CuGenDBv2

Gene ID	PI0020356
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein translocase subunit SecA
Genome location	chr09:5756640..5760487
RNA-Seq Expression	PI0020356
Synteny	PI0020356
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142815.1 uncharacterized protein LOC101208398 [Cucumis sativus]

1.8e-67

79.67

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRSI+RPLTRISRSHP SS TAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHF+                           PY WVPYTPGQP
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPN PNEGSVKRRNEKKRI+LHRAFIMSE+KKRKAQVQEA KKKL+MRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

XP_008466941.1 PREDICTED: uncharacterized protein LOC103504316 [Cucumis melo]

2.4e-67

79.12

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRSIVRPLTRISRSHP SS TAFPSAFTFSKPGFHLPSTGSVRTGDPWFPI NHF+                           PY WVPYTPGQP
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPNHPNEGSVKRRNEKKRI+LHRAFIMSE++KRKAQVQEA +KKL+MRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

XP_022132599.1 uncharacterized protein LOC111005424 [Momordica charantia]

9.8e-53

67.58

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLG+LRS+VRPLTR  RS PS+SLT FP+AFT  +P FHL S GSV T  PWFPIANHF+                           PY WV YTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPN PNEGSVKRRNEKKRI+L RAFI++EKKKRKAQ QEAKKKK+I RVERKMAAVARERAWA RLAELQ+LEEE+KKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]

1.1e-48

64.84

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRS +RPLTR   S P +SLT  PSAFT  K GF+L S G+V T  PWFPI+NHF                            PY WV YTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        I PN PNEGSVKRRNEKKRI+L RAFI++EKKKRKAQ+QEAKKKK+I RVERKMAAVARERAWA+RLAELQ+LEEEKKKSM+
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

XP_038890999.1 uncharacterized protein LOC120080411 [Benincasa hispida]

1.7e-60

75.27

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRSIVRPLTRISRS PS+SLT FPSAFT  KPGFHLPS  SVR   PWF IANHF+                           PY WVPYTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPNHPNEGSVKRRNEKKRI+LHRAFIM+EKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWA RLAELQKLEE KKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUQ0 Uncharacterized protein

8.9e-68

79.67

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRSI+RPLTRISRSHP SS TAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHF+                           PY WVPYTPGQP
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPN PNEGSVKRRNEKKRI+LHRAFIMSE+KKRKAQVQEA KKKL+MRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

A0A1S3CSD0 uncharacterized protein LOC103504316

1.2e-67

79.12

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRSIVRPLTRISRSHP SS TAFPSAFTFSKPGFHLPSTGSVRTGDPWFPI NHF+                           PY WVPYTPGQP
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPNHPNEGSVKRRNEKKRI+LHRAFIMSE++KRKAQVQEA +KKL+MRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

A0A6J1BTI2 uncharacterized protein LOC111005424

4.7e-53

67.58

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLG+LRS+VRPLTR  RS PS+SLT FP+AFT  +P FHL S GSV T  PWFPIANHF+                           PY WV YTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        ILPN PNEGSVKRRNEKKRI+L RAFI++EKKKRKAQ QEAKKKK+I RVERKMAAVARERAWA RLAELQ+LEEE+KKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

A0A6J1HFM5 uncharacterized protein LOC111463516

4.3e-46

62.09

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Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRS +RPLTR   S P +SLT  PSAF   K GF+L S G+V T  PWFPI+NHF                            PY WV YTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        I PN PNEGSVKRRNEKKRI+  RAFI++EKKKR+AQ+QEA KKK+I RVERKMAAVAR+RAWA RLAELQ+LE+EKKKSME
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

A0A6J1KV00 uncharacterized protein LOC111496683

5.4e-49

64.84

Show/hide

Query:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP
        MGLGILRS +RPLTR   S P +SLT  PSAFT  K GF+L S G+V T  PWFPI+NHF                            PY WV YTPG+P
Subjt:  MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYR--------------------------PYCWVPYTPGQP

Query:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME
        I PN PNEGSVKRRNEKKRI+L RAFI++EKKKRKAQ+QEAKKKK+I RVERKMAAVARERAWA+RLAELQ+LEEEKKKSM+
Subjt:  ILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51010.1 unknown protein

5.7e-35

52.15

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Query:  MGLGILRSIVRPLTR--ISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSV-RTGDPWFPIANHFYR----------------------------PYCWVPY
        MG G +RSI+RPL+R  +SR+  + S   F +    +KP       GS+     PW P+ANHF+                             PY +V Y
Subjt:  MGLGILRSIVRPLTR--ISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSV-RTGDPWFPIANHFYR----------------------------PYCWVPY

Query:  TPGQPILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSM
        TPGQPI  N+PNEGSVKRRN KKRI   RAFI+SEKKKR+A VQEAK+KK I +VERKMAAVAR+RAWA RL ELQ+LEEEKKKSM
Subjt:  TPGQPILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKAQVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSM

Sequences

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CDS sequence

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ATGGGGCTCGGAATCCTCAGATCCATTGTTCGACCCCTAACGAGGATCTCGCGATCACACCCTTCCTCTTCCCTAACAGCATTTCCATCAGCTTTCACTTTCTCTAAACC
AGGGTTTCATCTCCCTTCTACTGGTTCAGTCAGAACTGGAGATCCTTGGTTCCCAATTGCCAACCATTTTTACAGGCCATACTGTTGGGTACCGTATACCCCTGGCCAAC
CAATTCTTCCTAATCACCCCAACGAAGGAAGTGTGAAGAGAAGAAATGAGAAGAAACGCATTAAGTTGCACCGTGCATTTATTATGTCTGAAAAAAAGAAAAGGAAAGCT
CAAGTTCAAGAGGCAAAGAAGAAGAAACTTATCATGAGGGTGGAACGAAAAATGGCTGCAGTAGCAAGGGAAAGAGCATGGGCTGTAAGATTAGCCGAACTTCAAAAGCT
TGAAGAAGAGAAGAAAAAGTCCATGGAATAG

mRNA sequence

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Protein sequence

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MGLGILRSIVRPLTRISRSHPSSSLTAFPSAFTFSKPGFHLPSTGSVRTGDPWFPIANHFYRPYCWVPYTPGQPILPNHPNEGSVKRRNEKKRIKLHRAFIMSEKKKRKA
QVQEAKKKKLIMRVERKMAAVARERAWAVRLAELQKLEEEKKKSME

PI0020356 (gene) of Melon (PI 482460) v1 genome