CuGenDBv2

Gene ID	PI0020190
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	60S ribosomal protein L13a
Genome location	chr05:16527743..16529740
RNA-Seq Expression	PI0020190
Synteny	PI0020190
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004133995.1 60S ribosomal protein L13a-2 [Cucumis sativus]

2.4e-107

97.09

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYE+KKQL KLR+KAEK A+EKLGPQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_008450411.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo]

3.3e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

4.8e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022999881.1 60S ribosomal protein L13a-4 [Cucurbita maxima]

1.1e-107

97.57

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_038906567.1 60S ribosomal protein L13a-4 [Benincasa hispida]

6.3e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPY+KMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYERKKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL54 Uncharacterized protein

1.6e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A1S3C555 60S ribosomal protein L13a-4

1.6e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A5A7SQ28 60S ribosomal protein L13a-4

1.6e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1HHD3 60S ribosomal protein L13a-4

2.3e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1KEC1 60S ribosomal protein L13a-4

5.2e-108

97.57

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLKAYEGVPPPYDK+K+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYE+KKQLNKLRIKAEK AEEKLGPQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

3.4e-96

83.5

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKERSQ  YERKKQLNKLR+KAE+ A+EKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9FKC0 60S ribosomal protein L13a-4

2.8e-103

88.83

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YERKKQLNKLR+KAEK AEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9LRX8 60S ribosomal protein L13a-2

1.8e-102

90.29

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQA YERKKQL KLR KAEK AEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

Q9SFU1 60S ribosomal protein L13a-1

5.4e-102

87.38

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YERKKQL+KLR KAEK AEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9SVR0 60S ribosomal protein L13a-3

4.1e-102

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ  YERKKQLNKLR KAEK AEE+LG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

3.8e-103

87.38

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YERKKQL+KLR KAEK AEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

1.3e-103

90.29

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQA YERKKQL KLR KAEK AEEKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

AT4G13170.1 Ribosomal protein L13 family protein

2.9e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ  YERKKQLNKLR KAEK AEE+LG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

2.0e-104

88.83

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Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YERKKQLNKLR+KAEK AEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

2.0e-104

88.83

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Query:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YERKKQLNKLR+KAEK AEEKLG QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Sequences

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CDS sequence

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ATGGTATCCGGTTCCGGTATCTGTGCTAAGCGCGTCGTCGTTGACGCCAGGCATCACATGTTGGGAAGGCTTTCTTCCATTATCGCCAAAGAGCTTCTCAATGGTCAGAA
AGTTGTGGTCGTCCGGTGCGAGGAGATCTGCATCTCCGGTGGATTGGTACGCCAAAAGATGAAGTACATGCGTTTCTTGAGGAAGCGAATGAACACCAAGCCTTCTCATG
GCCCCATTCACTTCCGTGCTCCCGCTAAGATCCTGTGGCGCACCATTCGTGGGATGATTCCCCATAAAACTAAGCGTGGTGCGGCGGCGCTTGCCCGTTTGAAGGCGTAC
GAGGGTGTTCCTCCTCCGTACGATAAGATGAAGAGGATGGTCATCCCTGATGCCCTCAAGGTCTTGAGGCTTCAAGCTGGACATAAGTACTGCTTATTGGGCAGACTCTC
TTCGGAGGTTGGATGGAACCACTATGATACCATCAAGGAACTCGAGAGGAAGAGAAAGGAAAGATCCCAGGCTGCATATGAGAGAAAGAAGCAGTTAAATAAGCTGAGGA
TTAAGGCCGAGAAGGCTGCTGAGGAGAAGCTTGGCCCCCAACTTGAAGTTATTGCTCCTATCAAATACTAA

mRNA sequence

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AACTCCAACCATTTCCCTCACAGAGAAGAAGCAGAAGAAGACGATAGCCGCTCGAGGCTTTTGCACAGACAAACAACAAGAAGATGGTATCCGGTTCCGGTATCTGTGCT
AAGCGCGTCGTCGTTGACGCCAGGCATCACATGTTGGGAAGGCTTTCTTCCATTATCGCCAAAGAGCTTCTCAATGGTCAGAAAGTTGTGGTCGTCCGGTGCGAGGAGAT
CTGCATCTCCGGTGGATTGGTACGCCAAAAGATGAAGTACATGCGTTTCTTGAGGAAGCGAATGAACACCAAGCCTTCTCATGGCCCCATTCACTTCCGTGCTCCCGCTA
AGATCCTGTGGCGCACCATTCGTGGGATGATTCCCCATAAAACTAAGCGTGGTGCGGCGGCGCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCTCCGTACGATAAG
ATGAAGAGGATGGTCATCCCTGATGCCCTCAAGGTCTTGAGGCTTCAAGCTGGACATAAGTACTGCTTATTGGGCAGACTCTCTTCGGAGGTTGGATGGAACCACTATGA
TACCATCAAGGAACTCGAGAGGAAGAGAAAGGAAAGATCCCAGGCTGCATATGAGAGAAAGAAGCAGTTAAATAAGCTGAGGATTAAGGCCGAGAAGGCTGCTGAGGAGA
AGCTTGGCCCCCAACTTGAAGTTATTGCTCCTATCAAATACTAATTTGTGATTTTGATCTCAGAAACAGGGATACTGGAGAATTGAGTTGCAGTTGAATTTCATTTTTCA
ATTTTGATAACATCTATCTCTTTATTAGTAGACCATGATACATCTCTGTATGCTTCTAGAATTCTTCAGTTTAGTCAAGTTTTTGATACTTTTTGGTTATGCGTGTCCAG
TAGATTCACGATGCCTGTTTAGTCCAAGTAAAAATGTTTGATTCCTTTGCTATGCATATCGTTGTGTCTGAACTCTGCAGTTGATTCTCATGGATTGGCTTGAAAAATTA
GTCGTTTTTGGTTCCAAACCTTCATGAACTGGATTCTTATTAGGCGTCCTACTACTAGCATTCTTTCGAACATTTTGCTTTTAATTTCTTGTTCTCTAATTCAAATTGTG
AAGTGGGGATGTCTTTGGTTCATATGATGCGATGGCAATGGCTCGACCTTAAGAT

Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLNKLRIKAEKAAEEKLGPQLEVIAPIKY

PI0020190 (gene) of Melon (PI 482460) v1 genome