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PI0020153 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020153
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease T(2)
Genome locationchr08:21957373..21958160
RNA-Seq ExpressionPI0020153
SyntenyPI0020153
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR033130 - Ribonuclease T2, His active site 2
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651058.1 hypothetical protein Csa_002465 [Cucumis sativus]4.1e-3339.35Show/hide
Query:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK
        MTQ + I Y LSL++ VNG  PF+FFQ VEQW                                                      LNI WP++ +G N 
Subjt:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK

Query:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI
         FWG+EW  HG C++PP++            + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  TGK QL EIVLC +K+  TLI
Subjt:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI

Query:  DCPRFVSNSCPSTFVW
        DCP FVSN+C  +FVW
Subjt:  DCPRFVSNSCPSTFVW

TYK25090.1 S-RNase [Cucumis melo var. makuwa]4.6e-4548.7Show/hide
Query:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------------------------------DLNIYWPNVIWGKNKLF
        M QH FI  LLSLLL VNG PFDFFQLVEQW                                                    DL+ YWP+VI G N+ F
Subjt:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------------------------------DLNIYWPNVIWGKNKLF

Query:  WGYEWRKHGACTNPPYT-----------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI
        W  EW+KHGAC +PP+            ++ YDLL ILN     + QMP + L  +DILNPI NAT K  GI CN NGIT KLQL+EIVLCFD N  TLI
Subjt:  WGYEWRKHGACTNPPYT-----------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI

Query:  DCPRFVSNSC-PSTFVWLLPQQSSVGVPDF
        DCP+FVSNSC    FVWLLPQQSS GVPD+
Subjt:  DCPRFVSNSC-PSTFVWLLPQQSSVGVPDF

XP_011651927.1 ribonuclease MC [Cucumis sativus]1.5e-5150.85Show/hide
Query:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW------------------------------------------------------DLNIYWPNVIWGKNK
        M QH+FI  LLS LL VNG PFDFFQLV+QW                                                       LN YWP+VI GKN 
Subjt:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW------------------------------------------------------DLNIYWPNVIWGKNK

Query:  LFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVT
         FW +EWRKH  C +PP+T             NK YDLL ILNDAGLS Q  KDL+SQ++L+PIKNATG  PGI CN NGIT KLQL EIVLCF  +  T
Subjt:  LFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVT

Query:  LIDCPRFVSNSCPS--TFVWLLPQQSSVGVPDFP
        LIDCP FVSN+C S   FVWLLPQQSSVGVPD+P
Subjt:  LIDCPRFVSNSCPS--TFVWLLPQQSSVGVPDFP

XP_031738690.1 ribonuclease MC-like [Cucumis sativus]4.1e-3339.35Show/hide
Query:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK
        MTQ + I Y LSL++ VNG  PF+FFQ VEQW                                                      LNI WP++ +G N 
Subjt:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK

Query:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI
         FWG+EW  HG C++PP++            + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  TGK QL EIVLC +K+  TLI
Subjt:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI

Query:  DCPRFVSNSCPSTFVW
        DCP FVSN+C  +FVW
Subjt:  DCPRFVSNSCPSTFVW

XP_038906187.1 ribonuclease MC-like [Benincasa hispida]1.4e-3350.31Show/hide
Query:  LVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNA
        LV  G PFD  Q+   +  LN YWP+VI G N+ FW +EW  HG C++PP+              N NYDLLAILN AGL P        Q I N I+ A
Subjt:  LVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNA

Query:  TGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSVGV
        TGK PG+ CN N  TG  QL+EI+LCFDKN VTLIDC  F   +CP  FVWL  Q  S+GV
Subjt:  TGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSVGV

TrEMBL top hitse value%identityAlignment
A0A0A0LAB0 Ribonuclease T(2)7.2e-5250.85Show/hide
Query:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW------------------------------------------------------DLNIYWPNVIWGKNK
        M QH+FI  LLS LL VNG PFDFFQLV+QW                                                       LN YWP+VI GKN 
Subjt:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW------------------------------------------------------DLNIYWPNVIWGKNK

Query:  LFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVT
         FW +EWRKH  C +PP+T             NK YDLL ILNDAGLS Q  KDL+SQ++L+PIKNATG  PGI CN NGIT KLQL EIVLCF  +  T
Subjt:  LFWGYEWRKHGACTNPPYT-------------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVT

Query:  LIDCPRFVSNSCPS--TFVWLLPQQSSVGVPDFP
        LIDCP FVSN+C S   FVWLLPQQSSVGVPD+P
Subjt:  LIDCPRFVSNSCPS--TFVWLLPQQSSVGVPDFP

A0A0A0LAN6 Ribonuclease T(2)2.0e-3339.35Show/hide
Query:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK
        MTQ + I Y LSL++ VNG  PF+FFQ VEQW                                                      LNI WP++ +G N 
Subjt:  MTQHLFIFYLLSLLLVVNGD-PFDFFQLVEQW-----------------------------------------------------DLNIYWPNVIWGKNK

Query:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI
         FWG+EW  HG C++PP++            + +DLL IL  AGL+PQ  ++L  Q+I+ PI+  T K PGI CN N  TGK QL EIVLC +K+  TLI
Subjt:  LFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI

Query:  DCPRFVSNSCPSTFVW
        DCP FVSN+C  +FVW
Subjt:  DCPRFVSNSCPSTFVW

A0A5D3DP91 Ribonuclease T(2)2.2e-4548.7Show/hide
Query:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------------------------------DLNIYWPNVIWGKNKLF
        M QH FI  LLSLLL VNG PFDFFQLVEQW                                                    DL+ YWP+VI G N+ F
Subjt:  MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQW----------------------------------------------------DLNIYWPNVIWGKNKLF

Query:  WGYEWRKHGACTNPPYT-----------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI
        W  EW+KHGAC +PP+            ++ YDLL ILN     + QMP + L  +DILNPI NAT K  GI CN NGIT KLQL+EIVLCFD N  TLI
Subjt:  WGYEWRKHGACTNPPYT-----------NKNYDLLAILNDA-GLSPQMPKD-LVSQDILNPIKNATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLI

Query:  DCPRFVSNSC-PSTFVWLLPQQSSVGVPDF
        DCP+FVSNSC    FVWLLPQQSS GVPD+
Subjt:  DCPRFVSNSC-PSTFVWLLPQQSSVGVPDF

A0A6J1EXD5 Ribonuclease T(2)2.9e-3250.65Show/hide
Query:  LVVNGDPFDFFQ---LVEQWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY-------------TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIK
        LV  G PF+  Q   LV Q  LN YWP+VI G N+ FW +EW  HG C++PP+             TN NYDLLAILN AGL P          I   I+
Subjt:  LVVNGDPFDFFQ---LVEQWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY-------------TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIK

Query:  NATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWL
         ATGK PG+ CN N  + K QL+EI+LCFDKN VTLIDC +F   +CPS FVWL
Subjt:  NATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWL

A0A6J1IAR7 Ribonuclease T(2)1.3e-3248.1Show/hide
Query:  VVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY-------------TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNAT
        V  G PFD  Q+   +  LN YWP+VI G N+ FW +EW  HG C++PP+             TN NYDLLAILN AGL P        Q I   I+ AT
Subjt:  VVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPY-------------TNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNAT

Query:  GKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSV
        GK PG+ CN N  + + QL+EI+LCFDKN VTLI+C +F   +CPS FVWL  Q  S+
Subjt:  GKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSV

SwissProt top hitse value%identityAlignment
O80323 Ribonuclease S-35.4e-1238.52Show/hide
Query:  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILNDAGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITG
        L I WPNV    KN LFW  EW KHG+C  P   N+N+              ++  IL+ A + P   K  +  DI N I+N A  K P + C   G T 
Subjt:  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILNDAGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITG

Query:  KLQLYEIVLCFDKNPVTLIDCP
          +L EI LC DK+    IDCP
Subjt:  KLQLYEIVLCFDKNPVTLIDCP

P23540 Ribonuclease MC5.2e-1531.58Show/hide
Query:  SLLLVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKN
        SL     G PFD  ++   Q  LN  WPNV+   N+ FW +EW KHG C+   +              NYD++  L      P   +    Q I   +K 
Subjt:  SLLLVVNGDPFDFFQLVE-QWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYT-----------NKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKN

Query:  ATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVW
          GK PG+ C  +  T    L ++V CF ++  TLIDC R   ++C + F++
Subjt:  ATGKNPGIHCNNNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVW

P80022 Extracellular ribonuclease LE4.9e-1336.29Show/hide
Query:  WPNVIW--GKNKLFWGYEWRKHGACTNPPYTNKN------------YDLLAILNDAGLSPQMPK-DLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLY
        WP +    G    FW +EW KHG C     TN++             DLL+IL  A + P     DLV  +I N IK+A G  P I CN +  +G  QLY
Subjt:  WPNVIW--GKNKLFWGYEWRKHGACTNPPYTNKN------------YDLLAILNDAGLSPQMPK-DLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLY

