; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020537 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020537
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr03:12788201..12789510
RNA-Seq ExpressionPI0020537
SyntenyPI0020537
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.2e-5930.07Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        + Q+AVN+F NSLGSQ IGYRELS ++ ++ QF+W EEC  ALQ PI+R+E+RRVLF+MDS KAPGP+GFS GF+KGAW+VVGE F +AV HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNATAITLI K  GAER+EDFRPISCCNV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  -------------------------------------------------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLM
                                                                                 K PQ F++HHRCEKV+LTHLTF DDLM
Subjt:  -------------------------------------------------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLM

Query:  IFCAAD-------TSWLQGGGVVCGL------------------------TLGC----------------------------------------------
        IFCAAD          LQ  G   GL                         +GC                                              
Subjt:  IFCAAD-------TSWLQGGGVVCGL------------------------TLGC----------------------------------------------

Query:  --REVRSFDR-------------------------------------------------------------------------------WERW-------
          + VRS  R                                                                               W  W       
Subjt:  --REVRSFDR-------------------------------------------------------------------------------WERW-------

Query:  ----WYMMLRV---------------------------------VELSEFISSDGEWRWPRVSRELLYLWERVQSVSPCLSIGDRWVWVPGHRGGFSISR
            W +  RV                                  +LS+FI  +GEW WPRVS EL+ LWERVQ VSPCLS+ D WVWVPG +GGFSI+ 
Subjt:  ----WYMMLRV---------------------------------VELSEFISSDGEWRWPRVSRELLYLWERVQSVSPCLSIGDRWVWVPGHRGGFSISR

Query:  AWKAIRPRSVRV
        AW+AI PR  RV
Subjt:  AWKAIRPRSVRV

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.8e-5546.79Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        +VQ+AVN+FRNSLGSQ IGYREL  ++ ++ QFRW EEC  ALQ PI+R+E+RRVLF+MDS KAPGP+GFS GFFKGAW+VV E F D V HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNAT ITLI KR GAE+ME+FRPISCCNV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  --------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAAD
                                        K PQ FK+HHRCEKV+LTHLTF DDLMIFCAAD
Subjt:  --------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAAD

KAA0063934.1 uncharacterized protein E6C27_scaffold616G00740 [Cucumis melo var. makuwa]7.8e-5935.93Show/hide
Query:  VNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNA
        VN+FRNSLGS  IGYRELS ++ ++ QFRW EEC  ALQ PI+++E+RRVLF+MDS KAPGP+GFS GFFKG W+VVGE F DAV HFFETCYLP  VNA
Subjt:  VNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNA

Query:  TAITLITKRCGAERMEDFRPISCCNVVY------------------------------------------------------------------------
        TAITLI KR GAERME+FRPISC NV+Y                                                                        
Subjt:  TAITLITKRCGAERMEDFRPISCCNVVY------------------------------------------------------------------------

Query:  ------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWERW---
              K PQ F++HH CEK +LTHLTF DDLMIF  AD              S L  G V           +    LG  E     V    R   W   
Subjt:  ------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWERW---

Query:  ----------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV------------
                  W  +    E   F   DG  W                                  W    RV R      +L+  ER+            
Subjt:  ----------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV------------

Query:  -----------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI
                         Q+VSPCLS+ DRWVWV G +GGFSI+ +W+AIRPR  RV      G G   S +LFV   ++G  W+ ++
Subjt:  -----------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI

TYK11300.1 uncharacterized protein E5676_scaffold1827G00050 [Cucumis melo var. makuwa]1.4e-6036.18Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        +VQ+AVN+FRNSLGS  IGYRELS ++ ++ QFRW EEC  ALQ PI+++E+RRVLF+MDS KAPGP+GFS GFFKG W+VVGE F DAV HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNATAITLI KR GAERME+FRPISC NV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  -----------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWE
                   K PQ F++HH CEK +LTHLTF DDLMIF  AD              S L  G V           +    LG  E     V    R  
Subjt:  -----------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWE

Query:  RW-------------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV-------
         W             W  +    E   F   DG  W                                  W    RV R      +L+  ER+       
Subjt:  RW-------------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV-------

Query:  ----------------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI
                              Q+VSPCLS+ DRWVWV G +GGFSI+ +W+AIRPR  RV      G G   S +LFV   ++G  W+ ++
Subjt:  ----------------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI

TYK26641.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]2.5e-5735.22Show/hide
Query:  GYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAE
        GYREL+ ++ ++ QFRW E+C  ALQ PI+RDE+RRVLF+MD+ KAPGP+GFS GFFKG W VVGE F DAV HFFETCYLP+ VNATAITLI KR GAE
Subjt:  GYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAE

Query:  RMEDFRPISCCNVVY--------------------------------------------------------------------------------KPPQC
        RMEDFRPISCCNV+Y                                                                                K PQ 
Subjt:  RMEDFRPISCCNVVY--------------------------------------------------------------------------------KPPQC

Query:  FKYHHRCEKVRLTHLTFTDDLMIFCAADTS-----------WLQGGGV---VCGLTLGCREVRSFD----------RWERWWYMMLRVVELSEFISS---
        F +HHRCEKV+L HLTF DDLMIFCAAD S           W+  G +     GL L    +RS D          R   W+  +L      + I S   
Subjt:  FKYHHRCEKVRLTHLTFTDDLMIFCAADTS-----------WLQGGGV---VCGLTLGCREVRSFD----------RWERWWYMMLRVVELSEFISS---

Query:  -------------------------DGEWR------------WPRVSRELL---YLWE-----------------------------------RV-----
                                    WR            W  V   +L    LWE                                   RV     
Subjt:  -------------------------DGEWR------------WPRVSRELL---YLWE-----------------------------------RV-----

Query:  --------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRVCCGVGEIFSGILF---VLDLLFGIGWALVI
                Q VSPC+S+ DRWVWV G +GGFSI+ AW+ IRPR  RV       ++G+L+    + + F  GW L I
Subjt:  --------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRVCCGVGEIFSGILF---VLDLLFGIGWALVI

TrEMBL top hitse value%identityAlignment
A0A5A7TZS0 Reverse transcriptase domain-containing protein5.8e-6030.07Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        + Q+AVN+F NSLGSQ IGYRELS ++ ++ QF+W EEC  ALQ PI+R+E+RRVLF+MDS KAPGP+GFS GF+KGAW+VVGE F +AV HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNATAITLI K  GAER+EDFRPISCCNV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  -------------------------------------------------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLM
                                                                                 K PQ F++HHRCEKV+LTHLTF DDLM
Subjt:  -------------------------------------------------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLM

Query:  IFCAAD-------TSWLQGGGVVCGL------------------------TLGC----------------------------------------------
        IFCAAD          LQ  G   GL                         +GC                                              
Subjt:  IFCAAD-------TSWLQGGGVVCGL------------------------TLGC----------------------------------------------

Query:  --REVRSFDR-------------------------------------------------------------------------------WERW-------
          + VRS  R                                                                               W  W       
Subjt:  --REVRSFDR-------------------------------------------------------------------------------WERW-------

Query:  ----WYMMLRV---------------------------------VELSEFISSDGEWRWPRVSRELLYLWERVQSVSPCLSIGDRWVWVPGHRGGFSISR
            W +  RV                                  +LS+FI  +GEW WPRVS EL+ LWERVQ VSPCLS+ D WVWVPG +GGFSI+ 
Subjt:  ----WYMMLRV---------------------------------VELSEFISSDGEWRWPRVSRELLYLWERVQSVSPCLSIGDRWVWVPGHRGGFSISR

Query:  AWKAIRPRSVRV
        AW+AI PR  RV
Subjt:  AWKAIRPRSVRV

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein8.7e-5646.79Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        +VQ+AVN+FRNSLGSQ IGYREL  ++ ++ QFRW EEC  ALQ PI+R+E+RRVLF+MDS KAPGP+GFS GFFKGAW+VV E F D V HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNAT ITLI KR GAE+ME+FRPISCCNV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  --------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAAD
                                        K PQ FK+HHRCEKV+LTHLTF DDLMIFCAAD
Subjt:  --------------------------------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAAD

A0A5A7V9M6 Uncharacterized protein3.8e-5935.93Show/hide
Query:  VNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNA
        VN+FRNSLGS  IGYRELS ++ ++ QFRW EEC  ALQ PI+++E+RRVLF+MDS KAPGP+GFS GFFKG W+VVGE F DAV HFFETCYLP  VNA
Subjt:  VNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNA

Query:  TAITLITKRCGAERMEDFRPISCCNVVY------------------------------------------------------------------------
        TAITLI KR GAERME+FRPISC NV+Y                                                                        
Subjt:  TAITLITKRCGAERMEDFRPISCCNVVY------------------------------------------------------------------------

Query:  ------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWERW---
              K PQ F++HH CEK +LTHLTF DDLMIF  AD              S L  G V           +    LG  E     V    R   W   
Subjt:  ------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWERW---

Query:  ----------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV------------
                  W  +    E   F   DG  W                                  W    RV R      +L+  ER+            
Subjt:  ----------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV------------

Query:  -----------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI
                         Q+VSPCLS+ DRWVWV G +GGFSI+ +W+AIRPR  RV      G G   S +LFV   ++G  W+ ++
Subjt:  -----------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI

A0A5D3CIW1 Uncharacterized protein6.9e-6136.18Show/hide
Query:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP
        +VQ+AVN+FRNSLGS  IGYRELS ++ ++ QFRW EEC  ALQ PI+++E+RRVLF+MDS KAPGP+GFS GFFKG W+VVGE F DAV HFFETCYLP
Subjt:  MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLP

Query:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------
          VNATAITLI KR GAERME+FRPISC NV+Y                                                                   
Subjt:  TEVNATAITLITKRCGAERMEDFRPISCCNVVY-------------------------------------------------------------------

Query:  -----------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWE
                   K PQ F++HH CEK +LTHLTF DDLMIF  AD              S L  G V           +    LG  E     V    R  
Subjt:  -----------KPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADT-------------SWLQGGGV-----------VCGLTLGCRE-----VRSFDRWE

Query:  RW-------------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV-------
         W             W  +    E   F   DG  W                                  W    RV R      +L+  ER+       
Subjt:  RW-------------WYMMLRVVELSEFISSDG-EWR---------------------------------W---PRVSRE-----LLYLWERV-------

Query:  ----------------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI
                              Q+VSPCLS+ DRWVWV G +GGFSI+ +W+AIRPR  RV      G G   S +LFV   ++G  W+ ++
Subjt:  ----------------------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRV----CCGVGEIFSGILFVLDLLFGIGWALVI

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase1.2e-5735.22Show/hide
Query:  GYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAE
        GYREL+ ++ ++ QFRW E+C  ALQ PI+RDE+RRVLF+MD+ KAPGP+GFS GFFKG W VVGE F DAV HFFETCYLP+ VNATAITLI KR GAE
Subjt:  GYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAE

Query:  RMEDFRPISCCNVVY--------------------------------------------------------------------------------KPPQC
        RMEDFRPISCCNV+Y                                                                                K PQ 
Subjt:  RMEDFRPISCCNVVY--------------------------------------------------------------------------------KPPQC

Query:  FKYHHRCEKVRLTHLTFTDDLMIFCAADTS-----------WLQGGGV---VCGLTLGCREVRSFD----------RWERWWYMMLRVVELSEFISS---
        F +HHRCEKV+L HLTF DDLMIFCAAD S           W+  G +     GL L    +RS D          R   W+  +L      + I S   
Subjt:  FKYHHRCEKVRLTHLTFTDDLMIFCAADTS-----------WLQGGGV---VCGLTLGCREVRSFD----------RWERWWYMMLRVVELSEFISS---

Query:  -------------------------DGEWR------------WPRVSRELL---YLWE-----------------------------------RV-----
                                    WR            W  V   +L    LWE                                   RV     
Subjt:  -------------------------DGEWR------------WPRVSRELL---YLWE-----------------------------------RV-----

Query:  --------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRVCCGVGEIFSGILF---VLDLLFGIGWALVI
                Q VSPC+S+ DRWVWV G +GGFSI+ AW+ IRPR  RV       ++G+L+    + + F  GW L I
Subjt:  --------QSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRVCCGVGEIFSGILF---VLDLLFGIGWALVI

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.4e-0424.8Show/hide
Query:  FFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATA
        ++++   +++    E+ + L      R  +E + +L  PIT  EI  ++ ++ + K+PGP+GF+A F++     +            +   LP      +
Subjt:  FFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATA

Query:  ITLITK-RCGAERMEDFRPISCCNV
        I LI K      + E+FRPIS  N+
Subjt:  ITLITK-RCGAERMEDFRPISCCNV

P11369 LINE-1 retrotransposable element ORF2 protein2.0e-0425.37Show/hide
Query:  NFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNAT
        +F++    +++    E+   L      +  ++ +  L +PI+  EI  V+ ++ + K+PGP+GFSA F+        + F + +       +   EV  T
Subjt:  NFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNAT

Query:  --------AITLITK-RCGAERMEDFRPISCCNV
                 ITLI K +    ++E+FRPIS  N+
Subjt:  --------AITLITK-RCGAERMEDFRPISCCNV

P14381 Transposon TX1 uncharacterized 149 kDa protein3.2e-0729.35Show/hide
Query:  LQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAERMEDFRPISCCNVVYK
        L+ PIT DE+ + L  M  +K+PG +G +  FF+  W+ +G  F+  +   F+   LP       ++L+ K+     ++++RP+S  +  YK
Subjt:  LQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAERMEDFRPISCCNVVYK

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.5e-1844.44Show/hide
Query:  LKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAERMEDFRPI
        +K++  FR  +     L A  +  EI   +FAM  +KAPGP+ F+A FF  +W VV +    AV  FF T +L    NATAITLI K  G +++  FRP+
Subjt:  LKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITLITKRCGAERMEDFRPI

