; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr12:18461402..18462174
RNA-Seq ExpressionPI0020307
SyntenyPI0020307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]8.5e-0633.54Show/hide
Query:  EIRSPSNEVAELHKKISDKLAQVSFAK---TRKTIEAVKTTLKRKEEKKKM---LADLSEQVAELPAKMKALE--PERNLEVIAK------------ELE
        +IRS   E+AE  K+  + ++Q    K    R+      + +KR+ E +     L D ++ + E     K  +   +  LEV+ K             + 
Subjt:  EIRSPSNEVAELHKKISDKLAQVSFAK---TRKTIEAVKTTLKRKEEKKKM---LADLSEQVAELPAKMKALE--PERNLEVIAK------------ELE

Query:  DELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY
        DE  A  F+ EAIN LY+ P DAETP  + + +  +R A EALE IAW GA +++TPTGKY
Subjt:  DELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]1.2e-0454Show/hide
Query:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGA
        E E + F AEAIN LYDLPND E PG   +  PTR + +E L+ I WP A
Subjt:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGA

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]3.8e-0650Show/hide
Query:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY
        +++ F+ EAIN LYDLP DAETP Q  + +  +R AREAL+ I W G   ++T TG Y
Subjt:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-0451.79Show/hide
Query:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP
        E E   F+ E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P
Subjt:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-0451.85Show/hide
Query:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP
        E   F+ E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P
Subjt:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein4.1e-0633.54Show/hide
Query:  EIRSPSNEVAELHKKISDKLAQVSFAK---TRKTIEAVKTTLKRKEEKKKM---LADLSEQVAELPAKMKALE--PERNLEVIAK------------ELE
        +IRS   E+AE  K+  + ++Q    K    R+      + +KR+ E +     L D ++ + E     K  +   +  LEV+ K             + 
Subjt:  EIRSPSNEVAELHKKISDKLAQVSFAK---TRKTIEAVKTTLKRKEEKKKM---LADLSEQVAELPAKMKALE--PERNLEVIAK------------ELE

Query:  DELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY
        DE  A  F+ EAIN LY+ P DAETP  + + +  +R A EALE IAW GA +++TPTGKY
Subjt:  DELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY

A0A5A7U8H4 Uncharacterized protein6.0e-0554Show/hide
Query:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGA
        E E + F AEAIN LYDLPND E PG   +  PTR + +E L+ I WP A
Subjt:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGA

A0A5A7URT6 Uncharacterized protein1.9e-0650Show/hide
Query:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY
        +++ F+ EAIN LYDLP DAETP Q  + +  +R AREAL+ I W G   ++T TG Y
Subjt:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY

A0A5A7V6M5 Gag/pol protein7.8e-0551.79Show/hide
Query:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP
        E E   F+ E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P
Subjt:  ELEAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP

A0A5D3C3P6 Gag/pol protein7.8e-0551.85Show/hide
Query:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP
        E   F+ E IN LY+ PNDAE  GQ  V   T+ +A+EAL+V+AWPG   EV P
Subjt:  EAMSFSAEAINALYDLPNDAETPGQIYVDSPTRRMAREALEVIAWPGAAWEVTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGATCTTCAAGCCAACACCAAGACCAGATCAGAGTGCGTTCTGATGGCCCTGAATCAGAACGCCCTACATCGCGAGGAAGTGGCAAGCAAAGAACGCCACAGTA
CACCCACCTGAAGCATGGCAAAGGCAAGGTGTTACTTAAACCTCCGCCTGAAACATTTGACTTTTTCATGGAGGTGGAGGTTGACAATTTGGACAAGGAGGCGATGCTCG
ATTTTCTCAACGAGCGAATGAAAAAACGCGCACATCAAAAGGACAAAGGAAGTCGTCGCAGGAAGGACGAGCGGGAGCGAATGAGACTTGAGGAAACTCGAAAGGCGAAG
CGCACATTAGAAATACGCTCACCGTCTAACGAGGTCGCTGAGCTACACAAGAAGATATCTGACAAACTTGCACAAGTCTCGTTCGCCAAAACGAGGAAAACTATAGAGGC
GGTTAAGACTACCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTCGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCTGCGAAGATGAAAGCACTAGAGCCTGAGAGGA
ACCTCGAGGTGATCGCGAAAGAACTCGAGGATGAGCTGGAGGCGATGAGCTTCAGCGCGGAGGCTATCAACGCGTTATATGATTTACCCAATGATGCTGAAACGCCTGGG
CAGATATACGTAGATAGTCCTACGAGAAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGAGCCGCATGGGAGGTGACACCGACGGGGAAGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGATCTTCAAGCCAACACCAAGACCAGATCAGAGTGCGTTCTGATGGCCCTGAATCAGAACGCCCTACATCGCGAGGAAGTGGCAAGCAAAGAACGCCACAGTA
CACCCACCTGAAGCATGGCAAAGGCAAGGTGTTACTTAAACCTCCGCCTGAAACATTTGACTTTTTCATGGAGGTGGAGGTTGACAATTTGGACAAGGAGGCGATGCTCG
ATTTTCTCAACGAGCGAATGAAAAAACGCGCACATCAAAAGGACAAAGGAAGTCGTCGCAGGAAGGACGAGCGGGAGCGAATGAGACTTGAGGAAACTCGAAAGGCGAAG
CGCACATTAGAAATACGCTCACCGTCTAACGAGGTCGCTGAGCTACACAAGAAGATATCTGACAAACTTGCACAAGTCTCGTTCGCCAAAACGAGGAAAACTATAGAGGC
GGTTAAGACTACCTTAAAAAGGAAGGAAGAAAAGAAAAAGATGCTCGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCTGCGAAGATGAAAGCACTAGAGCCTGAGAGGA
ACCTCGAGGTGATCGCGAAAGAACTCGAGGATGAGCTGGAGGCGATGAGCTTCAGCGCGGAGGCTATCAACGCGTTATATGATTTACCCAATGATGCTGAAACGCCTGGG
CAGATATACGTAGATAGTCCTACGAGAAGGATGGCCCGTGAAGCGTTGGAGGTCATCGCATGGCCTGGAGCCGCATGGGAGGTGACACCGACGGGGAAGTATTAG
Protein sequenceShow/hide protein sequence
MVGSSSQHQDQIRVRSDGPESERPTSRGSGKQRTPQYTHLKHGKGKVLLKPPPETFDFFMEVEVDNLDKEAMLDFLNERMKKRAHQKDKGSRRRKDERERMRLEETRKAK
RTLEIRSPSNEVAELHKKISDKLAQVSFAKTRKTIEAVKTTLKRKEEKKKMLADLSEQVAELPAKMKALEPERNLEVIAKELEDELEAMSFSAEAINALYDLPNDAETPG
QIYVDSPTRRMAREALEVIAWPGAAWEVTPTGKY