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PI0020320 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020320
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposase
Genome locationchr04:15152389..15155630
RNA-Seq ExpressionPI0020320
SyntenyPI0020320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040896.1 transposase [Cucumis melo var. makuwa]3.2e-3055.8Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSG--------------------------
        MDC SDDHLSVG D DV   +  LET  +QRS+CG T MIHLTQIS+D NRLVV+YNERGEWIGEN TQM +S                           
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSG--------------------------

Query:  ---KLPLMTDQATIWKHARVGKDEEFINKEIEDIVVKI
           KLP   D+AT+WKHARVGKD EF+NKE+E+IV KI
Subjt:  ---KLPLMTDQATIWKHARVGKDEEFINKEIEDIVVKI

KAA0067725.1 uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa]3.5e-1369.84Show/hide
Query:  VGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS
        VG D+DV Q +  LET  +QRS+ G T MIHLTQIS+D NRLVV+YNERGEWIGENATQM +S
Subjt:  VGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS

TYK10636.1 uncharacterized protein E5676_scaffold315G001190 [Cucumis melo var. makuwa]1.1e-1747.83Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE
        +DC SDDHLSVG D DV Q +  LET  +Q+S+ G T MIHL QIS+D NRLVV+YNERGEWIGENATQ+ +      GK+  +    T+++  R+  DE
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE

Query:  EFINKEIEDIVVKIV
              + +  V+++
Subjt:  EFINKEIEDIVVKIV

TYK17918.1 uncharacterized protein E5676_scaffold306G002090 [Cucumis melo var. makuwa]7.3e-1931.03Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE
        +DC SDDHLSVG D DV Q +  LET  +Q+S+ G T MIHL QIS+D NRLVV+YNERGEWIGENATQ+ +      GK+  +    T+++  R+  DE
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE

Query:  --------------------------------------------------------------------EFINKEIED-----------------------
                                                                              + K+++D                       
Subjt:  --------------------------------------------------------------------EFINKEIED-----------------------

Query:  ----------------IVVKIVDAYTNLIGIIEEYAFMNPRQISSGLDRDENRARYMCNRL
                        I+  ++  Y +   I+EEYAFMNP QIS GL   ENRAR++CNRL
Subjt:  ----------------IVVKIVDAYTNLIGIIEEYAFMNPRQISSGLDRDENRARYMCNRL

TYK24359.1 uncharacterized protein E5676_scaffold205G001410 [Cucumis melo var. makuwa]1.4e-1766.67Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSGK
        MDC SDD+LSVG D D+ Q +  L+T  +QRS+CG T MIHLTQIS+D N LVV+YNE GEWIGENATQM+K  K
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSGK

TrEMBL top hitse value%identityAlignment
A0A5A7TFT2 Transposase1.5e-3055.8Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSG--------------------------
        MDC SDDHLSVG D DV   +  LET  +QRS+CG T MIHLTQIS+D NRLVV+YNERGEWIGEN TQM +S                           
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSG--------------------------

Query:  ---KLPLMTDQATIWKHARVGKDEEFINKEIEDIVVKI
           KLP   D+AT+WKHARVGKD EF+NKE+E+IV KI
Subjt:  ---KLPLMTDQATIWKHARVGKDEEFINKEIEDIVVKI

A0A5A7VPW2 DUF4218 domain-containing protein1.7e-1369.84Show/hide
Query:  VGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS
        VG D+DV Q +  LET  +QRS+ G T MIHLTQIS+D NRLVV+YNERGEWIGENATQM +S
Subjt:  VGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS

A0A5D3CJP2 Uncharacterized protein5.1e-1847.83Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE
        +DC SDDHLSVG D DV Q +  LET  +Q+S+ G T MIHL QIS+D NRLVV+YNERGEWIGENATQ+ +      GK+  +    T+++  R+  DE
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE

Query:  EFINKEIEDIVVKIV
              + +  V+++
Subjt:  EFINKEIEDIVVKIV

A0A5D3D2X4 Uncharacterized protein3.5e-1931.03Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE
        +DC SDDHLSVG D DV Q +  LET  +Q+S+ G T MIHL QIS+D NRLVV+YNERGEWIGENATQ+ +      GK+  +    T+++  R+  DE
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKS-----GKLPLMTDQATIWKHARVGKDE

