CuGenDBv2

Gene ID	PI0020534
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DUF4283 domain-containing protein
Genome location	chr05:8545883..8546344
RNA-Seq Expression	PI0020534
Synteny	PI0020534
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR025558 - Domain of unknown function DUF4283

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]

4.8e-36

53.25

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+AS +GKPL+LDLATKERRRLS+ARVCVEL+    +P+E+TVN+RGV+FIVLV Y+ KPR CN C    HS+GK P+    +V +E  V
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT
        S+++P   +E     CG VVLESFKQLE+GE++ S     S        +D++T
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT

KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]

7.9e-39

55.84

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+ASA+GKP++LDLATKERRRLS+ARVCV+L+G   +P+E+TV++RGV+FIV + YEWKP  CN C    HS GKC +    +V +E  V
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT
        S+V PS G+      CGEVVLESFKQLEEGE++ S     S      G +DD+T
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT

KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

3.7e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

2.8e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]

3.7e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC83 uncharacterized protein LOC103499323

1.8e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase

2.3e-36

53.25

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+AS +GKPL+LDLATKERRRLS+ARVCVEL+    +P+E+TVN+RGV+FIVLV Y+ KPR CN C    HS+GK P+    +V +E  V
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT
        S+++P   +E     CG VVLESFKQLE+GE++ S     S        +D++T
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein

3.8e-39

55.84

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+ASA+GKP++LDLATKERRRLS+ARVCV+L+G   +P+E+TV++RGV+FIV + YEWKP  CN C    HS GKC +    +V +E  V
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT
        S+V PS G+      CGEVVLESFKQLEEGE++ S     S      G +DD+T
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYT

A0A5A7V507 DUF4283 domain-containing protein

1.8e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

A0A5D3DSG9 DUF4283 domain-containing protein

1.4e-36

61.83

Show/hide

Query:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV
        MELWT++G+AV+A A+GKP+SLDLATKERRRLS+ARVCVELEGG ++PSE+TVN+RGVEF V V YEWKPR CN C    HS+ KC + E     +   +
Subjt:  MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADV

Query:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE
         E V   G++     CGEVVLE+FKQLEEGE
Subjt:  SEVVPSTGNEQAIVACGEVVLESFKQLEEGE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01050.1 zinc ion binding;nucleic acid binding

6.1e-05

30.19

Show/hide

Query:  IASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADVSEVVPSTGNEQ
        IA  +G+PL +D+ T    +  FARVC+E+   +  P + TV + G  +   V YE   ++C+SC    H    CP+    +V   A+       T  ++
Subjt:  IASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSC----HSTGKCPQKETPQVQKEADVSEVVPSTGNEQ

Query:  AIVACG
        A+V  G
Subjt:  AIVACG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGTTGTGGACTAAGTCAGGTATTGCAGTCATTGCTAGTGCTATTGGTAAACCTCTATCTTTAGATTTGGCCACCAAGGAGAGACGTAGACTGTCGTTTGCTAGGGT
GTGTGTTGAATTAGAGGGGGGTGTTGATTTGCCTTCTGAGGTCACAGTAAATATGAGGGGTGTGGAATTTATTGTACTAGTTACCTATGAGTGGAAACCCCGTTTGTGTA
ATTCCTGTCATTCAACTGGTAAATGCCCTCAGAAGGAGACGCCTCAGGTGCAAAAGGAGGCAGATGTGAGCGAGGTAGTTCCTAGTACGGGTAATGAGCAGGCTATTGTT
GCTTGTGGGGAGGTGGTGTTAGAATCCTTTAAGCAGTTAGAGGAAGGTGAGCTTCAAGGTTCTTCGATTTGGCAGGTGTCATCGGCCAATAACGTTAGGGGTACGAAGGA
TGACTACACTCCTGACTCGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MELWTKSGIAVIASAIGKPLSLDLATKERRRLSFARVCVELEGGVDLPSEVTVNMRGVEFIVLVTYEWKPRLCNSCHSTGKCPQKETPQVQKEADVSEVVPSTGNEQAIV
ACGEVVLESFKQLEEGELQGSSIWQVSSANNVRGTKDDYTPDS

PI0020534 (gene) of Melon (PI 482460) v1 genome