CuGenDBv2

Gene ID	PI0020470
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Retrotransposon protein
Genome location	chr11:23136469..23136795
RNA-Seq Expression	PI0020470
Synteny	PI0020470
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0019432 - triglyceride biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function) GO:0016746 - transferase activity, transferring acyl groups (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]

1.3e-27

61.11

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE  +GTEKEVL LKEMMLE+KK ++R+A+++REN SY+++EESGTS+ S+MK+KGKME+ +   +  T  +DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

KAA0063772.1 retrotransposon protein [Cucumis melo var. makuwa]

5.2e-29

62.96

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE   GTEKE++GLKEMMLE+KK VER+A++M+E+ SY+++EESGTSN SVMK+KGKME+ E   +   ++IDRSKYKKL+M +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

KAA0065941.1 retrotransposon protein [Cucumis melo var. makuwa]

3.6e-30

64.81

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE   GTEKE++GLKE+MLE+KK +ER+A++M+E+ SY++REESGTSN SVMKLKGKME+ E   +   ++IDRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF K
Subjt:  YRAEHFLK

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]

1.3e-27

61.11

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE  +GTEKEVL LKEMMLE+KK ++R+A+++REN SY+++EESGTS+ S+MK+KGKME+ +   +  T  +DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

XP_031745528.1 uncharacterized protein LOC116405915 [Cucumis sativus]

1.3e-27

62.96

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +Q+E+   GTEKE++GLKEM+LE+KK +ERMAED+REN SY+RREESGTS+ SVMKLKGK E+ +   +   +  DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TII1 Uncharacterized protein

6.2e-28

61.11

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE  +GTEKEVL LKEMMLE+KK ++R+A+++REN SY+++EESGTS+ S+MK+KGKME+ +   +  T  +DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

A0A5A7V689 Retrotransposon protein

2.5e-29

62.96

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE   GTEKE++GLKEMMLE+KK VER+A++M+E+ SY+++EESGTSN SVMK+KGKME+ E   +   ++IDRSKYKKL+M +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

A0A5D3CXP0 Uncharacterized protein

6.2e-28

61.11

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE  +GTEKEVL LKEMMLE+KK ++R+A+++REN SY+++EESGTS+ S+MK+KGKME+ +   +  T  +DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

A0A5D3DVI3 Uncharacterized protein

1.1e-27

60.19

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Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE  +GT+KEVL LKEMMLE+KK ++R A+++REN SY+++EESGTS+ S+MK+KGKME+ +   +  T+ +DRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF +
Subjt:  YRAEHFLK

A0A5D3E4T6 Retrotransposon protein

1.7e-30

64.81

Show/hide

Query:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV
        MA +QMEE   GTEKE++GLKE+MLE+KK +ER+A++M+E+ SY++REESGTSN SVMKLKGKME+ E   +   ++IDRSKYKKLEM +F+G+N E WV
Subjt:  MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWV

Query:  YRAEHFLK
        YRAEHF K
Subjt:  YRAEHFLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCGAGTAAGCAAATGGAGGAATGTTTCAAGGGTACTGAGAAAGAAGTTCTGGGCCTTAAGGAGATGATGCTCGAACTAAAGAAAGTAGTGGAAAGAATGGCTGAGGA
TATGAGGGAAAATAGTTCGTACCGAAGAAGAGAAGAATCGGGCACTTCCAATAGTTCAGTGATGAAACTCAAAGGAAAAATGGAGGATCAGGAAACTCCAATGGACAACA
TGACGAGTACCATTGACAGGAGCAAGTATAAAAAGCTTGAAATGTCATTGTTCATGGGAAAAAACCTCGAATTGTGGGTCTACAGAGCGGAACATTTTTTGAAATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASKQMEECFKGTEKEVLGLKEMMLELKKVVERMAEDMRENSSYRRREESGTSNSSVMKLKGKMEDQETPMDNMTSTIDRSKYKKLEMSLFMGKNLELWVYRAEHFLK

PI0020470 (gene) of Melon (PI 482460) v1 genome