CuGenDBv2

Gene ID	PI0020382
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	rRNA-processing protein EFG1
Genome location	chr06:3724204..3728012
RNA-Seq Expression	PI0020382
Synteny	PI0020382
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134104.1 rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]

1.8e-160

97.9

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN  ARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA TK  SS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_011650949.1 rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]

6.3e-158

97.31

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN  ARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQA TK  SS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_016899108.1 PREDICTED: rRNA-processing protein EFG1 [Cucumis melo]

3.7e-158

97.6

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA TK  SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]

1.7e-155

95.52

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NHQRQISAR LMPPPRPTKSFSSSAQAR+K  SSLRKSSTNHRAEFSTSSNTSG RSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]

6.1e-153

94.93

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+AQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+NH  QISAR LMPPPRPTKSFSSSAQAR+K  SSLRKSSTNHRAEFSTSSNTSG RSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SSN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7B4 rRNA-processing protein EFG1

8.5e-161

97.9

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVN  ARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQA TK  SS+RKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A1S4DT25 rRNA-processing protein EFG1

1.8e-158

97.6

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDEK   RQISARALMPPPRPTKSFSSSAQA TK  SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQV

A0A5A7U718 rRNA-processing protein EFG1

3.5e-146

97.39

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQFQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
        SDEADADDEWTDKSTREQA STSGKAASGMSSDEKNH  QISARALMPPPRPTKSFSSSAQA TK  SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGS

Query:  SNSSHTG
        SNSSHTG
Subjt:  SNSSHTG

A0A6J1D0D0 rRNA-processing protein EFG1

1.1e-144

91.62

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSK LAV+KKPKSVSLKNQIRSAERMLRK LPA+VR+AQEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTG DDSDMVDRR KLR+QIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFFL GSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDE+N QRQISARALMPPPRPTKSF SSAQAR K  SSLRK ST+ RAE STSSNTS GRSG SFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKARG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G415 rRNA-processing protein EFG1

3.8e-145

91.64

Show/hide

Query:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSK LAVEKKPKSVSLKNQIRSAERMLRKNLPAEVR+ QEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTGSDDSD VDRR KLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ GSS
Subjt:  EKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKAR
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDE+NHQR QISARALMPPPRPTKSF SSAQAR+K  SSLRK STN RAE S+SSNTS  RSG SFKAR
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQR-QISARALMPPPRPTKSFSSSAQARTK--SSLRKSSTNHRAEFSTSSNTSGGRSG-SFKAR

Query:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        GSSN SHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hits

e value

%identity

Alignment

A3LNR4 rRNA-processing protein EFG1

8.9e-06

29.8

Show/hide

Query:  GKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
        GKRR N  +    G+      +   LK +IR  ER+L+K+ LPA+VR   E+ ++ L+ + +        +++  +   ++FFE++K  R++++  K   
Subjt:  GKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKN-LPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR

Query:  APSGQFQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD
          S      DI     ++K    DL YV  FPK+EKY++L+    ++D VD
Subjt:  APSGQFQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGSDDSDMVD

A8N5J5 rRNA-processing protein EFG1

8.0e-07

30.51

Show/hide

Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQLSKLKE
        P    +K+ +R   R+L K NL A+ R   E++L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G  +   +  QL + + 
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQLSKLKE

Query:  DLEYVRFFPKTEKYVALF
        +L Y+  +PKT+KY++LF
Subjt:  DLEYVRFFPKTEKYVALF

P0CN34 rRNA-processing protein EFG1

5.2e-06

32.62

Show/hide

Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK
        P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
          L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

P0CN35 rRNA-processing protein EFG1

5.2e-06

32.62

Show/hide

Query:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK
        P    LK+ IR  +R+L K NL   +R + +++L  L        R  VERK   +  K+KFFER+K+ R I+R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLE-KLQRAPSGQFQDSDIADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR
          L YV  +P T+KY++LF      T  +D D    + KL+
Subjt:  EDLEYVRFFPKTEKYVALF------TGSDDSDMVDRRKKLR

Q09867 rRNA-processing protein efg1

4.6e-10

35.29

Show/hide

Query:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQFQDSDIADQLSK
        K P    LK +IR  ER+L+K NLPA +R   E+ L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-NLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQFQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL
         + DL Y++ +P   KYV+L+         + R ++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

3.7e-100

66.57

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Query:  MAHGGYGKRRVNP------TARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV        T+RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A EKKL+ L+KQQ+IH RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNP------TARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQF-QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD
        R IRRLEKL R+ SG + QD++I  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASGK+LEETGSEDD LLD+S+DD
Subjt:  RRIRRLEKLQRAPSGQF-QDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDD

