; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020161 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020161
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein RNA-directed DNA methylation 3
Genome locationchr03:7289601..7290634
RNA-Seq ExpressionPI0020161
SyntenyPI0020161
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0032784 - regulation of DNA-templated transcription, elongation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652013.1 hypothetical protein Csa_006830 [Cucumis sativus]7.9e-5586.81Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSG+DHNNW+SSGSSGAGN+SGWNNST GKE EESGG NSW+QTTKTDSQGGGWQKSASSWNAGTENQ VTKDVSS SKD GGWGKSAEPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG
        D E ANVGAQGGGA+ WEKPTSSWNTEQSRGENNS GG GG  G
Subjt:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG

TYJ99969.1 protein RNA-directed DNA methylation 3 [Cucumis melo var. makuwa]3.2e-6488.68Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSGNDHNNWKSSGSSGAGN+SGWNNSTA KEMEESGGQNSWSQ+TKTDSQGGGWQKSASSWNAGTENQ  TKDVSSGSKD GGWGKS EPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG
        D EKANVGAQGG   WEKPTSSWNTEQSRGENNS    GGGGGAWGKSSSA +GKSSSG
Subjt:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG

XP_008456802.1 PREDICTED: uncharacterized transmembrane protein DDB_G0289901-like, partial [Cucumis melo]3.2e-6488.68Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSGNDHNNWKSSGSSGAGN+SGWNNSTA KEMEESGGQNSWSQ+TKTDSQGGGWQKSASSWNAGTENQ  TKDVSSGSKD GGWGKS EPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG
        D EKANVGAQGG   WEKPTSSWNTEQSRGENNS    GGGGGAWGKSSSA +GKSSSG
Subjt:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG

XP_031736955.1 protein RNA-directed DNA methylation 3 isoform X1 [Cucumis sativus]7.9e-5586.81Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSG+DHNNW+SSGSSGAGN+SGWNNST GKE EESGG NSW+QTTKTDSQGGGWQKSASSWNAGTENQ VTKDVSS SKD GGWGKSAEPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG
        D E ANVGAQGGGA+ WEKPTSSWNTEQSRGENNS GG GG  G
Subjt:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG

XP_031736956.1 protein RNA-directed DNA methylation 3 isoform X2 [Cucumis sativus]7.9e-5586.81Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSG+DHNNW+SSGSSGAGN+SGWNNST GKE EESGG NSW+QTTKTDSQGGGWQKSASSWNAGTENQ VTKDVSS SKD GGWGKSAEPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG
        D E ANVGAQGGGA+ WEKPTSSWNTEQSRGENNS GG GG  G
Subjt:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0LN22 Uncharacterized protein3.8e-5586.81Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSG+DHNNW+SSGSSGAGN+SGWNNST GKE EESGG NSW+QTTKTDSQGGGWQKSASSWNAGTENQ VTKDVSS SKD GGWGKSAEPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG
        D E ANVGAQGGGA+ WEKPTSSWNTEQSRGENNS GG GG  G
Subjt:  DIEKANVGAQGGGAS-WEKPTSSWNTEQSRGENNSSGGGGGGGG

A0A1S3C5D0 uncharacterized transmembrane protein DDB_G0289901-like1.5e-6488.68Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSGNDHNNWKSSGSSGAGN+SGWNNSTA KEMEESGGQNSWSQ+TKTDSQGGGWQKSASSWNAGTENQ  TKDVSSGSKD GGWGKS EPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG
        D EKANVGAQGG   WEKPTSSWNTEQSRGENNS    GGGGGAWGKSSSA +GKSSSG
Subjt:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG

A0A5D3BLU8 Protein RNA-directed DNA methylation 31.5e-6488.68Show/hide
Query:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL
        +GSGWKEPSGNDHNNWKSSGSSGAGN+SGWNNSTA KEMEESGGQNSWSQ+TKTDSQGGGWQKSASSWNAGTENQ  TKDVSSGSKD GGWGKS EPSTL
Subjt:  EGSGWKEPSGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTL

Query:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG
        D EKANVGAQGG   WEKPTSSWNTEQSRGENNS    GGGGGAWGKSSSA +GKSSSG
Subjt:  DIEKANVGAQGGGASWEKPTSSWNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSG

A0A6J1JRE1 protein RNA-directed DNA methylation 3-like isoform X32.9e-3147.3Show/hide
Query:  GTKEGSGWKEP-SGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQ-NSWSQTTKTDSQ-GGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKS
        G ++GSGWKEP SGN+ NNWKSSGSSGA +NSGWN ST GKEMEES  Q NSWSQ TK D+Q GGGWQK+AS WN  TENQ V  DV+  +KD GGWGK 
Subjt:  GTKEGSGWKEP-SGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQ-NSWSQTTKTDSQ-GGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKS

Query:  AE-----------------------PSTLDIEKANVGAQGGG------------------------------------------ASWEKPTSSWNTEQSR
        A                         S+   ++ANVGAQGGG                                            W KPTSSWNTEQ +
Subjt:  AE-----------------------PSTLDIEKANVGAQGGG------------------------------------------ASWEKPTSSWNTEQSR

Query:  G-----------ENNSSGGGGGGGGAWGKSSSADDGKSSSG
        G            N     GGGGGGAW KSSSA+DGKSSSG
Subjt:  G-----------ENNSSGGGGGGGGAWGKSSSADDGKSSSG