Query:  --------------------------------------------------------------------EFINKEIED-----------------------
                                                                              + K+++D                       
Subjt:  --------------------------------------------------------------------EFINKEIED-----------------------

Query:  ----------------IVVKIVDAYTNLIGIIEEYAFMNPRQISSGLDRDENRARYMCNRL
                        I+  ++  Y +   I+EEYAFMNP QIS GL   ENRAR++CNRL
Subjt:  ----------------IVVKIVDAYTNLIGIIEEYAFMNPRQISSGLDRDENRARYMCNRL

A0A5D3DM41 Uncharacterized protein6.7e-1866.67Show/hide
Query:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSGK
        MDC SDD+LSVG D D+ Q +  L+T  +QRS+CG T MIHLTQIS+D N LVV+YNE GEWIGENATQM+K  K
Subjt:  MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGTAGTAGTGATGACCACCTCTCAGTTGGAGGCGACAATGATGTAGGCCAGTTTAATAGTATTTTAGAGACAATACCTAATCAAAGATCTGTCTGTGGTCTTAC
CGCTATGATTCATTTGACACAAATTAGTAATGATGTAAATCGATTGGTTGTTGAGTACAACGAACGTGGTGAATGGATTGGTGAAAATGCTACTCAAATGAACAAATCAG
GAAAATTACCACTGATGACCGATCAAGCTACCATTTGGAAACATGCTCGAGTGGGTAAAGACGAAGAATTCATAAATAAAGAGATCGAAGATATTGTAGTGAAAATTGTA
GATGCTTATACGAATCTGATTGGTATTATAGAGGAATATGCATTCATGAATCCTAGACAAATTTCAAGTGGTTTAGATAGGGACGAAAATAGAGCTCGATACATGTGCAA
TAGATTGGTATCAATCAAGAATAAGCTATTGATATGTTTGTTTAATTTCGGGATGGAGGAAAAAGTAATGTCAAAAGTAGGTTGTGGAATCGTGGATCGGGTCTATGTTT
TCCACTTAATAGTGGACCCAATCCACGAGTTCCATGAAGTCGTGGATCGGGTCCACGACTTCGAGACCAGGTGGCCTACCACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTGTAGTAGTGATGACCACCTCTCAGTTGGAGGCGACAATGATGTAGGCCAGTTTAATAGTATTTTAGAGACAATACCTAATCAAAGATCTGTCTGTGGTCTTAC
CGCTATGATTCATTTGACACAAATTAGTAATGATGTAAATCGATTGGTTGTTGAGTACAACGAACGTGGTGAATGGATTGGTGAAAATGCTACTCAAATGAACAAATCAG
GAAAATTACCACTGATGACCGATCAAGCTACCATTTGGAAACATGCTCGAGTGGGTAAAGACGAAGAATTCATAAATAAAGAGATCGAAGATATTGTAGTGAAAATTGTA
GATGCTTATACGAATCTGATTGGTATTATAGAGGAATATGCATTCATGAATCCTAGACAAATTTCAAGTGGTTTAGATAGGGACGAAAATAGAGCTCGATACATGTGCAA
TAGATTGGTATCAATCAAGAATAAGCTATTGATATGTTTGTTTAATTTCGGGATGGAGGAAAAAGTAATGTCAAAAGTAGGTTGTGGAATCGTGGATCGGGTCTATGTTT
TCCACTTAATAGTGGACCCAATCCACGAGTTCCATGAAGTCGTGGATCGGGTCCACGACTTCGAGACCAGGTGGCCTACCACGTAA
Protein sequenceShow/hide protein sequence
MDCSSDDHLSVGGDNDVGQFNSILETIPNQRSVCGLTAMIHLTQISNDVNRLVVEYNERGEWIGENATQMNKSGKLPLMTDQATIWKHARVGKDEEFINKEIEDIVVKIV
DAYTNLIGIIEEYAFMNPRQISSGLDRDENRARYMCNRLVSIKNKLLICLFNFGMEEKVMSKVGCGIVDRVYVFHLIVDPIHEFHEVVDRVHDFETRWPTT