Query:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTKSSLRKSSTNHRAEFSTSSNTSGGRSGSF
        FF+ GSSSDEADADDEWTDKST+E  SS SG+A S MSSDE+N Q+  S R LMPPPR          +R  S+ R+ S+  R E  +SSNTS  RS S 
Subjt:  FFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTKSSLRKSSTNHRAEFSTSSNTSGGRSGSF

Query:  KARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
         A   + SSHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  KARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)

9.8e-101

66.76

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Query:  MAHGGYGKRRVNP------TARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++  +KLE L+KQQ+ H+RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNP------TARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF
        R IRRLEKLQR  S    D DIA+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+DDF
Subjt:  RRIRRLEKLQRAPSGQFQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDF

Query:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTKSSLRKSSTNHRAEFSTSS--NTSGGRS-G
        F  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDE+N Q+Q S RALMPPP          QAR +S+ RK+    R E  +SS  NTS  RS  
Subjt:  FLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTKSSLRKSSTNHRAEFSTSS--NTSGGRS-G

Query:  SFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        S+ AR S+ +S++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  SFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

Sequences

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CDS sequence

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ATGGCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGACAGCCCGCCGATCGAAGGGTTTGGCTGTTGAAAAGAAGCCCAAGTCCGTCTCCCTTAAGAACCAAATTCG
ATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAG
TTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGACTTGAGAAACTTCAGCGTGCTCCATCTGGGCAG
TTTCAAGATTCAGATATTGCGGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCAAAAACAGAAAAATATGTAGCTTTATTTACTGGAAGTGA
TGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGCGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATG
ATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTCC
AGTACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCCCCTCCTCGTCCTACCAAATCATTTTC
AAGTTCAGCTCAAGCTCGGACAAAATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTA
AAGCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAA
CAGGTATGA

mRNA sequence

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AGAAAATTAGGTTTAGGTAGGAAGCATTAAGCAAGAAGGTAATGTCAGAAAAAAGGCGCTAAATAAATAGGGATTTGCACAAATTAAGAAGATCGTCCGGAAAATCCAAC
AAGTTAAAAAAAAGAAAAAGGAAAGAAAAAAAAATGTTGGGAGAGTGAAACAAAGAGAGATATCCCTCTCCGCCTCCGGTGCTATGAACACACCGGTGTGGTGCTGAGAG
CCTCTTCACAAAACCCTTGCCCTTCAAACAACGTTCTAGGGCACAATCTGACAATCACAATCCCCATCCGCCCCTCCTCTTCTCCCTTATCTCCTTCTTCCCCAACCATG
GCCCACGGTGGCTACGGCAAGCGCAGGGTCAACCCGACAGCCCGCCGATCGAAGGGTTTGGCTGTTGAAAAGAAGCCCAAGTCCGTCTCCCTTAAGAACCAAATTCGATC
TGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTG
AGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGACTTGAGAAACTTCAGCGTGCTCCATCTGGGCAGTTT
CAAGATTCAGATATTGCGGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCAAAAACAGAAAAATATGTAGCTTTATTTACTGGAAGTGATGA
TTCAGACATGGTTGATAGGAGAAAGAAGTTACGCGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATG
GGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTCCAGT
ACTTCCGGCAAAGCAGCATCTGGCATGTCTAGTGATGAAAAAAATCATCAGAGGCAGATTTCTGCCAGAGCCTTGATGCCCCCTCCTCGTCCTACCAAATCATTTTCAAG
TTCAGCTCAAGCTCGGACAAAATCTTCGTTGAGAAAATCTTCCACAAATCACAGGGCTGAGTTTTCTACATCCAGCAATACATCAGGTGGTAGAAGTGGATCTTTTAAAG
CTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCAGAAGAAAGAGGAGGCCAAAAAAGAAAAAACAACAG
GTATGATAGATTGGCCTCTGCGCGCTGTAACATTACAAGCCTAAACCTGACTTCTGAAGCGGATTCTGAATCTTAACCCTTCCATGAAAGTATCTTATCGGCTCTCGACC
CTTTTGGCAGGTTGCTGCATATATCAAGGGTTTGAGAAAAATTATTTTCTTTAGTTGTGTAATGATCTATGATCTTTTCTTGTGGCTCTTTTTTTTTCTTCTTGTTTTCT
TCCCTTTTGGATCATCAGAAAAATCTTCACAGGTTGTGGTTTTGGGTTGTTTTCTTTTCTATACGGTTGAAACTTGTATTGAAACCTTGAATCTTATATACCATGCTGTC
TCTGTGGCCTTTGTC

Protein sequence

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MAHGGYGKRRVNPTARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQ
FQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQAS
STSGKAASGMSSDEKNHQRQISARALMPPPRPTKSFSSSAQARTKSSLRKSSTNHRAEFSTSSNTSGGRSGSFKARGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQ
QV

PI0020382 (gene) of Melon (PI 482460) v1 genome