; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020525 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020525
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscription factor bHLH160
Genome locationchr05:20511457..20514761
RNA-Seq ExpressionPI0020525
SyntenyPI0020525
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449406.1 PREDICTED: transcription factor bHLH100 [Cucumis melo]4.9e-5554.87Show/hide
Query:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSG-EALLLSNEIIG-SLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHN-EP
        MSLTPWEEHILIDE+NGIEE+E PL NWSNNNGELE+II+LSKSG EALLL NEIIG SLVED STLLGL+E++NI GV+ERENSKLFPP SIN HN EP
Subjt:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSG-EALLLSNEIIG-SLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHN-EP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------
        SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS                                                           
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------

Query:  --------------------------------------------KAEAEGLRIIGASTVSVS-HDHQILTSHLHIQV
                                                    KAE EGLRIIGASTVSVS HDHQILTSHLH+Q+
Subjt:  --------------------------------------------KAEAEGLRIIGASTVSVS-HDHQILTSHLHIQV

XP_022967618.1 transcription factor bHLH160 [Cucurbita maxima]5.8e-1651.68Show/hide
Query:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN
        M++TPWE  + L DENNG EE                   QL K GEA  L  E  GS+ E  + LLGLEE  +I G   REN + FPP ++N + EPS 
Subjt:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN

Query:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRII
            NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRSK       II
Subjt:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRII

XP_023553728.1 transcription factor bHLH160 [Cucurbita pepo subsp. pepo]7.6e-1637.16Show/hide
Query:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN
        M++TPWE  + L DENNG                  E+   L K GEA  L  EI GS+ E  + LLGLEE  +I G + REN+  FPP ++N + EPS 
Subjt:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN

Query:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-------------------------------------------------------------
            NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRS                                                             
Subjt:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-------------------------------------------------------------

Query:  -----------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV
                                     KAE EGLRIIGASTV VS  H  LTSHLH Q+
Subjt:  -----------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV

XP_031743831.1 transcription factor bHLH160 [Cucumis sativus]3.1e-5756.73Show/hide
Query:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDI---IQLSKSG-EALLLSNEIIGSLVEDYSTLLGLEEN-NNIDGVIERENSKLFPPSSINVHN
        MSL PWEEHILIDE+NGIEEKENPL NWSNNNGELE+I   IQ SKSG EALLL NEIIGSLVED STLLGLEEN ++IDGV+ERENSKLFPP+SINVHN
Subjt:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDI---IQLSKSG-EALLLSNEIIGSLVEDYSTLLGLEEN-NNIDGVIERENSKLFPPSSINVHN

Query:  -EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS--------------------------------------------------------
         EPSNSNK NAKKEEHNARERQRRL+LSHSYFSLRSLLPNARRS                                                        
Subjt:  -EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS--------------------------------------------------------

Query:  -------------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV
                                                   KAEAEGLRIIGASTVSVSHDHQILTSHLHIQ+
Subjt:  -------------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV

XP_038888939.1 transcription factor bHLH160 [Benincasa hispida]2.9e-3947.39Show/hide
Query:  MSLTPWEEHILIDENNGIEEKENP------LSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVH
        MSLT WEE+IL++ENNGI E ENP      LS+ SNNNGELE+  QLS++GEA LLS+EI+GSL+E  +TLLGLEE  NIDGV+E+E+SKL P S IN +
Subjt:  MSLTPWEEHILIDENNGIEEKENP------LSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVH

Query:  NEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS--------------------------------------------------------
         EPS +NK NAKKEEHNARERQRR++LSHSYFSLRSLLPNARRS                                                        
Subjt:  NEPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS--------------------------------------------------------

Query:  ------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV
                                            KA+AEGL IIGASTVSVSHDH  L+ HLHIQ+
Subjt:  ------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV

TrEMBL top hitse value%identityAlignment
A0A0A0KGG0 BHLH domain-containing protein2.6e-7088.64Show/hide
Query:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDI---IQLSKSG-EALLLSNEIIGSLVEDYSTLLGLEEN-NNIDGVIERENSKLFPPSSINVHN
        MSL PWEEHILIDE+NGIEEKENPL NWSNNNGELE+I   IQ SKSG EALLL NEIIGSLVED STLLGLEEN ++IDGV+ERENSKLFPP+SINVHN
Subjt:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDI---IQLSKSG-EALLLSNEIIGSLVEDYSTLLGLEEN-NNIDGVIERENSKLFPPSSINVHN

Query:  -EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQV
         EPSNSNK NAKKEEHNARERQRRL+LSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQ+
Subjt:  -EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQV

A0A1S3BLZ5 transcription factor bHLH1002.4e-5554.87Show/hide
Query:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSG-EALLLSNEIIG-SLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHN-EP
        MSLTPWEEHILIDE+NGIEE+E PL NWSNNNGELE+II+LSKSG EALLL NEIIG SLVED STLLGL+E++NI GV+ERENSKLFPP SIN HN EP
Subjt:  MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSG-EALLLSNEIIG-SLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHN-EP

Query:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------
        SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS                                                           
Subjt:  SNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-----------------------------------------------------------

