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PI0020187 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020187
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:14351840..14355362
RNA-Seq ExpressionPI0020187
SyntenyPI0020187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032353.1 uncharacterized protein E6C27_scaffold219G002180 [Cucumis melo var. makuwa]1.6e-0650Show/hide
Query:  MRLNDEEIKFNIANAVKF-PYDESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGT---ESVNAVSGER
        MR ++EE+K N+ N +KF  Y E+C+A+ES  WDYCEEE  + L + EEFFK+       E VN VSG R
Subjt:  MRLNDEEIKFNIANAVKF-PYDESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGT---ESVNAVSGER

KAA0046019.1 hypothetical protein E6C27_scaffold243G005880 [Cucumis melo var. makuwa]7.5e-0956.45Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA
        M+LND+E+ FNI NA+KFP D E+CSA+ES  WDYC+EE  + L  PEEFFKD    + + A
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]2.7e-0651.43Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQG---TESVNAVSGER
        M  N+EEI FN+ NA+KFP + E+ SA+ES  WDYC+EEA   L + EEF ++ +     E VNAVSGE+
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQG---TESVNAVSGER

KAA0066655.1 uncharacterized protein E6C27_scaffold979G00870 [Cucumis melo var. makuwa]2.2e-0845.78Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNAVSGERNQNLWNFLKLSRLDRE
        M  NDEEIKFNI N +KFP D E+CSA+ESF WDYCEEEA   L +  EF ++ +    +  V+   ++N +  L L   D +
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNAVSGERNQNLWNFLKLSRLDRE

TYK11899.1 uncharacterized protein E5676_scaffold177G00620 [Cucumis melo var. makuwa]5.8e-0950.65Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA-VSGERNQNLWNFLK
        M+LND+E+ FNI NA+KFP D E+CSA+ES  WDYC+EE  + L  PEEFFKD    + + A      + NL + LK
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA-VSGERNQNLWNFLK

TrEMBL top hitse value%identityAlignment
A0A5A7TXP8 Uncharacterized protein3.7e-0956.45Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA
        M+LND+E+ FNI NA+KFP D E+CSA+ES  WDYC+EE  + L  PEEFFKD    + + A
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA

A0A5A7V931 Uncharacterized protein1.3e-0651.43Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQG---TESVNAVSGER
        M  N+EEI FN+ NA+KFP + E+ SA+ES  WDYC+EEA   L + EEF ++ +     E VNAVSGE+
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQG---TESVNAVSGER

A0A5D3BYK3 Uncharacterized protein1.1e-0845.78Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNAVSGERNQNLWNFLKLSRLDRE
        M  NDEEIKFNI N +KFP D E+CSA+ESF WDYCEEEA   L +  EF ++ +    +  V+   ++N +  L L   D +
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNAVSGERNQNLWNFLKLSRLDRE

A0A5D3CNQ4 Uncharacterized protein2.8e-0950.65Show/hide
Query:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA-VSGERNQNLWNFLK
        M+LND+E+ FNI NA+KFP D E+CSA+ES  WDYC+EE  + L  PEEFFKD    + + A      + NL + LK
Subjt:  MRLNDEEIKFNIANAVKFPYD-ESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGTESVNA-VSGERNQNLWNFLK

A0A5D3E7G0 Uncharacterized protein7.6e-0750Show/hide
Query:  MRLNDEEIKFNIANAVKF-PYDESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGT---ESVNAVSGER
        MR ++EE+K N+ N +KF  Y E+C+A+ES  WDYCEEE  + L + EEFFK+       E VN VSG R
Subjt:  MRLNDEEIKFNIANAVKF-PYDESCSAMESFSWDYCEEEASM-LLNPEEFFKDLQGT---ESVNAVSGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTTGAATGATGAGGAAATCAAGTTCAACATCGCAAACGCAGTGAAATTCCCTTATGATGAAAGTTGCAGCGCAATGGAATCCTTCAGTTGGGATTATTGTGAGGA
AGAAGCTTCTATGTTGCTCAACCCTGAAGAATTCTTTAAAGATCTACAAGGAACAGAAAGTGTAAATGCCGTGTCTGGCGAAAGGAATCAGAACCTTTGGAATTTCCTAA
AACTCTCTCGTCTTGATCGCGAAACTCATCGGAAACTTCATCCCTTATCCCAAACCTCATCGAAAACCTCATCCTTAATCCCAAAGATTGCCGGATCTTCAAGCAAACAC
CAAGATCAGATTAAAGTGCGTTCTGATGGTCCTGAATCAGAGCGACCTACATCGCGAGGAAGTGCATGGCAAAGAAAGGTGTTACTTAAGCCTCCGCCTGAAGCATCTGA
ACTCTTCGTGGAGGTGGAGGTTGATAATCTTGATAAAGATGCCGTTCTCGATTTTCTCAATGAGAGGTTGAAAAAGCGAAAAGACGCACACTTGAAGAGGACAAAGGAAG
CTCATCGCAGGAAAGACGAGCACGAGCGTCGGAGATTTGAGGATAACTCGCGATCAGCATTGCAATTAGGCGTTCAAGGAACTATCTGGCGAATAGCCAGCATATCACTA
TGCGATGTTGACGCGCAAAGAGACAAGAATGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTTGAATGATGAGGAAATCAAGTTCAACATCGCAAACGCAGTGAAATTCCCTTATGATGAAAGTTGCAGCGCAATGGAATCCTTCAGTTGGGATTATTGTGAGGA
AGAAGCTTCTATGTTGCTCAACCCTGAAGAATTCTTTAAAGATCTACAAGGAACAGAAAGTGTAAATGCCGTGTCTGGCGAAAGGAATCAGAACCTTTGGAATTTCCTAA
AACTCTCTCGTCTTGATCGCGAAACTCATCGGAAACTTCATCCCTTATCCCAAACCTCATCGAAAACCTCATCCTTAATCCCAAAGATTGCCGGATCTTCAAGCAAACAC
CAAGATCAGATTAAAGTGCGTTCTGATGGTCCTGAATCAGAGCGACCTACATCGCGAGGAAGTGCATGGCAAAGAAAGGTGTTACTTAAGCCTCCGCCTGAAGCATCTGA
ACTCTTCGTGGAGGTGGAGGTTGATAATCTTGATAAAGATGCCGTTCTCGATTTTCTCAATGAGAGGTTGAAAAAGCGAAAAGACGCACACTTGAAGAGGACAAAGGAAG
CTCATCGCAGGAAAGACGAGCACGAGCGTCGGAGATTTGAGGATAACTCGCGATCAGCATTGCAATTAGGCGTTCAAGGAACTATCTGGCGAATAGCCAGCATATCACTA
TGCGATGTTGACGCGCAAAGAGACAAGAATGGTAGTTGA
Protein sequenceShow/hide protein sequence
MRLNDEEIKFNIANAVKFPYDESCSAMESFSWDYCEEEASMLLNPEEFFKDLQGTESVNAVSGERNQNLWNFLKLSRLDRETHRKLHPLSQTSSKTSSLIPKIAGSSSKH
QDQIKVRSDGPESERPTSRGSAWQRKVLLKPPPEASELFVEVEVDNLDKDAVLDFLNERLKKRKDAHLKRTKEAHRRKDEHERRRFEDNSRSALQLGVQGTIWRIASISL
CDVDAQRDKNGS