A0A6J1JV02 protein RNA-directed DNA methylation 3-like isoform X22.9e-3147.3Show/hide
Query:  GTKEGSGWKEP-SGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQ-NSWSQTTKTDSQ-GGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKS
        G ++GSGWKEP SGN+ NNWKSSGSSGA +NSGWN ST GKEMEES  Q NSWSQ TK D+Q GGGWQK+AS WN  TENQ V  DV+  +KD GGWGK 
Subjt:  GTKEGSGWKEP-SGNDHNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQ-NSWSQTTKTDSQ-GGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKS

Query:  AE-----------------------PSTLDIEKANVGAQGGG------------------------------------------ASWEKPTSSWNTEQSR
        A                         S+   ++ANVGAQGGG                                            W KPTSSWNTEQ +
Subjt:  AE-----------------------PSTLDIEKANVGAQGGG------------------------------------------ASWEKPTSSWNTEQSR

Query:  G-----------ENNSSGGGGGGGGAWGKSSSADDGKSSSG
        G            N     GGGGGGAW KSSSA+DGKSSSG
Subjt:  G-----------ENNSSGGGGGGGGAWGKSSSADDGKSSSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTGACAGTGGGAGTGGGGGGTGGAGTGGTGGTGGTGGTGGTGATAGAGAGAAATTTGGATCAGACCGAGGTGGAGGTGGATTTAGAGGTAGAGGCCGTGGCAGA
TGGAACCAAGAAGGTGGTTCCTACGATGGTGACAATGGAGGGCGAAGAGGTGGTAGAGGTGGATATGGAGCCGAGGCCGTGGGAGGTCGTGGAAGGAGGAATCAAGACGG
TTCAAATGATGGCAATAATGATGATAAACCTGCAAGGTGGAGCAGTGGCGGTGGTGCAGGATCTTGGAACCAAGGAGGGGTCTGGTTGGAAGGAACCAAGTGGGAATGAT
CACAATAATTGGAAATCATCTGGTTCTTCTGGTGCAGGTAATAATTCTGGCTGGAACAATTCAACTGCAGGCAAGGAGATGGAAGAGAGTGGTGGTCAGAACAGCTGGAG
CCAAACAACAAAGACGGATTCTCAAGGCGGAGGCTGGCAGAAGTCAGCATCTAGTTGGAATGCCGGAACTGAGAATCAAGCAGTGACCAAGGATGTGAGTTCAGGTTCTA
AAGATGGTGGAGGTTGGGGAAAGTCTGCTGAGCCATCAACCCTGGACATAGAAAAAGCCAATGTAGGTGCCCAAGGAGGAGGAGCAAGTTGGGAGAAGCCTACATCTAGT
TGGAATACAGAGCAGTCTCGGGGTGAAAACAACAGTAGTGGTGGAGGAGGAGGAGGAGGAGGAGCTTGGGGTAAATCCAGTTCTGCCGACGATGGGAAGTCATCATCTGG
TGGGGTAGCTGATGAATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTGACAGTGGGAGTGGGGGGTGGAGTGGTGGTGGTGGTGGTGATAGAGAGAAATTTGGATCAGACCGAGGTGGAGGTGGATTTAGAGGTAGAGGCCGTGGCAGA
TGGAACCAAGAAGGTGGTTCCTACGATGGTGACAATGGAGGGCGAAGAGGTGGTAGAGGTGGATATGGAGCCGAGGCCGTGGGAGGTCGTGGAAGGAGGAATCAAGACGG
TTCAAATGATGGCAATAATGATGATAAACCTGCAAGGTGGAGCAGTGGCGGTGGTGCAGGATCTTGGAACCAAGGAGGGGTCTGGTTGGAAGGAACCAAGTGGGAATGAT
CACAATAATTGGAAATCATCTGGTTCTTCTGGTGCAGGTAATAATTCTGGCTGGAACAATTCAACTGCAGGCAAGGAGATGGAAGAGAGTGGTGGTCAGAACAGCTGGAG
CCAAACAACAAAGACGGATTCTCAAGGCGGAGGCTGGCAGAAGTCAGCATCTAGTTGGAATGCCGGAACTGAGAATCAAGCAGTGACCAAGGATGTGAGTTCAGGTTCTA
AAGATGGTGGAGGTTGGGGAAAGTCTGCTGAGCCATCAACCCTGGACATAGAAAAAGCCAATGTAGGTGCCCAAGGAGGAGGAGCAAGTTGGGAGAAGCCTACATCTAGT
TGGAATACAGAGCAGTCTCGGGGTGAAAACAACAGTAGTGGTGGAGGAGGAGGAGGAGGAGGAGCTTGGGGTAAATCCAGTTCTGCCGACGATGGGAAGTCATCATCTGG
TGGGGTAGCTGATGAATGGTAA
Protein sequenceShow/hide protein sequence
MTVTVGVGGGVVVVVVIERNLDQTEVEVDLEVEAVADGTKKVVPTMVTMEGEEVVEVDMEPRPWEVVEGGIKTVQMMAIMMINLQGGAVAVVQDLGTKEGSGWKEPSGND
HNNWKSSGSSGAGNNSGWNNSTAGKEMEESGGQNSWSQTTKTDSQGGGWQKSASSWNAGTENQAVTKDVSSGSKDGGGWGKSAEPSTLDIEKANVGAQGGGASWEKPTSS
WNTEQSRGENNSSGGGGGGGGAWGKSSSADDGKSSSGGVADEW