CuGenDBv2

Gene ID	PI0020188
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein SPA, chloroplastic
Genome location	chr04:29587588..29589586
RNA-Seq Expression	PI0020188
Synteny	PI0020188
Gene Ontology terms	GO:0010206 - photosystem II repair (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domains	IPR035272 - Protein of unknown function DUF5351 IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136388.1 protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus]

3.1e-83

97.45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPT STSLSVTFS NQRSPPSYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGD+KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]

2.8e-84

99.36

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFS NQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022142253.1 protein SPA, chloroplastic [Momordica charantia]

1.9e-80

94.9

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFSRNQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]

4.5e-82

96.18

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]

5.3e-83

97.45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPS+SRLHSPFLYCPLKPTSSTSLSVTFSRNQRSP +YPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ55 Uncharacterized protein

1.5e-83

97.45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPT STSLSVTFS NQRSPPSYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGD+KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A1S3CRE4 protein SPA, chloroplastic

1.4e-84

99.36

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFS NQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1CMU6 protein SPA, chloroplastic

9.2e-81

94.9

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFSRNQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1F877 protein SPA, chloroplastic

2.2e-82

96.18

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1IFD3 protein SPA, chloroplastic

2.2e-82

96.18

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFSRNQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

SwissProt top hits

e value

%identity

Alignment

K4BVL1 Protein SPA, chloroplastic

5.8e-64

74.84

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Query:  MTVAPSLSRLHSPFLYCPLK-PT-SSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA
        M  APSLSR  SPF+  PLK PT SS+  +  F +  R   SYP I+A+DLDQNTV+A++VG++SVA+G+GIPVFYETQIDNAAKRENTQPCFPC+G+GA
Subjt:  MTVAPSLSRLHSPFLYCPLK-PT-SSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA

Query:  QRCRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        Q+CRFCMGTG+VTVELGG E EVSRCINCDG G LTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  QRCRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic

1.9e-62

75.48

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Query:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCR
        APS  RLHSPF++CP+  T S+      +RN RSP  SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQ+CR
Subjt:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCR

Query:  FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
         C+G+GNVTVELGG EKEVS CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.3e-63

75.48

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Query:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCR
        APS  RLHSPF++CP+  T S+      +RN RSP  SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQ+CR
Subjt:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCR

Query:  FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
         C+G+GNVTVELGG EKEVS CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

AT4G13670.1 plastid transcriptionally active 5

6.9e-04

29.7

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Query:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDE--KEVSRCINCDGVGTLTCTTCQ
        R +D+ QN V  L        S  +G   PV      D +        C  C G G   C  C GTG   +E    E   E ++C  C+G+G   C  C 
Subjt:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDE--KEVSRCINCDGVGTLTCTTCQ

Query:  G
        G
Subjt:  G

Sequences

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CDS sequence

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ATGACAGTAGCACCTTCGCTTTCCCGCCTCCATTCTCCATTTCTGTATTGTCCTCTCAAGCCAACTTCATCTACCTCTTTATCAGTCACATTCTCTAGAAATCAACGATC
GCCACCATCATATCCACGCATCAGAGCAATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTTGGGCTGGTGAGTGTTGCCGTTGGAATAGGTATTCCGGTCTTCT
ACGAAACCCAAATTGATAATGCGGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCAGTGGTTCAGGAGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTG
ACCGTAGAACTTGGTGGAGATGAAAAAGAAGTCTCCCGGTGTATTAACTGTGATGGTGTTGGCACATTGACGTGTACTACATGTCAGGGCTCTGGAATTCAACCTCGATA
CCTTGATCGCAGAGAATTTAAAGATGATGATTGA

mRNA sequence

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CTTACTGGGCTTTTGGGTTACATGGGCTGAGAAAGGAAGGCCCAAAGCAGCTTCTTTTTTTTTTTGACGACGACAGGAAGTTGGATGAGTGGTGGGTCTGTAGTAGAGCA
GAGGCAGCCAGTAACGGATATCCAAAATCCTGGATTGCGTGGTGAAGCTTTGTAGCTTTGAAACAAACCACAGCCTCAAGTGTTTTCTTTAGGAATTAGGACTGAGACTG
ACTTTCTTTTTCTTTCTGATTCGGAGCTCTCAGAGGCAAAGGAATTGAGTCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCCCGCCTCCATTCTCCATTTCTG
TATTGTCCTCTCAAGCCAACTTCATCTACCTCTTTATCAGTCACATTCTCTAGAAATCAACGATCGCCACCATCATATCCACGCATCAGAGCAATAGATCTTGACCAAAA
CACGGTGGTGGCACTTTCAGTTGGGCTGGTGAGTGTTGCCGTTGGAATAGGTATTCCGGTCTTCTACGAAACCCAAATTGATAATGCGGCAAAGCGTGAAAATACTCAGC
CCTGCTTTCCCTGCAGTGGTTCAGGAGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACCGTAGAACTTGGTGGAGATGAAAAAGAAGTCTCCCGGTGTATT
AACTGTGATGGTGTTGGCACATTGACGTGTACTACATGTCAGGGCTCTGGAATTCAACCTCGATACCTTGATCGCAGAGAATTTAAAGATGATGATTGAAGCCCTGCAGA
ACCAAACCCGGCAACATGACAGATTCGATTTTGTGTTTAATTTGATGGCTTGAAATTGGCTTGAACCTTGTTAGTTCAATTGAATCGAAGAGCTGGGTAACTTCTACCAA
GCACTTCTTTTTGGTAACGCGCATTCTTCTAATGTATATCTGTGGTTAATAATACAAACAACATTGTAAAAGGAGAGAAGAATTAACTGTACTATCCCAAGATTATGAAT
TCATCTCTATTCACTGTCAGTGAAATCAGAAATGGGGGATCAAACTCAATCTGATAATCACAAGCACTTTTTTTTCATACTTTTTCCGTGCATTCTAATGTATAAGAATA
TCTGCGGCTAATAATACAAACAAAATTGTAAGAGGAG

Protein sequence

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MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNV
TVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

PI0020188 (gene) of Melon (PI 482460) v1 genome