Query:  EIVLCFDKNPVTLIDCPRFVSNSC
        ++ +C D +  +LI+CP F    C
Subjt:  EIVLCFDKNPVTLIDCPRFVSNSC

P93460 Ribonuclease S-53.2e-1239.34Show/hide
Query:  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILNDAGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITG
        L I WPNV    KNKLFW  EW KHG C  P   N+N+              ++  IL+ A + P   K  +  DI N I+N A  K P + C   G T 
Subjt:  LNIYWPNVI-WGKNKLFWGYEWRKHGACTNPPYTNKNY--------------DLLAILNDAGLSPQMPKDLVSQDILNPIKN-ATGKNPGIHCNNNGITG

Query:  KLQLYEIVLCFDKNPVTLIDCP
          +L EI LC DK+    IDCP
Subjt:  KLQLYEIVLCFDKNPVTLIDCP

Q38717 Ribonuclease S-44.6e-1131.36Show/hide
Query:  WPNV----IWGKNKLFWGYEWRKHGACTNPPYTNKNY-----------DLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLY
        WP++    I G +  FW  +WRKHG+C  PP+ ++ Y           D+L IL +   +P  P+      + N I  A GK P + C       +  L 
Subjt:  WPNV----IWGKNKLFWGYEWRKHGACTNPPYTNKNY-----------DLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNGITGKLQLY

Query:  EIVLCFDKNPVTLIDCPR
        E+V+C D N  +++ CPR
Subjt:  EIVLCFDKNPVTLIDCPR

Arabidopsis top hitse value%identityAlignment
AT2G39780.1 ribonuclease 21.7e-0527.14Show/hide
Query:  LNIYWPNVIWGK-------NKLFWGYEWRKHGACTNPPYTNK-NYDLLA-----------ILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNG
        L  YWP++  G           FWG+EW KHG C++P + ++ NY L             +L  AG      +      I+  I+NA    P + C  + 
Subjt:  LNIYWPNVIWGK-------NKLFWGYEWRKHGACTNPPYTNK-NYDLLA-----------ILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCNNNG

Query:  ITGKLQLYEIVLCF--DKNPVTLI---------DCPRFVS
        I       EI +CF  D  P   +          CP++VS
Subjt:  ITGKLQLYEIVLCF--DKNPVTLI---------DCPRFVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAACATCTTTTCATTTTCTATCTTTTAAGTTTGTTGTTGGTTGTGAATGGTGATCCATTCGACTTCTTCCAACTAGTTGAACAATGGGATCTAAATATATATTG
GCCAAATGTAATATGGGGGAAAAACAAGCTATTTTGGGGATATGAATGGAGAAAGCACGGGGCATGTACAAACCCTCCTTATACCAATAAAAATTATGATCTGTTGGCAA
TTTTAAATGATGCTGGGCTCAGCCCCCAAATGCCCAAAGATCTCGTATCTCAAGACATCCTAAACCCCATTAAAAATGCAACAGGAAAGAATCCAGGCATCCATTGCAAC
AACAATGGTATAACTGGGAAGTTGCAATTGTATGAAATTGTACTGTGTTTTGACAAGAATCCAGTTACCCTCATTGACTGCCCTCGGTTTGTTAGCAACAGTTGTCCATC
TACATTCGTGTGGCTCCTCCCACAACAGAGTTCAGTTGGTGTTCCAGATTTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCAACATCTTTTCATTTTCTATCTTTTAAGTTTGTTGTTGGTTGTGAATGGTGATCCATTCGACTTCTTCCAACTAGTTGAACAATGGGATCTAAATATATATTG
GCCAAATGTAATATGGGGGAAAAACAAGCTATTTTGGGGATATGAATGGAGAAAGCACGGGGCATGTACAAACCCTCCTTATACCAATAAAAATTATGATCTGTTGGCAA
TTTTAAATGATGCTGGGCTCAGCCCCCAAATGCCCAAAGATCTCGTATCTCAAGACATCCTAAACCCCATTAAAAATGCAACAGGAAAGAATCCAGGCATCCATTGCAAC
AACAATGGTATAACTGGGAAGTTGCAATTGTATGAAATTGTACTGTGTTTTGACAAGAATCCAGTTACCCTCATTGACTGCCCTCGGTTTGTTAGCAACAGTTGTCCATC
TACATTCGTGTGGCTCCTCCCACAACAGAGTTCAGTTGGTGTTCCAGATTTTCCATGA
Protein sequenceShow/hide protein sequence
MTQHLFIFYLLSLLLVVNGDPFDFFQLVEQWDLNIYWPNVIWGKNKLFWGYEWRKHGACTNPPYTNKNYDLLAILNDAGLSPQMPKDLVSQDILNPIKNATGKNPGIHCN
NNGITGKLQLYEIVLCFDKNPVTLIDCPRFVSNSCPSTFVWLLPQQSSVGVPDFP