; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020201 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020201
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLeucine-rich repeat (LRR) family protein
Genome locationchr01:16610217..16611711
RNA-Seq ExpressionPI0020201
SyntenyPI0020201
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]6.6e-3141.58Show/hide
Query:  VFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFP
        +FY A +N +E   E+  K V F  +AINALY L N+   +G +   +P  R  ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I P
Subjt:  VFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIPCSLCNQMALNRMITFHDHK
        TRHDSTI++E  MLLY      + N  ++    +++W++ P GA PF    + L +KA P L     + +   +C    L+R IT H +K
Subjt:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIPCSLCNQMALNRMITFHDHK
KAA0049609.1 transposase [Cucumis melo var. makuwa]1.0e-3151.75Show/hide
Query:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML
        +  + V F  E IN LYDLPND     GQ  +V       ++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-3951.46Show/hide
Query:  FYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFP
        FY  K N  +  + I  +   FN E IN LY+ PNDAE LGQ  V   T+ + +EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFP
Subjt:  FYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIP
        T +DSTI+++ T++LYCIM KK +NL ++I  +IL+WM  PK AMPFPS +E LC+K +P L       IP
Subjt:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIP
TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.0e-3151.75Show/hide
Query:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML
        +  + V F  E IN LYDLPND     GQ  +V       ++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]6.8e-2847.97Show/hide
Query:  SVFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKI
        S+FY AK +++E  + +  K VSF  E IN LY L ND ++   Q  +  PT+  +R  +++IAW GA W  T T   QLYPHQLTTEA+VWL FIKKKI
Subjt:  SVFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKI

Query:  FPTRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMP
         P  +DST+ +E  +LLYC M K+  NLG ++  + L  MR  KGA P
Subjt:  FPTRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMP
TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase4.9e-3251.75Show/hide
Query:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML
        +  + V F  E IN LYDLPND     GQ  +V       ++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
A0A5A7V6M5 Gag/pol protein1.1e-3951.46Show/hide
Query:  FYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFP
        FY  K N  +  + I  +   FN E IN LY+ PNDAE LGQ  V   T+ + +EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFP
Subjt:  FYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIP
        T +DSTI+++ T++LYCIM KK +NL ++I  +IL+WM  PK AMPFPS +E LC+K +P L       IP
Subjt:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIP
A0A5D3CVL7 Uncharacterized protein4.9e-3251.75Show/hide
Query:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML
        +  + V F  E IN LYDLPND     GQ  +V       ++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTML

Query:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
        LYCI  KK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  LYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVK
A0A5D3CW17 Uncharacterized protein3.2e-3141.58Show/hide
Query:  VFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFP
        +FY A +N +E   E+  K V F  +AINALY L N+   +G +   +P  R  ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I P
Subjt:  VFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIPCSLCNQMALNRMITFHDHK
        TRHDSTI++E  MLLY      + N  ++    +++W++ P GA PF    + L +KA P L     + +   +C    L+R IT H +K
Subjt:  TRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIPCSLCNQMALNRMITFHDHK
A0A5D3DES7 Uncharacterized protein3.3e-2847.97Show/hide
Query:  SVFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKI
        S+FY AK +++E  + +  K VSF  E IN LY L ND ++   Q  +  PT+  +R  +++IAW GA W  T T   QLYPHQLTTEA+VWL FIKKKI
Subjt:  SVFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETL-GQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKI

Query:  FPTRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMP
         P  +DST+ +E  +LLYC M K+  NLG ++  + L  MR  KGA P
Subjt:  FPTRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMP
SwissProt top hitse value%identityAlignment
Q9XIL9 Pollen-specific leucine-rich repeat extensin-like protein 34.4e-0636.21Show/hide
Query:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIP--STPPSPIISPRHSPIPHILSPINVLNLSPRP--------
        P    +PPP V  P   V   PPP  +  P   P+   PP V +     PPP HS P P  S PP P   P HSP P + SP   ++  P P        
Subjt:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIP--STPPSPIISPRHSPIPHILSPINVLNLSPRP--------

