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PI0020502 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020502
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:18816170..18816822
RNA-Seq ExpressionPI0020502
SyntenyPI0020502
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

KAA0038122.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

KAA0047509.1 retrotransposon protein [Cucumis melo var. makuwa]7.1e-6662.23Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+V L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        IA+K+++D WSH  AKGLLNK F HYD+L YVF +D A  GRAE+F D+GSN P+G++ F      D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

KAA0048377.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

KAA0051960.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECL+ELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRAI GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

TrEMBL top hitse value%identityAlignment
A0A5A7U216 Retrotransposon protein3.4e-6662.23Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+V L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        IA+K+++D WSH  AKGLLNK F HYD+L YVF +D A  GRAE+F D+GSN P+G++ F      D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

A0A5A7U9V6 Retrotransposon protein1.7e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECL+ELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRAI GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

A0A5A7UME4 Retrotransposon protein2.9e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

A0A5D3CBF7 Retrotransposon protein2.9e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

A0A5D3DPR5 Retrotransposon protein1.7e-6561.17Show/hide
Query:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI
        M +SSR PKH WTK+E+  L+ECLVELV++GGWRSDNGTFRPGY + L +M+A ++PG NI A+TID +IK MKR F A++EM GP+CSGFGWNDE KCI
Subjt:  MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCI

Query:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT
        +A+K+++D WSH  AKGLLNK F HYD+L YVF +DRA  GRAE+F D+GSN P G++        D + P MYS GL+M PDD+M T
Subjt:  IAKKDLYDSWSHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCTTCAAGGACCCCAAAGCACCACTGGACGAAAGATGAGGATGTCGTCCTCATTGAATGTCTGGTTGAGTTGGTATCTTCCGGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCAGGACATAACATAACGGCTACGACAATAGATTGTCAAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGATGGGCCCATCGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCAAGAAAGACTTGTATGACAGTTGG
AGTCATTCAGTCGCAAAGGGGCTCCTAAACAAACCCTTTCCCCACTACGACGACCTTTGCTACGTCTTCGAAAGAGATCGTGCAATAGAAGGTCGAGCTGAAACCTTCGA
CGATGTTGGGTCGAACGTGCCTTCAGGTTTCGAAGGATTTCCCCACTATGATGAGAACGATATGGAGATCCCGACGATGTACAGTCAGGGCCTGGACATGTTACCTGACG
ACATAATGGGTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCTTCAAGGACCCCAAAGCACCACTGGACGAAAGATGAGGATGTCGTCCTCATTGAATGTCTGGTTGAGTTGGTATCTTCCGGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCCGGATACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCAGGACATAACATAACGGCTACGACAATAGATTGTCAAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGATGGGCCCATCGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCAAGAAAGACTTGTATGACAGTTGG
AGTCATTCAGTCGCAAAGGGGCTCCTAAACAAACCCTTTCCCCACTACGACGACCTTTGCTACGTCTTCGAAAGAGATCGTGCAATAGAAGGTCGAGCTGAAACCTTCGA
CGATGTTGGGTCGAACGTGCCTTCAGGTTTCGAAGGATTTCCCCACTATGATGAGAACGATATGGAGATCCCGACGATGTACAGTCAGGGCCTGGACATGTTACCTGACG
ACATAATGGGTACATGA
Protein sequenceShow/hide protein sequence
MATSSRTPKHHWTKDEDVVLIECLVELVSSGGWRSDNGTFRPGYHSHLQKMIAERMPGHNITATTIDCQIKTMKRAFQAISEMMGPSCSGFGWNDELKCIIAKKDLYDSW
SHSVAKGLLNKPFPHYDDLCYVFERDRAIEGRAETFDDVGSNVPSGFEGFPHYDENDMEIPTMYSQGLDMLPDDIMGT