Query:  SCCNVVYK
        SCC VVYK
Subjt:  SCCNVVYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGGTGGCAGTTAATTTTTTTCGGAATAGTTTGGGTTCCCAGGTGATTGGCTATAGGGAGCTCTCTTCGTTGCTGAAGGAGGTGTTTCAGTTTAGGTGGTTTGA
GGAGTGTATTCATGCTTTACAGGCTCCTATTACACGTGATGAGATTAGGAGGGTGTTATTTGCTATGGATAGTAGCAAGGCGCCTGGTCCTAATGGTTTTTCGGCGGGTT
TCTTCAAAGGAGCTTGGAATGTGGTTGGTGAGGGTTTTAATGATGCTGTGGCGCATTTCTTTGAGACTTGTTATCTGCCTACTGAGGTAAATGCTACTGCGATCACCCTC
ATTACCAAACGTTGTGGGGCTGAGCGTATGGAAGACTTTAGGCCTATCTCGTGTTGTAATGTGGTCTACAAGCCCCCTCAGTGTTTTAAGTATCATCATCGGTGTGAGAA
GGTTCGTTTGACCCATCTGACCTTCACTGATGATCTTATGATTTTTTGTGCTGCTGATACCTCTTGGTTGCAGGGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGTTGCA
GGGAGGTTCGATCATTCGACAGATGGGAGAGATGGTGGTATATGATGCTGCGTGTAGTAGAGCTTTCTGAGTTCATTAGCTCGGATGGTGAGTGGAGGTGGCCGAGGGTT
TCTAGGGAGTTACTTTATTTGTGGGAGAGGGTTCAGAGCGTCAGTCCTTGTCTGAGTATTGGGGATCGGTGGGTGTGGGTTCCGGGTCATCGGGGAGGATTTTCTATTTC
GAGAGCTTGGAAGGCTATTCGTCCTAGGAGTGTCAGGGTTTGTTGTGGGGTGGGGGAAATATTCTCAGGCATTCTTTTTGTGCTTGACTTGTTATTTGGGATAGGTTGGG
CACTCGTGATAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGGTGGCAGTTAATTTTTTTCGGAATAGTTTGGGTTCCCAGGTGATTGGCTATAGGGAGCTCTCTTCGTTGCTGAAGGAGGTGTTTCAGTTTAGGTGGTTTGA
GGAGTGTATTCATGCTTTACAGGCTCCTATTACACGTGATGAGATTAGGAGGGTGTTATTTGCTATGGATAGTAGCAAGGCGCCTGGTCCTAATGGTTTTTCGGCGGGTT
TCTTCAAAGGAGCTTGGAATGTGGTTGGTGAGGGTTTTAATGATGCTGTGGCGCATTTCTTTGAGACTTGTTATCTGCCTACTGAGGTAAATGCTACTGCGATCACCCTC
ATTACCAAACGTTGTGGGGCTGAGCGTATGGAAGACTTTAGGCCTATCTCGTGTTGTAATGTGGTCTACAAGCCCCCTCAGTGTTTTAAGTATCATCATCGGTGTGAGAA
GGTTCGTTTGACCCATCTGACCTTCACTGATGATCTTATGATTTTTTGTGCTGCTGATACCTCTTGGTTGCAGGGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGTTGCA
GGGAGGTTCGATCATTCGACAGATGGGAGAGATGGTGGTATATGATGCTGCGTGTAGTAGAGCTTTCTGAGTTCATTAGCTCGGATGGTGAGTGGAGGTGGCCGAGGGTT
TCTAGGGAGTTACTTTATTTGTGGGAGAGGGTTCAGAGCGTCAGTCCTTGTCTGAGTATTGGGGATCGGTGGGTGTGGGTTCCGGGTCATCGGGGAGGATTTTCTATTTC
GAGAGCTTGGAAGGCTATTCGTCCTAGGAGTGTCAGGGTTTGTTGTGGGGTGGGGGAAATATTCTCAGGCATTCTTTTTGTGCTTGACTTGTTATTTGGGATAGGTTGGG
CACTCGTGATAGGTTGA
Protein sequenceShow/hide protein sequence
MVQVAVNFFRNSLGSQVIGYRELSSLLKEVFQFRWFEECIHALQAPITRDEIRRVLFAMDSSKAPGPNGFSAGFFKGAWNVVGEGFNDAVAHFFETCYLPTEVNATAITL
ITKRCGAERMEDFRPISCCNVVYKPPQCFKYHHRCEKVRLTHLTFTDDLMIFCAADTSWLQGGGVVCGLTLGCREVRSFDRWERWWYMMLRVVELSEFISSDGEWRWPRV
SRELLYLWERVQSVSPCLSIGDRWVWVPGHRGGFSISRAWKAIRPRSVRVCCGVGEIFSGILFVLDLLFGIGWALVIG