Query:  --PTPLPTKSNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISPHHPSEEDASPAI----RVSPPPP
          P P P KS  P P  + PLLP  +S+     P+    P T ++ VE  P  PSEE   P        SPPPP
Subjt:  --PTPLPTKSNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISPHHPSEEDASPAI----RVSPPPP
Arabidopsis top hitse value%identityAlignment
AT2G15880.1 Leucine-rich repeat (LRR) family protein3.2e-0736.21Show/hide
Query:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIP--STPPSPIISPRHSPIPHILSPINVLNLSPRP--------
        P    +PPP V  P   V   PPP  +  P   P+   PP V +     PPP HS P P  S PP P   P HSP P + SP   ++  P P        
Subjt:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIP--STPPSPIISPRHSPIPHILSPINVLNLSPRP--------

Query:  --PTPLPTKSNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISPHHPSEEDASPAI----RVSPPPP
          P P P KS  P P  + PLLP  +S+     P+    P T ++ VE  P  PSEE   P        SPPPP
Subjt:  --PTPLPTKSNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISPHHPSEEDASPAI----RVSPPPP
AT3G19020.1 Leucine-rich repeat (LRR) family protein1.6e-0631.3Show/hide
Query:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIPSTPPSPIISPRHSPIPHILSPINVLNLSPRPPTPL---PTK
        P   S PPP    P   V   PPP  I  P   P+   PP V    S  PPP HS P P   P P   P HSP P + SP   ++ SP PP+P+   P  
Subjt:  PAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIPSTPPSPIISPRHSPIPHILSPINVLNLSPRPPTPL---PTK

Query:  SNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISP-----HHPSEEDASPAIRVSPPPPP---PAVDTAKNVDDPHVKDNTPILNEVGETAS-
           P P+   PL P          P        +T V   +P       PS+ + SP  + SP P P   P V+      +P V+   P  +E   ++S 
Subjt:  SNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISP-----HHPSEEDASPAIRVSPPPPP---PAVDTAKNVDDPHVKDNTPILNEVGETAS-

Query:  LAHTPNAQPSTVPGEDEDFGDLLGSFVCKP
         +  P+   +  P ED D GD   +F+  P
Subjt:  LAHTPNAQPSTVPGEDEDFGDLLGSFVCKP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGTCAAAGTTGTAAAAAGTCCACTGATCTTCACATTACCCGTTCTTCTTCGTTTGAGCTCTGTTTTCTACGTGGCTAAACTCAATGCTGACGAGTTTAGTAT
GGAAATCAGTGGTAAGACAGTCAGCTTCAACGCGGAGGCCATCAACGCTTTATATGATTTGCCCAATGATGCTGAAACGCTTGGGCAAATATACGTGGTTAGCCCCACAA
GAAGGATGACCCGTGAAGCGTTGGAAGTAATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGCG
AGCGTGTGGCTTTTTTTCATAAAAAAGAAGATCTTCCCAACACGCCATGATAGCACTATTAACTTAGAGTCAACGATGCTACTCTATTGTATAATGACGAAGAAGCGCGT
CAACCTTGGCGATCTGATAGCCACATCCATTCTGTCCTGGATGCGAGCTCCTAAGGGCGCCATGCCCTTCCCATCCACCATTGAAGCCCTCTGCGTTAAGGCCATGCCAT
TCCTCTGTGCCATCAATTCAATTCCAATCCCATGCAGTTTGTGCAACCAAATGGCTTTGAATCGCATGATAACTTTCCATGACCACAAAGAAATGGAAAGGCGAGCAAAG
ACTTTGGGTGACACACCTGAAGGTATGGCCCAAGCAGAACGCAAGAGGAAGTCACCAGCCGCCGCATCAACCCCTCCACCGAAAGTAAAAAAACCAAGGGTTGATGTGGC
GAAGCAGCCACCACCACTGAAGATCATCCACCCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACAAGTCCAAAACAAATCCAGCATCTCTCCGCCTCCTAGGCATTCTT
CGCCCATTCCATCCACACCACCTTCACCCATAATCTCTCCCCGTCATTCACCTATCCCTCACATTCTATCCCCCATCAACGTCCTCAACCTCTCCCCACGACCGCCTACC
CCTCTGCCCACAAAATCAAATGAACCTTCTCCTCGGCGAACAGCGCCCCTTTTGCCTCTCATCCTTTCGACCATCATGGATCTCGCCCCACTTCGCCATAACCAGCCCAC
GACCGCCACTGAGGTCGTTGAGATTTCCCCCCACCATCCATCAGAAGAGGATGCCTCACCAGCCATCAGGGTCTCACCACCACCACCACCGCCTGCTGTGGATACAGCCA
AAAATGTTGATGACCCACACGTTAAGGACAACACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTTGGCGCATACCCCCAACGCCCAACCTTCTACCGTGCCAGGA
GAAGATGAAGATTTTGGCGATCTGTTAGGGTCCTTTGTGTGTAAGCCAGTGTTTGATTATTTTGATCAAGTATTGGCTCACCAAGTTGACCAGGCGACGCAACTCCAATC
TTTGCAAACTTCAATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGTCAAAGTTGTAAAAAGTCCACTGATCTTCACATTACCCGTTCTTCTTCGTTTGAGCTCTGTTTTCTACGTGGCTAAACTCAATGCTGACGAGTTTAGTAT
GGAAATCAGTGGTAAGACAGTCAGCTTCAACGCGGAGGCCATCAACGCTTTATATGATTTGCCCAATGATGCTGAAACGCTTGGGCAAATATACGTGGTTAGCCCCACAA
GAAGGATGACCCGTGAAGCGTTGGAAGTAATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGCG
AGCGTGTGGCTTTTTTTCATAAAAAAGAAGATCTTCCCAACACGCCATGATAGCACTATTAACTTAGAGTCAACGATGCTACTCTATTGTATAATGACGAAGAAGCGCGT
CAACCTTGGCGATCTGATAGCCACATCCATTCTGTCCTGGATGCGAGCTCCTAAGGGCGCCATGCCCTTCCCATCCACCATTGAAGCCCTCTGCGTTAAGGCCATGCCAT
TCCTCTGTGCCATCAATTCAATTCCAATCCCATGCAGTTTGTGCAACCAAATGGCTTTGAATCGCATGATAACTTTCCATGACCACAAAGAAATGGAAAGGCGAGCAAAG
ACTTTGGGTGACACACCTGAAGGTATGGCCCAAGCAGAACGCAAGAGGAAGTCACCAGCCGCCGCATCAACCCCTCCACCGAAAGTAAAAAAACCAAGGGTTGATGTGGC
GAAGCAGCCACCACCACTGAAGATCATCCACCCCTCATCCCGCCCAATCAAGCGAGCTCCCCCACAAGTCCAAAACAAATCCAGCATCTCTCCGCCTCCTAGGCATTCTT
CGCCCATTCCATCCACACCACCTTCACCCATAATCTCTCCCCGTCATTCACCTATCCCTCACATTCTATCCCCCATCAACGTCCTCAACCTCTCCCCACGACCGCCTACC
CCTCTGCCCACAAAATCAAATGAACCTTCTCCTCGGCGAACAGCGCCCCTTTTGCCTCTCATCCTTTCGACCATCATGGATCTCGCCCCACTTCGCCATAACCAGCCCAC
GACCGCCACTGAGGTCGTTGAGATTTCCCCCCACCATCCATCAGAAGAGGATGCCTCACCAGCCATCAGGGTCTCACCACCACCACCACCGCCTGCTGTGGATACAGCCA
AAAATGTTGATGACCCACACGTTAAGGACAACACACCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTTGGCGCATACCCCCAACGCCCAACCTTCTACCGTGCCAGGA
GAAGATGAAGATTTTGGCGATCTGTTAGGGTCCTTTGTGTGTAAGCCAGTGTTTGATTATTTTGATCAAGTATTGGCTCACCAAGTTGACCAGGCGACGCAACTCCAATC
TTTGCAAACTTCAATCAATTAG
Protein sequenceShow/hide protein sequence
MEMVKVVKSPLIFTLPVLLRLSSVFYVAKLNADEFSMEISGKTVSFNAEAINALYDLPNDAETLGQIYVVSPTRRMTREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEA
SVWLFFIKKKIFPTRHDSTINLESTMLLYCIMTKKRVNLGDLIATSILSWMRAPKGAMPFPSTIEALCVKAMPFLCAINSIPIPCSLCNQMALNRMITFHDHKEMERRAK
TLGDTPEGMAQAERKRKSPAAASTPPPKVKKPRVDVAKQPPPLKIIHPSSRPIKRAPPQVQNKSSISPPPRHSSPIPSTPPSPIISPRHSPIPHILSPINVLNLSPRPPT
PLPTKSNEPSPRRTAPLLPLILSTIMDLAPLRHNQPTTATEVVEISPHHPSEEDASPAIRVSPPPPPPAVDTAKNVDDPHVKDNTPILNEVGETASLAHTPNAQPSTVPG
EDEDFGDLLGSFVCKPVFDYFDQVLAHQVDQATQLQSLQTSIN