S NR++V NL+WGVDD+ LENLF EQG VVEA+V
Subjt: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
Query: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+YDRDSGRS+GFGFVT +S++EV AI SL+G DL GR IRV++AEARPPR QF
Subjt: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| AT3G53460.2 chloroplast RNA-binding protein 29 | 6.1e-75 | 50.28 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
MSASA+SL+ + L S P + L PS S L S+ + +S F + + S P + SRFVRNVAVSSD++ EE + ADGDDS S++PD
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
LKLFVGNL F+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMST EVEAAAQQFNGYE +GR LRVN GPPPPKR++S +G
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
Query: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
R + S S NR++V NL+WGVDD+ LENLF EQG VVEA+V
Subjt: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
Query: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+YDRDSGRS+GFGFVT +S++EV AI SL+G DL GR IRV++AEARPPR QF
Subjt: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| AT3G53460.3 chloroplast RNA-binding protein 29 | 6.1e-75 | 50.28 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
MSASA+SL+ + L S P + L PS S L S+ + +S F + + S P + SRFVRNVAVSSD++ EE + ADGDDS S++PD
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
LKLFVGNL F+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMST EVEAAAQQFNGYE +GR LRVN GPPPPKR++S +G
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGYELDGRSLRVNYGPPPPKRDDSSFKG
Query: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
R + S S NR++V NL+WGVDD+ LENLF EQG VVEA+V
Subjt: SR----------------------------------------------------------NASKFDSRNRVHVSNLAWGVDDLTLENLFREQGHVVEAKV
Query: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
+YDRDSGRS+GFGFVT +S++EV AI SL+G DL GR IRV++AEARPPR QF
Subjt: VYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
| AT3G53460.4 chloroplast RNA-binding protein 29 | 3.2e-71 | 47.47 | Show/hide |
Query: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
MSASA+SL+ + L S P + L PS S L S+ + +S F + + S P + SRFVRNVAVSSD++ EE + ADGDDS S++PD
Subjt: MSASAASLTLSSLTLKTLSFSNPKFKLFSLNPSSSICLLSNPISISSFVLPSHRVSPP--FSSRFVRNVAVSSDYDQEEGTLEADGDDS------SYAPD
Query: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGY---------------------ELDG
LKLFVGNL F+VDSAQLA LFESAG VE VE YDK TGRSRGFGFVTMST EVEAAAQQFNGY E +G
Subjt: LKLFVGNLPFSVDSAQLAGLFESAGQVERVETHLVCPNFLEGYYDKTTGRSRGFGFVTMSTVDEVEAAAQQFNGY---------------------ELDG
Query: RSLRVNYGPPPPKRDDSSFKGSR----------------------------------------------------------NASKFDSRNRVHVSNLAWG
R LRVN GPPPPKR++S +G R + S S NR++V NL+WG
Subjt: RSLRVNYGPPPPKRDDSSFKGSR----------------------------------------------------------NASKFDSRNRVHVSNLAWG
Query: VDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
VDD+ LENLF EQG VVEA+V+YDRDSGRS+GFGFVT +S++EV AI SL+G DL GR IRV++AEARPPR QF
Subjt: VDDLTLENLFREQGHVVEAKVVYDRDSGRSRGFGFVTYNSAEEVNNAIQSLDGVDLVGRPIRVTQAEARPPRRQF
|
|
