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PI0020454 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020454
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:13688938..13690232
RNA-Seq ExpressionPI0020454
SyntenyPI0020454
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-6759.32Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YIHWY NI++LYIT+      H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + +EVPP+TQTQS+  Y SP+MMMP FG  Y DS V      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRG+HNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

KAA0054357.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.5e-7066.21Show/hide
Query:  CNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNE
        CNTEPLLHNIDLR  +WSD VAHL+VRWQSRRRF+A G SIQQFD DVTQ YIH Y NITRLYITR      H LRSNN RLRDV D PQQVLDICNNNE
Subjt:  CNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNE

Query:  RYMEEIHYMYDIPILTGDVFEWKEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGR
        +YMEEIH MYD+PI                              SQTGYGSPM +MP FGAGYCDS+V TGY D+GVGPSS YMDV  S SYM  HGHGR
Subjt:  RYMEEIHYMYDIPILTGDVFEWKEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGR

Query:  GRGEHNEYLHYEAPTDVPD
        G GEHN+YL++EAP DV D
Subjt:  GRGEHNEYLHYEAPTDVPD

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.3e-6860.17Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YI+WY NI++LYIT+   +  H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + EEVPP+TQTQS+  Y SP+MMMP FG  Y DSEV      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRGEHNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-6759.32Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YIHWY NI++LYIT+      H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + +EVPP+TQTQS+  Y SP+MMMP FG  Y DS V      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRG+HNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-6772.31Show/hide
Query:  QSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDIPILTGDV----FEWKE
        +SRRRF+    SIQQFD DVTQ YIH Y NITRLYITR   +  H LRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PI+   V    F  +E
Subjt:  QSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDIPILTGDV----FEWKE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDV  STSYM  +GHGRG GEHNEYL++EAPTDV D
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-6759.32Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YIHWY NI++LYIT+      H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + +EVPP+TQTQS+  Y SP+MMMP FG  Y DS V      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRG+HNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

A0A5A7UIF6 Serine/threonine-protein phosphatase 7 long form-like protein2.2e-7066.21Show/hide
Query:  CNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNE
        CNTEPLLHNIDLR  +WSD VAHL+VRWQSRRRF+A G SIQQFD DVTQ YIH Y NITRLYITR      H LRSNN RLRDV D PQQVLDICNNNE
Subjt:  CNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNE

Query:  RYMEEIHYMYDIPILTGDVFEWKEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGR
        +YMEEIH MYD+PI                              SQTGYGSPM +MP FGAGYCDS+V TGY D+GVGPSS YMDV  S SYM  HGHGR
Subjt:  RYMEEIHYMYDIPILTGDVFEWKEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGR

Query:  GRGEHNEYLHYEAPTDVPD
        G GEHN+YL++EAP DV D
Subjt:  GRGEHNEYLHYEAPTDVPD

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-6860.17Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YI+WY NI++LYIT+   +  H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + EEVPP+TQTQS+  Y SP+MMMP FG  Y DSEV      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRGEHNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-6759.32Show/hide
Query:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN
        +CNTEPLLHNIDLR+ DWSD+VAHL++RW +RRRF ATG  I+QFD DVTQ YIHWY NI++LYIT+      H LRSNN RLR+VADDPQQVL+ICN+N
Subjt:  ECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNN

Query:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y
        E+YME IHYMYD+PI+   V   +    EP +L+EV  + +EVPP+TQTQS+  Y SP+MMMP FG  Y DS V      G GY +S  G SS+     Y
Subjt:  ERYMEEIHYMYDIPILTGDVFEWK----EP-ELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEV------GTGYNDSGVGPSSS-----Y

Query:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         D+ S  S  + HGHGRGRG+HNEYL+YE P  VP+
Subjt:  MDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein6.0e-6872.31Show/hide
Query:  QSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDIPILTGDV----FEWKE
        +SRRRF+    SIQQFD DVTQ YIH Y NITRLYITR   +  H LRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PI+   V    F  +E
Subjt:  QSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDIPILTGDV----FEWKE

Query:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD
         ELDEVYHNVEEVPP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDV  STSYM  +GHGRG GEHNEYL++EAPTDV D
Subjt:  PELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGRGRGEHNEYLHYEAPTDVPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACGATCATCTACTACCTAGATGAGCACACAGTTCACGAATGCAATACTGAGCCACTCTTGCACAATATTGACTTGAGATCCAGGGATTGGTCAGACAAGGTTGC
ACATTTGATCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGGATACATCCACTGGTATATTAATA
TTACGAGGCTCTACATCACTCGACAGGAGCACTTAAGAATACATCCACTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTCCTTGATATA
TGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTTTAACAGGGGACGTGTTCGAGTGGAAAGAACCTGAACTCGATGAAGTTTACCA
TAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCG
GTACAGGATATAATGATTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAGATCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGTGGAGAACAT
AACGAATATCTGCACTATGAAGCACCTACAGACGTTCCAGATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACGATCATCTACTACCTAGATGAGCACACAGTTCACGAATGCAATACTGAGCCACTCTTGCACAATATTGACTTGAGATCCAGGGATTGGTCAGACAAGGTTGC
ACATTTGATCGTGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTCAAGGATACATCCACTGGTATATTAATA
TTACGAGGCTCTACATCACTCGACAGGAGCACTTAAGAATACATCCACTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGTCCTTGATATA
TGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTTTAACAGGGGACGTGTTCGAGTGGAAAGAACCTGAACTCGATGAAGTTTACCA
TAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCG
GTACAGGATATAATGATTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAGATCATCAACTTCTTACATGCATGGACATGGACACGGACGCGGCCGTGGAGAACAT
AACGAATATCTGCACTATGAAGCACCTACAGACGTTCCAGATCCATAA
Protein sequenceShow/hide protein sequence
MQTIIYYLDEHTVHECNTEPLLHNIDLRSRDWSDKVAHLIVRWQSRRRFIATGASIQQFDQDVTQGYIHWYINITRLYITRQEHLRIHPLRSNNRRLRDVADDPQQVLDI
CNNNERYMEEIHYMYDIPILTGDVFEWKEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSGVGPSSSYMDVRSSTSYMHGHGHGRGRGEH
NEYLHYEAPTDVPDP