Query:  --------------------------------------------KAEAEGLRIIGASTVSVS-HDHQILTSHLHIQV
                                                    KAE EGLRIIGASTVSVS HDHQILTSHLH+Q+
Subjt:  --------------------------------------------KAEAEGLRIIGASTVSVS-HDHQILTSHLHIQV

A0A6J1DXT5 transcription factor bHLH1607.9e-1135.61Show/hide
Query:  EENNNID---GVIERENSKLFP--PSSINVHN-------EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------
        E+  NID   G +EREN  LFP  P SIN +N       + SNSN  NAKKEEHNA+ER+RR++LS +YFSLRSLLPN+RRS                  
Subjt:  EENNNID---GVIERENSKLFP--PSSINVHN-------EPSNSNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS------------------

Query:  -------------------------------------------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSH
                                                                                 KAEAEG+ IIGASTVSVS DH  LT H
Subjt:  -------------------------------------------------------------------------KAEAEGLRIIGASTVSVSHDHQILTSH

Query:  LHIQV
        LH+Q+
Subjt:  LHIQV

A0A6J1HFM3 transcription factor bHLH1601.1e-1536.78Show/hide
Query:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN
        M++ PWE  + L DENNG                  E+   L K GEA  L  EI GS+ E  + LLGLEE  +I G   REN+  FPP ++N + EPS 
Subjt:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN

Query:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-------------------------------------------------------------
            NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRS                                                             
Subjt:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRS-------------------------------------------------------------

Query:  -----------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV
                                     KAE EGLRIIGASTV VS  H  LTSHLH Q+
Subjt:  -----------------------------KAEAEGLRIIGASTVSVSHDHQILTSHLHIQV

A0A6J1HVK8 transcription factor bHLH1602.8e-1651.68Show/hide
Query:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN
        M++TPWE  + L DENNG EE                   QL K GEA  L  E  GS+ E  + LLGLEE  +I G   REN + FPP ++N + EPS 
Subjt:  MSLTPWEE-HILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSN

Query:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRII
            NAKKEEHNARERQRR+ELS  YFSLRSLLPNARRSK       II
Subjt:  SNKENAKKEEHNARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGACACCATGGGAGGAGCATATATTGATTGATGAAAACAATGGAATTGAAGAGAAAGAAAATCCATTAAGTAATTGGAGTAATAATAATGGAGAATTAGAAGA
CATTATCCAATTATCAAAAAGTGGAGAAGCATTATTATTATCAAATGAAATAATTGGATCACTTGTGGAAGATTATTCAACATTATTGGGTTTGGAGGAAAATAATAATA
TTGATGGAGTTATAGAGAGAGAAAATTCAAAATTATTTCCACCATCATCCATTAATGTTCATAATGAACCCTCAAATTCAAATAAAGAAAATGCAAAGAAAGAAGAACAC
AATGCTAGAGAAAGACAAAGGAGGTTGGAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGCAGAAGCAGAAGGCCTAAGGAT
CATCGGTGCTTCCACAGTTTCTGTTTCTCATGACCATCAGATTCTTACTTCCCATTTGCATATTCAGGTATTTTTACTATTATATATTCTTTTTTTTTTAAAATACTTAT
GCTTTCTTTTTGTTATAGTCTCCATAAAAATATACTGGTTATGTCATGAGGGTACTTCCAAATTTATCCTACATAAATATTCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGACACCATGGGAGGAGCATATATTGATTGATGAAAACAATGGAATTGAAGAGAAAGAAAATCCATTAAGTAATTGGAGTAATAATAATGGAGAATTAGAAGA
CATTATCCAATTATCAAAAAGTGGAGAAGCATTATTATTATCAAATGAAATAATTGGATCACTTGTGGAAGATTATTCAACATTATTGGGTTTGGAGGAAAATAATAATA
TTGATGGAGTTATAGAGAGAGAAAATTCAAAATTATTTCCACCATCATCCATTAATGTTCATAATGAACCCTCAAATTCAAATAAAGAAAATGCAAAGAAAGAAGAACAC
AATGCTAGAGAAAGACAAAGGAGGTTGGAACTCTCTCACTCCTATTTTTCACTTCGCTCTTTGCTTCCCAATGCTAGAAGATCAAAGGCAGAAGCAGAAGGCCTAAGGAT
CATCGGTGCTTCCACAGTTTCTGTTTCTCATGACCATCAGATTCTTACTTCCCATTTGCATATTCAGGTATTTTTACTATTATATATTCTTTTTTTTTTAAAATACTTAT
GCTTTCTTTTTGTTATAGTCTCCATAAAAATATACTGGTTATGTCATGAGGGTACTTCCAAATTTATCCTACATAAATATTCTTTTTAA
Protein sequenceShow/hide protein sequence
MSLTPWEEHILIDENNGIEEKENPLSNWSNNNGELEDIIQLSKSGEALLLSNEIIGSLVEDYSTLLGLEENNNIDGVIERENSKLFPPSSINVHNEPSNSNKENAKKEEH
NARERQRRLELSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSVSHDHQILTSHLHIQVFLLLYILFFLKYLCFLFVIVSIKIYWLCHEGTSKFILHKYSF