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PI0020162 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020162
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptioncalcium-binding protein CML39-like
Genome locationchr07:22423338..22424142
RNA-Seq ExpressionPI0020162
SyntenyPI0020162
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.2e-3996.63Show/hide
Query:  MKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        MKSNS  VSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALC+ADRNRDGKLGEEEIDQFVKYMMSKGYVV
Subjt:  MKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3076.14Show/hide
Query:  KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        KS +    SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-3376.04Show/hide
Query:  MSMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        MS FRPK+       +S+SAYS KEL++IF+QMDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALCHADRN DGKLGEEEID+FVKYM+S+GYVV
Subjt:  MSMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3076.14Show/hide
Query:  KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        KS +    SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRNRDGKLG +EID+F+KY+MS+GYVV
Subjt:  KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]6.0e-4598.95Show/hide
Query:  SMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        SMFRPK KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
Subjt:  SMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein2.9e-4598.95Show/hide
Query:  SMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        SMFRPK KSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
Subjt:  SMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

A0A5D3D9N2 Putative calcium-binding protein CML101.1e-3996.63Show/hide
Query:  MKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        MKSNS  VSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALC+ADRNRDGKLGEEEIDQFVKYMMSKGYVV
Subjt:  MKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

A0A6A1UYX3 Putative calcium-binding protein CML102.6e-0943.42Show/hide
Query:  YSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        Y+ ++LR +F + DTN DG L   E++NA + L +  P   A+ AL HADRN DG++ E E+D  V Y +  GY V
Subjt:  YSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

A0A6J1AEM7 probable calcium-binding protein CML159.8e-0942.53Show/hide
Query:  PVSSE-----SAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYV
        PVSS+        S  ++R IFN+ D N+DG L   E+K+A   L + MP   A+ AL HAD N DG + E E D+ VKY + +GY+
Subjt:  PVSSE-----SAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYV

W9S022 Putative calcium-binding protein CML102.6e-0942.31Show/hide
Query:  SAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV
        + Y  ++L+ +  + DT+ DG L   E+K A K+L A  P   A  ALCHAD+NRDG + EEE+   V Y   +GYV+
Subjt:  SAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G50770.1 calmodulin-like 419.4e-0429.33Show/hide
Query:  KSNSPPVSSESAYSA--KELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEE
        +SNS   ++  ++ A  +ELRQ+F+  D++ DG +  FE+++    +   +    A  A+   D + DG LG E+
Subjt:  KSNSPPVSSESAYSA--KELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGTTCCGTCCAAAAATGAAATCGAATTCACCACCCGTCTCGTCGGAAAGCGCCTACTCTGCTAAAGAGTTGAGACAGATCTTTAACCAGATGGATACGAATGA
AGACGGAGGATTGGGATTGTTCGAGATCAAGAACGCATTGAAGAAACTGGACGCTGAAATGCCGGTTCATCTTGCTTATAGTGCTCTCTGTCACGCCGATCGAAACAGAG
ATGGAAAGCTTGGCGAGGAAGAGATCGATCAGTTCGTGAAGTACATGATGAGCAAAGGTTATGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
GGATTCCAAATTTGTAGCCGCACCAATCCCAATGCAGAACACAAGATAACTCCGCATCTCAATTCTCTAATCACCGCCATTAATTTCCATTTTTCTCTATAAATTCCCCT
TTTCCTTTCTCTATTTTCAACAAATCAAATCCAATTCCCCAATTTCCCAAACCTAGCGGAACCACCAATCAATTACAGACTCATGTCGATGTTCCGTCCAAAAATGAAAT
CGAATTCACCACCCGTCTCGTCGGAAAGCGCCTACTCTGCTAAAGAGTTGAGACAGATCTTTAACCAGATGGATACGAATGAAGACGGAGGATTGGGATTGTTCGAGATC
AAGAACGCATTGAAGAAACTGGACGCTGAAATGCCGGTTCATCTTGCTTATAGTGCTCTCTGTCACGCCGATCGAAACAGAGATGGAAAGCTTGGCGAGGAAGAGATCGA
TCAGTTCGTGAAGTACATGATGAGCAAAGGTTATGTTGTCTGATTTTTATTTACTGCTCCGCCACCTCCCACGACGGCTGCTCTCTCTATCGATTGTTGATCTATCGTGG
GTTTCTATAAACTTGTCCAAATAAATGGCGGCTGCTTGTTATGTATATTTTTTTTTTTTTTTTCCTTTTTTTTCGAGTTCGAGCTGAAGTCAAAATTCCAACCTCTCTTG
TCTATAATTGATTGACAATATATATCTCAATCAGTTGTATTATATTTGTATATTTGTTCATATATTTATTCGGATAATTTAAGTTCGTGTGTATAATTATTTTTAGCTAA
TTACTCATTTTGTTCGATCACACTTTCAAAAACTG
Protein sequenceShow/hide protein sequence
MSMFRPKMKSNSPPVSSESAYSAKELRQIFNQMDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSKGYVV