; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020291 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020291
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit B-3-like
Genome locationchr06:27139757..27141673
RNA-Seq ExpressionPI0020291
SyntenyPI0020291
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003956 - Transcription factor, NFYB/HAP3, conserved site
IPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065728.1 nuclear transcription factor Y subunit B-3-like [Cucumis melo var. makuwa]1.9e-9093.51Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG--------MTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDS ASS PNSAVAGNSGFFDGGGEFGGGMG        M MPPNVYGS+GPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG--------MTMPPNVYGSNGPRWDGPGFSTTGRPR

KAG6577523.1 Nuclear transcription factor Y subunit B-3, partial [Cucurbita argyrosperma subsp. sororia]5.7e-8789.67Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASSVPNSAV--------AGNSGFFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERT LASRDS+SS   +A         A NS FFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGF+TTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASSVPNSAV--------AGNSGFFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGFSTTGRPR

XP_004148262.1 nuclear transcription factor Y subunit B-3 [Cucumis sativus]2.5e-9094.02Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGG------GMGM--TMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDSASS  NSA AGNSGFFDGGGEFGG      GMGM  TMPPNVYGSNGPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGG------GMGM--TMPPNVYGSNGPRWDGPGFSTTGRPR

XP_008449032.2 PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis melo]1.6e-8991.01Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG------------MTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDS ASS PNSA AGNSGFFDGGGEFGGGMG            M MPPNVYGS+GPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG------------MTMPPNVYGSNGPRWDGPGFSTTGRPR

XP_038905070.1 nuclear transcription factor Y subunit B-3-like [Benincasa hispida]5.7e-8792.66Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGG QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEAS+KCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT-MPPNVYGSNGPRWDGPGFSTTGRPR
        K YLQRFREIEGERTTLASRDSA++  NSA A NS FFDGGGEFG GMGMT MPPNVYGSNGPRWDGPGF+TTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT-MPPNVYGSNGPRWDGPGFSTTGRPR

TrEMBL top hitse value%identityAlignment
A0A0A0L4U4 CBFD_NFYB_HMF domain-containing protein1.2e-9094.02Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGG------GMGM--TMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDSASS  NSA AGNSGFFDGGGEFGG      GMGM  TMPPNVYGSNGPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGG------GMGM--TMPPNVYGSNGPRWDGPGFSTTGRPR

A0A1S3BL47 nuclear transcription factor Y subunit B-3-like7.8e-9091.01Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG------------MTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDS ASS PNSA AGNSGFFDGGGEFGGGMG            M MPPNVYGS+GPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG------------MTMPPNVYGSNGPRWDGPGFSTTGRPR

A0A5A7VDK6 Nuclear transcription factor Y subunit B-3-like9.2e-9193.51Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG--------MTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERTTLASRDS ASS PNSAVAGNSGFFDGGGEFGGGMG        M MPPNVYGS+GPRWDGPGFSTTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDS-ASSVPNSAVAGNSGFFDGGGEFGGGMG--------MTMPPNVYGSNGPRWDGPGFSTTGRPR

A0A6J1F1D9 nuclear transcription factor Y subunit B-3-like2.3e-8691.11Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHD LLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASS----VPNSAVAGNSGFFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERT LASRDS+SS       +A A NS FFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGF+TTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASS----VPNSAVAGNSGFFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGFSTTGRPR

A0A6J1HQB9 nuclear transcription factor Y subunit B-3-like3.1e-8690.66Show/hide
Query:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
        MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKE VQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL
Subjt:  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPL

Query:  KLYLQRFREIEGERTTLASRDSASSVPNSAV----AGNSGFFDGGGEFGGGMG--MTMPPNVYGSNGPRWDGPGFSTTGRPR
        KLYLQRFREIEGERT LASRDS+SS   +A     A NS FFDGGGEFGGGMG  MTMPPNVYGSNGPRWDGPGF+TTGRPR
Subjt:  KLYLQRFREIEGERTTLASRDSASSVPNSAV----AGNSGFFDGGGEFGGGMG--MTMPPNVYGSNGPRWDGPGFSTTGRPR

SwissProt top hitse value%identityAlignment
O23310 Nuclear transcription factor Y subunit B-35.8e-5069.48Show/hide
Query:  MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP
        MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+P
Subjt:  MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP

Query:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGE-FGGGMGMTM
        LK+YLQ++RE+EGE+TT A R            G +G   GG   +GGGM  TM
Subjt:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGE-FGGGMGMTM

P25209 Nuclear transcription factor Y subunit B1.5e-4257.49Show/hide
Query:  ADSDNDSGGGYQKSPSP---------REHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLG
        A +    GGG  +S SP         RE DR LPIAN+ RIMKKA+P N KI+KDAKETVQECVSEFISF+T EASDKC  EKRKTINGDDLLWAMATLG
Subjt:  ADSDNDSGGGYQKSPSP---------REHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLG

Query:  FEDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSA---VAGNSGFFDGGGEFGG---GMGMTMP
        FEDY++PLK+YLQ++RE+EG+ + L ++ S  S+   A   V  +S   +G G+ G    GMG   P
Subjt:  FEDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSA---VAGNSGFFDGGGEFGG---GMGMTMP

Q69J40 Nuclear transcription factor Y subunit B-102.1e-4761.14Show/hide
Query:  MADSDNDSGG--GYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVD
        M DSDN+SGG     +  S RE DR LPIANV RIMK+ALP NAKISKDAKETVQECVSEFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDY+D
Subjt:  MADSDNDSGG--GYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVD

Query:  PLKLYLQRFREIEGERTTLASRDSASSVPNSAVAG--------------NSGFFDGGGEFGGGMGMTMPPNVYGS
        PLKLYL +FRE+EGE+   A+        +S  +G              N G+   GG  GGGM M M   +YGS
Subjt:  PLKLYLQRFREIEGERTTLASRDSASSVPNSAVAG--------------NSGFFDGGGEFGGGMGMTMPPNVYGS

Q75IZ7 Nuclear transcription factor Y subunit B-87.6e-5065.14Show/hide
Query:  MADSDNDSGGGYQ----KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDY
        M DSDNDSGG       +  SPRE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDY
Subjt:  MADSDNDSGGGYQ----KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDY

Query:  VDPLKLYLQRFREIEGER----TTLASRDSASSVP-----NSAVAGNSGFFDGGGEFGGGMGMTMPPNVYGSNGP
        VDPLK YL +FREIEGER    TT A   +AS+ P      +  AG    +   G   GGM M M   +YGS  P
Subjt:  VDPLKLYLQRFREIEGER----TTLASRDSASSVP-----NSAVAGNSGFFDGGGEFGGGMGMTMPPNVYGSNGP

Q9FGJ3 Nuclear transcription factor Y subunit B-21.9e-5361.98Show/hide
Query:  MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGF
        M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+QECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGF
Subjt:  MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGF

Query:  EDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT---------MPPNVYGSNGPRWDGPGFSTTGRPR
        EDYV+PLK+YLQRFREIEGERT L    +   V            DGGG +GGG GM             ++YG+ G   D  G + +GR R
Subjt:  EDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT---------MPPNVYGSNGPRWDGPGFSTTGRPR

Arabidopsis top hitse value%identityAlignment
AT2G38880.1 nuclear factor Y, subunit B17.8e-4263.5Show/hide
Query:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP
        MAD+  + +G G +   S RE DR LPIAN+ RIMKKALP N KI KDAK+TVQECVSEFISF+T EASDKC  EKRKT+NGDDLLWAMATLGFEDY++P
Subjt:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP

Query:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG
        LK+YL R+RE+EG+     S  S       A  G SG
Subjt:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG

AT2G38880.2 nuclear factor Y, subunit B17.8e-4263.5Show/hide
Query:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP
        MAD+  + +G G +   S RE DR LPIAN+ RIMKKALP N KI KDAK+TVQECVSEFISF+T EASDKC  EKRKT+NGDDLLWAMATLGFEDY++P
Subjt:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP

Query:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG
        LK+YL R+RE+EG+     S  S       A  G SG
Subjt:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG

AT2G38880.3 nuclear factor Y, subunit B17.8e-4263.5Show/hide
Query:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP
        MAD+  + +G G +   S RE DR LPIAN+ RIMKKALP N KI KDAK+TVQECVSEFISF+T EASDKC  EKRKT+NGDDLLWAMATLGFEDY++P
Subjt:  MADS-DNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP

Query:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG
        LK+YL R+RE+EG+     S  S       A  G SG
Subjt:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSG

AT4G14540.1 nuclear factor Y, subunit B34.1e-5169.48Show/hide
Query:  MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP
        MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+P
Subjt:  MADSDNDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDP

Query:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGE-FGGGMGMTM
        LK+YLQ++RE+EGE+TT A R            G +G   GG   +GGGM  TM
Subjt:  LKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGE-FGGGMGMTM

AT5G47640.1 nuclear factor Y, subunit B21.4e-5461.98Show/hide
Query:  MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGF
        M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+QECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGF
Subjt:  MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGF

Query:  EDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT---------MPPNVYGSNGPRWDGPGFSTTGRPR
        EDYV+PLK+YLQRFREIEGERT L    +   V            DGGG +GGG GM             ++YG+ G   D  G + +GR R
Subjt:  EDYVDPLKLYLQRFREIEGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMT---------MPPNVYGSNGPRWDGPGFSTTGRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCTCCATCTCCACGTGAACACGACAGACTCCTCCCGATTGCCAACGTCGGCCGGATCATGAAGAAAGC
TCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACG
AGAAACGAAAAACGATCAACGGCGATGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTCGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATT
GAAGGCGAGAGGACCACACTTGCCTCACGTGACTCCGCCTCCTCCGTCCCGAACTCCGCCGTAGCTGGTAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGG
GATGGGGATGACGATGCCTCCGAATGTTTATGGTTCTAATGGGCCGCGTTGGGATGGGCCCGGGTTTAGTACTACGGGTCGGCCCAGAAAACTCTGTATTGAAAATGAAG
ATATGGAAGCTACAATAATATATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCTCCATCTCCACGTGAACACGACAGACTCCTCCCGATTGCCAACGTCGGCCGGATCATGAAGAAAGC
TCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACG
AGAAACGAAAAACGATCAACGGCGATGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTCGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATT
GAAGGCGAGAGGACCACACTTGCCTCACGTGACTCCGCCTCCTCCGTCCCGAACTCCGCCGTAGCTGGTAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGG
GATGGGGATGACGATGCCTCCGAATGTTTATGGTTCTAATGGGCCGCGTTGGGATGGGCCCGGGTTTAGTACTACGGGTCGGCCCAGAAAACTCTGTATTGAAAATGAAG
ATATGGAAGCTACAATAATATATTTATAG
Protein sequenceShow/hide protein sequence
MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREI
EGERTTLASRDSASSVPNSAVAGNSGFFDGGGEFGGGMGMTMPPNVYGSNGPRWDGPGFSTTGRPRKLCIENEDMEATIIYL