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PI0020484 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020484
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:13440884..13442052
RNA-Seq ExpressionPI0020484
SyntenyPI0020484
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]1.6e-4875Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM+DF+AIRVHSEA  GS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+F+LA+R+A+LVEPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

KAA0049770.1 hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa]1.8e-4975.78Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM DF+AIRVHSEA GGS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+FDLA+R+A+L+EPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]7.7e-4874.8Show/hide
Query:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM
        YS+SGVG+IWVMWK+ RF F+  VVDEQFV+G LTDL  GV VEVFCVYASNSN++R LLW RLVE TS+WS  GVVM DF+AIRVHSEA GGS + G+M
Subjt:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM

Query:  EEFDLAVREAELVEPSVQGNWFTWTSK
        E+FDLA+R+A+LVEPSVQGNWFTWTSK
Subjt:  EEFDLAVREAELVEPSVQGNWFTWTSK

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]1.6e-4875Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM+DF+AIRVHSEA  GS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+F+LA+R+A+LVEPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]7.7e-4874.8Show/hide
Query:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM
        YS+SGVG+IWVMWK+ RF F+  VVDEQFV+G LTDL  GV VEVFCVYASNSN++R LLW RLVE TS+WS  GVVM DF+AIRVHSEA GGS + G+M
Subjt:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM

Query:  EEFDLAVREAELVEPSVQGNWFTWTSK
        E+FDLA+R+A+LVEPSVQGNWFTWTSK
Subjt:  EEFDLAVREAELVEPSVQGNWFTWTSK

TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein7.5e-4975Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM+DF+AIRVHSEA  GS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+F+LA+R+A+LVEPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

A0A5A7U3C2 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein8.9e-5075.78Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM DF+AIRVHSEA GGS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+FDLA+R+A+L+EPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

A0A5A7V275 Reverse transcriptase3.7e-4874.8Show/hide
Query:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM
        YS+SGVG+IWVMWK+ RF F+  VVDEQFV+G LTDL  GV VEVFCVYASNSN++R LLW RLVE TS+WS  GVVM DF+AIRVHSEA GGS + G+M
Subjt:  YSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGDM

Query:  EEFDLAVREAELVEPSVQGNWFTWTSK
        E+FDLA+R+A+LVEPSVQGNWFTWTSK
Subjt:  EEFDLAVREAELVEPSVQGNWFTWTSK

A0A5D3DXE4 Reverse transcriptase domain-containing protein7.5e-4975Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVGRIWVMWK+ RF F+  V+DEQFV+G LTDL SGV VEVFCVYASNSN++R LLW RLVEITS+WS  GVVM+DF+AIRVHSEA  GS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSK
        ME+F+LA+R+A+LVEPSVQGNWFTWTSK
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSK

A0A5D3DXQ8 Reverse transcriptase domain-containing protein3.7e-4872.52Show/hide
Query:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD
        SYS+SGVG+IWVMWK+  F F+  VVDEQFV+G LTDL SGV VEVF VYASNSN++R LLWCRLVEIT  WS  G+VM DF+AIRVHSEA GGS + G+
Subjt:  SYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVLGVVMDDFDAIRVHSEACGGSLVFGD

Query:  MEEFDLAVREAELVEPSVQGNWFTWTSKETK
        ME+FDLA+R+A+LVEPSVQGNWFTWTSK  +
Subjt:  MEEFDLAVREAELVEPSVQGNWFTWTSKETK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAAGAGGCGAATGTGAGAGAGGTTGTCCCCAGTAAAGGTGATGAGCTGGCTATTGTGACTTGTGGAGATGTTGTGTTGGAGTCCTTAGCAATTAGAGGAAGCTA
TAGTAGTAGTGGTGTTGGTCGTATTTGGGTGATGTGGAAACAGGGTAGATTCGATTTTACTCCTGGTGTGGTGGATGAGCAGTTTGTTTCTGGTGTGCTAACTGATTTGC
ATTCTGGGGTTACTGTGGAGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGATAGATGTTTGCTTTGGTGTCGATTAGTTGAGATCACTTCTAGTTGGTCGGTTTTG
GGTGTTGTTATGGATGATTTTGATGCTATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTAGTTTTTGGTGATATGGAGGAGTTTGATCTTGCGGTTCGTGAGGCTGA
GTTAGTTGAGCCTTCGGTCCAAGGTAACTGGTTCACTTGGACGAGTAAGGAAACAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAAGAGGCGAATGTGAGAGAGGTTGTCCCCAGTAAAGGTGATGAGCTGGCTATTGTGACTTGTGGAGATGTTGTGTTGGAGTCCTTAGCAATTAGAGGAAGCTA
TAGTAGTAGTGGTGTTGGTCGTATTTGGGTGATGTGGAAACAGGGTAGATTCGATTTTACTCCTGGTGTGGTGGATGAGCAGTTTGTTTCTGGTGTGCTAACTGATTTGC
ATTCTGGGGTTACTGTGGAGGTGTTTTGTGTTTATGCCTCTAACAGTAATGTGGATAGATGTTTGCTTTGGTGTCGATTAGTTGAGATCACTTCTAGTTGGTCGGTTTTG
GGTGTTGTTATGGATGATTTTGATGCTATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTAGTTTTTGGTGATATGGAGGAGTTTGATCTTGCGGTTCGTGAGGCTGA
GTTAGTTGAGCCTTCGGTCCAAGGTAACTGGTTCACTTGGACGAGTAAGGAAACAAAATAG
Protein sequenceShow/hide protein sequence
MQQEANVREVVPSKGDELAIVTCGDVVLESLAIRGSYSSSGVGRIWVMWKQGRFDFTPGVVDEQFVSGVLTDLHSGVTVEVFCVYASNSNVDRCLLWCRLVEITSSWSVL
GVVMDDFDAIRVHSEACGGSLVFGDMEEFDLAVREAELVEPSVQGNWFTWTSKETK