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PI0020565 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020565
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionubiquitin-conjugating enzyme E2 22
Genome locationchr03:21852577..21856960
RNA-Seq ExpressionPI0020565
SyntenyPI0020565
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067923.1 ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa]3.7e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

TYK04292.1 ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa]3.7e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

XP_004142654.1 ubiquitin-conjugating enzyme E2 22 [Cucumis sativus]1.9e-3258.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKC-------IC------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +         +C            
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKC-------IC------------

Query:  ---------------HSIAFGMVAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                         +    V  APAA VKKES  LKMQQV  KKKIDARKK LKRL
Subjt:  ---------------HSIAFGMVAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

XP_008464614.1 PREDICTED: ubiquitin-conjugating enzyme E2 22 [Cucumis melo]3.7e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

XP_022925072.1 ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata]1.0e-3058.86Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALK---------YRSEKC------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL            S  C            
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALK---------YRSEKC------------

Query:  -----------ICHSIAFGMVAGAPAAA-VKKESEPLKMQQVDKKKKIDARKKRLKRL
                      S   G    APAAA VKK+  PLKMQ    KKKIDARKK LKRL
Subjt:  -----------ICHSIAFGMVAGAPAAA-VKKESEPLKMQQVDKKKKIDARKKRLKRL

TrEMBL top hitse value%identityAlignment
A0A0A0L0F5 UBC core domain-containing protein9.0e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKC-------IC------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +         +C            
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKC-------IC------------

Query:  ---------------HSIAFGMVAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                         +    V  APAA VKKES  LKMQQV  KKKIDARKK LKRL
Subjt:  ---------------HSIAFGMVAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

A0A1S3CLW5 ubiquitin-conjugating enzyme E2 221.8e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

A0A5A7VIJ3 Ubiquitin-conjugating enzyme E2 221.8e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

A0A5D3BZH9 Ubiquitin-conjugating enzyme E2 221.8e-3358.49Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL    +     ++                
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGM------------

Query:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL
                              V  APAA VKKES  LKMQQVD KKKIDARKK LKRL
Subjt:  ----------------------VAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL

A0A6J1EAT8 ubiquitin-conjugating enzyme E2 22-like4.9e-3158.86Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALK---------YRSEKC------------
        L VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNVDPTN SAL            S  C            
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALK---------YRSEKC------------

Query:  -----------ICHSIAFGMVAGAPAAA-VKKESEPLKMQQVDKKKKIDARKKRLKRL
                      S   G    APAAA VKK+  PLKMQ    KKKIDARKK LKRL
Subjt:  -----------ICHSIAFGMVAGAPAAA-VKKESEPLKMQQVDKKKKIDARKKRLKRL

SwissProt top hitse value%identityAlignment
A7SE05 Ubiquitin-conjugating enzyme E2 S1.8e-0962.22Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAK
        L  V+CLL+ P PE ALNE+AG+LLLE YD+Y++ AK++T IHAK
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAK

Q16763 Ubiquitin-conjugating enzyme E2 S1.5e-0835.94Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIH---AKPKPKFKMG-AISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAA
        L  ++CLL+ P PE ALNE+AGRLLLENY+EYA  A+L T IH     P  + + G A++  T A + DP                        GAP   
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIH---AKPKPKFKMG-AISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAA

Query:  VKKESEPLKMQQVDKKKKIDARKKRLKR
           E    K    ++ KK+ A+KK  K+
Subjt:  VKKESEPLKMQQVDKKKKIDARKKRLKR

Q76EZ2 Ubiquitin-conjugating enzyme E2 S-C5.1e-0938.4Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAAVKKE
        L  ++CLL+ P PE ALNE+AGRLLLENY+EYA  AKL T IHA            + +T    DPT+            C S +  +V+G    A K  
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAAVKKE

Query:  SEPLKMQQVDKKKKIDARKKRLKRL
         +  + +++  KKK D +K+ L+RL
Subjt:  SEPLKMQQVDKKKKIDARKKRLKRL

Q8AVU2 Ubiquitin-conjugating enzyme E2 S-B8.7e-0937.6Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAAVKKE
        L  ++CLL+ P PE ALNE+AGRLLLENY+EYA  A+L T IHA            + T+    DPT+            C S +  +V+G    A K  
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAAVKKE

Query:  SEPLKMQQVDKKKKIDARKKRLKRL
         +  + +++  KKK D +K+ L+RL
Subjt:  SEPLKMQQVDKKKKIDARKKRLKRL

Q9FF66 Ubiquitin-conjugating enzyme E2 229.9e-2955.63Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG
        L+VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNV  TN                +K  +           
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG

Query:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL
        +V  A A+ V    K+E+   K+Q    KKK+DARKK LKRL
Subjt:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL

Arabidopsis top hitse value%identityAlignment
AT5G05080.1 ubiquitin-conjugating enzyme 227.1e-3055.63Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG
        L+VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNV  TN                +K  +           
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG

Query:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL
        +V  A A+ V    K+E+   K+Q    KKK+DARKK LKRL
Subjt:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL

AT5G05080.2 ubiquitin-conjugating enzyme 227.1e-3055.63Show/hide
Query:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG
        L+VVRCLL+EPFPE ALNEQAG++LLENYDEYARHA+LYTGIHAKPKPKFK GAIS+STTALNV  TN                +K  +           
Subjt:  LAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAKLYTGIHAKPKPKFKMGAISKSTTALNVDPTNESA-------------LKYRSEKCICHSIAFG

Query:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL
        +V  A A+ V    K+E+   K+Q    KKK+DARKK LKRL
Subjt:  MVAGAPAAAV----KKESEPLKMQQVDKKKKIDARKKRLKRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACGAGATTTCACTTCTGTCTTCAATTTTGCTCGAGGTATCAACGAATGTCCGGGACAAGACATGAAGAAGAGATGCCAAATTTGGTCTCTACCTTGTAGTGCTGTAGC
GCTATGCAAGGCGATTGAATACTTAACTACGAATGCCCACCCTAGTCGTAATCTCTCCCCTCGTCTACTGAACTTGTTACAACCTAATTGTAATTACTTTTTCAAATTTC
TGGCCGTTGTTAGGTGTCTACTGGTTGAACCATTTCCAGAACCAGCTTTGAATGAACAAGCTGGCAGGCTGCTGCTTGAAAATTATGACGAGTATGCCAGACATGCCAAG
CTCTATACAGGAATCCATGCAAAACCAAAGCCAAAATTCAAGATGGGAGCCATTTCCAAATCCACAACCGCCCTCAATGTCGACCCGACAAATGAGTCGGCACTTAAATA
CAGATCTGAAAAATGCATCTGCCACAGCATTGCCTTTGGCATGGTGGCTGGAGCACCAGCAGCAGCGGTGAAGAAGGAAAGTGAACCTTTAAAAATGCAGCAGGTTGACA
AGAAGAAGAAGATAGATGCAAGAAAGAAAAGGTTGAAGAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
CCACGAGATTTCACTTCTGTCTTCAATTTTGCTCGAGGTATCAACGAATGTCCGGGACAAGACATGAAGAAGAGATGCCAAATTTGGTCTCTACCTTGTAGTGCTGTAGC
GCTATGCAAGGCGATTGAATACTTAACTACGAATGCCCACCCTAGTCGTAATCTCTCCCCTCGTCTACTGAACTTGTTACAACCTAATTGTAATTACTTTTTCAAATTTC
TGGCCGTTGTTAGGTGTCTACTGGTTGAACCATTTCCAGAACCAGCTTTGAATGAACAAGCTGGCAGGCTGCTGCTTGAAAATTATGACGAGTATGCCAGACATGCCAAG
CTCTATACAGGAATCCATGCAAAACCAAAGCCAAAATTCAAGATGGGAGCCATTTCCAAATCCACAACCGCCCTCAATGTCGACCCGACAAATGAGTCGGCACTTAAATA
CAGATCTGAAAAATGCATCTGCCACAGCATTGCCTTTGGCATGGTGGCTGGAGCACCAGCAGCAGCGGTGAAGAAGGAAAGTGAACCTTTAAAAATGCAGCAGGTTGACA
AGAAGAAGAAGATAGATGCAAGAAAGAAAAGGTTGAAGAGATTGTGA
Protein sequenceShow/hide protein sequence
PRDFTSVFNFARGINECPGQDMKKRCQIWSLPCSAVALCKAIEYLTTNAHPSRNLSPRLLNLLQPNCNYFFKFLAVVRCLLVEPFPEPALNEQAGRLLLENYDEYARHAK
LYTGIHAKPKPKFKMGAISKSTTALNVDPTNESALKYRSEKCICHSIAFGMVAGAPAAAVKKESEPLKMQQVDKKKKIDARKKRLKRL